Gene annotation
Transcriptome id Sobic.007G200300.1
Synonym Sb07g026790, SD2-5
Functional annotation lectin protein kinase family protein, putative, expressed
UniProt C5YI80
Pfam PF08276 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF80
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G32300 : S-domain-2 5
RAP-DB (Rice) LOC_Os04g23700.1 : lectin protein kinase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ92146 , KQK01458
Barley HORVU2Hr1G066280.8 , HORVU2Hr1G066280.6 , HORVU2Hr1G066280.7 , HORVU2Hr1G066280.4 , HORVU2Hr1G066280.5 , HORVU2Hr1G066280.2 , HORVU2Hr1G066280.3 , HORVU2Hr1G066280.1 , HORVU2Hr1G066280.10 , HORVU2Hr1G066280.11
Wheat TraesCS2B02G290100 , TraesCS2A02G271900 , TraesCS6A02G402100 , TraesCS6B02G444600 , TraesCS2B02G290100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G149000 - -
2 Sobic.002G280001 - -
3 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
5 Sobic.002G320700 expressed protein -
6 Sobic.004G081000 - -
7 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
8 Sobic.006G111400 nodulation receptor kinase precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
9 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
10 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
11 Sobic.003G281400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
12 Sobic.004G202750 - -
13 Sobic.009G182000 cysteine proteinase inhibitor precursor protein, putative, expressed -
14 Sobic.003G259000 - -
15 Sobic.001G361750 - -
16 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
17 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
18 Sobic.006G169600 expressed protein -
19 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
20 Sobic.009G147600 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic007G200300 Sobic007G200300 Sobic004G149000 Sobic004G149000 Sobic007G200300--Sobic004G149000 Sobic002G280001 Sobic002G280001 Sobic007G200300--Sobic002G280001 Sobic006G270300 Sobic006G270300 Sobic007G200300--Sobic006G270300 Sobic002G227100 Sobic002G227100 Sobic007G200300--Sobic002G227100 Sobic002G320700 Sobic002G320700 Sobic007G200300--Sobic002G320700 Sobic004G081000 Sobic004G081000 Sobic007G200300--Sobic004G081000 Sobic009G199900 Sobic009G199900 Sobic007G200300--Sobic009G199900 Sobic006G111400 Sobic006G111400 Sobic007G200300--Sobic006G111400 Sobic004G203600 Sobic004G203600 Sobic007G200300--Sobic004G203600 Sobic004G149000--Sobic007G200300 Sobic004G149000--Sobic004G081000 Sobic009G147600 Sobic009G147600 Sobic004G149000--Sobic009G147600 Sobic004G149000--Sobic002G227100 Sobic004G149000--Sobic002G280001 Sobic004G149000--Sobic002G320700 Sobic004G149000--Sobic006G270300 Sobic003G079600 Sobic003G079600 Sobic004G149000--Sobic003G079600 Sobic006G169600 Sobic006G169600 Sobic004G149000--Sobic006G169600 Sobic002G280001--Sobic002G227100 Sobic002G280001--Sobic007G200300 Sobic002G280001--Sobic006G270300 Sobic002G280001--Sobic004G149000 Sobic002G280001--Sobic004G081000 Sobic002G280001--Sobic004G203600 Sobic002G266250 Sobic002G266250 Sobic002G280001--Sobic002G266250 Sobic006G024400 Sobic006G024400 Sobic002G280001--Sobic006G024400 Sobic002G280001--Sobic003G079600 Sobic006G270300--Sobic002G227100 Sobic006G270300--Sobic004G203600 Sobic006G270300--Sobic007G200300 Sobic006G270300--Sobic002G280001 Sobic006G270300--Sobic004G149000 Sobic006G270300--Sobic003G079600 Sobic003G150700 Sobic003G150700 Sobic006G270300--Sobic003G150700 Sobic002G123700 Sobic002G123700 Sobic006G270300--Sobic002G123700 Sobic006G270300--Sobic006G111400 Sobic002G227100--Sobic002G280001 Sobic007G174200 Sobic007G174200 Sobic002G227100--Sobic007G174200 Sobic002G227100--Sobic006G270300 Sobic002G227100--Sobic007G200300 Sobic002G227100--Sobic004G149000 Sobic002G227100--Sobic002G266250 Sobic006G170800 Sobic006G170800 Sobic002G227100--Sobic006G170800 Sobic002G227100--Sobic003G079600 Sobic004G305300 Sobic004G305300 Sobic002G227100--Sobic004G305300 Sobic004G202750 Sobic004G202750 Sobic002G320700--Sobic004G202750 Sobic002G320700--Sobic006G170800 Sobic001G033200 Sobic001G033200 Sobic002G320700--Sobic001G033200 Sobic001G104100 Sobic001G104100 Sobic002G320700--Sobic001G104100 Sobic001G350300 Sobic001G350300 Sobic002G320700--Sobic001G350300 Sobic001G028500 Sobic001G028500 Sobic002G320700--Sobic001G028500 Sobic004G350600 Sobic004G350600 Sobic002G320700--Sobic004G350600 Sobic001G071700 Sobic001G071700 Sobic002G320700--Sobic001G071700 Sobic002G399000 Sobic002G399000 Sobic002G320700--Sobic002G399000 Sobic004G081000--Sobic004G149000 Sobic004G081000--Sobic002G280001 Sobic004G081000--Sobic007G200300 Sobic001G361750 Sobic001G361750 Sobic004G081000--Sobic001G361750 Sobic004G081000--Sobic003G079600 Sobic004G081000--Sobic009G147600 Sobic001G350800 Sobic001G350800 Sobic004G081000--Sobic001G350800 Sobic004G081000--Sobic002G227100 Sobic010G242000 Sobic010G242000 Sobic004G081000--Sobic010G242000 Sobic009G199900--Sobic001G104100 Sobic009G199900--Sobic001G028500 Sobic003G106100 Sobic003G106100 Sobic009G199900--Sobic003G106100 Sobic009G199900--Sobic004G202750 Sobic009G199900--Sobic004G350600 Sobic004G231501 Sobic004G231501 Sobic009G199900--Sobic004G231501 Sobic004G026000 Sobic004G026000 Sobic009G199900--Sobic004G026000 Sobic003G155800 Sobic003G155800 Sobic009G199900--Sobic003G155800 Sobic004G314100 Sobic004G314100 Sobic009G199900--Sobic004G314100 Sobic008G007100 Sobic008G007100 Sobic006G111400--Sobic008G007100 Sobic002G234800 Sobic002G234800 Sobic006G111400--Sobic002G234800 Sobic006G111400--Sobic006G169600 Sobic006G111400--Sobic009G199900 Sobic003G251900 Sobic003G251900 Sobic006G111400--Sobic003G251900 Sobic006G111400--Sobic007G200300 Sobic003G234300 Sobic003G234300 Sobic006G111400--Sobic003G234300 Sobic006G111400--Sobic004G350600 Sobic006G111400--Sobic004G149000 Sobic004G203600--Sobic006G270300 Sobic004G203600--Sobic001G033200 Sobic004G203600--Sobic002G320700 Sobic004G203600--Sobic002G123700 Sobic002G314950 Sobic002G314950 Sobic004G203600--Sobic002G314950 Sobic004G203600--Sobic003G150700 Sobic006G121200 Sobic006G121200 Sobic004G203600--Sobic006G121200 Sobic004G203600--Sobic001G104100 Sobic004G203600--Sobic007G200300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.