Gene annotation
Transcriptome id Sobic.007G174200.1
Synonym
Functional annotation carrier, putative, expressed
UniProt A0A1Z5RAF2
Pfam PF03087
Panther DB PTHR33070 PTHR33070:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17070 : Arabidopsis protein of unknown function (DUF241)
RAP-DB (Rice) LOC_Os08g43960.1 : carrier, putative, expressed
MaizeGDB (Corn) Zm00025a005655
Brachypodium PNT68556
Barley HORVU7Hr1G057970.3 , HORVU7Hr1G057970.2 , HORVU7Hr1G057970.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
2 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
3 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
4 Sobic.002G266250 - -
5 Sobic.004G305300 - -
6 Sobic.002G320700 expressed protein -
7 Sobic.004G350600 AMP-binding domain containing protein, expressed -
8 Sobic.002G118400 - -
9 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
10 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
11 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
12 Sobic.002G280001 - -
13 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
14 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
15 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
16 Sobic.001G061000 plastocyanin-like domain containing protein, putative, expressed -
17 Sobic.004G149000 - -
18 Sobic.004G177500 expressed protein -
19 Sobic.001G524900 ribosomal protein L5, putative, expressed K02931: RP-L5, MRPL5, large subunit ribosomal protein L5
20 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase


Gene co-expression network
sample Sobic007G174200 Sobic007G174200 Sobic002G227100 Sobic002G227100 Sobic007G174200--Sobic002G227100 Sobic001G350300 Sobic001G350300 Sobic007G174200--Sobic001G350300 Sobic006G170800 Sobic006G170800 Sobic007G174200--Sobic006G170800 Sobic002G266250 Sobic002G266250 Sobic007G174200--Sobic002G266250 Sobic004G305300 Sobic004G305300 Sobic007G174200--Sobic004G305300 Sobic002G320700 Sobic002G320700 Sobic007G174200--Sobic002G320700 Sobic004G350600 Sobic004G350600 Sobic007G174200--Sobic004G350600 Sobic002G118400 Sobic002G118400 Sobic007G174200--Sobic002G118400 Sobic001G033200 Sobic001G033200 Sobic007G174200--Sobic001G033200 Sobic002G280001 Sobic002G280001 Sobic002G227100--Sobic002G280001 Sobic002G227100--Sobic007G174200 Sobic006G270300 Sobic006G270300 Sobic002G227100--Sobic006G270300 Sobic007G200300 Sobic007G200300 Sobic002G227100--Sobic007G200300 Sobic004G149000 Sobic004G149000 Sobic002G227100--Sobic004G149000 Sobic002G227100--Sobic002G266250 Sobic002G227100--Sobic006G170800 Sobic003G079600 Sobic003G079600 Sobic002G227100--Sobic003G079600 Sobic002G227100--Sobic004G305300 Sobic001G350300--Sobic006G170800 Sobic001G350300--Sobic004G305300 Sobic002G399000 Sobic002G399000 Sobic001G350300--Sobic002G399000 Sobic001G350300--Sobic004G350600 Sobic001G191300 Sobic001G191300 Sobic001G350300--Sobic001G191300 Sobic001G104100 Sobic001G104100 Sobic001G350300--Sobic001G104100 Sobic001G350300--Sobic002G320700 Sobic003G118500 Sobic003G118500 Sobic001G350300--Sobic003G118500 Sobic001G113400 Sobic001G113400 Sobic001G350300--Sobic001G113400 Sobic006G170800--Sobic001G350300 Sobic006G170800--Sobic002G320700 Sobic006G170800--Sobic004G305300 Sobic006G170800--Sobic002G399000 Sobic010G242000 Sobic010G242000 Sobic006G170800--Sobic010G242000 Sobic006G170800--Sobic004G350600 Sobic004G202750 Sobic004G202750 Sobic006G170800--Sobic004G202750 Sobic006G170800--Sobic001G104100 Sobic005G025400 Sobic005G025400 Sobic006G170800--Sobic005G025400 Sobic002G266250--Sobic007G174200 Sobic002G266250--Sobic002G227100 Sobic009G192933 Sobic009G192933 Sobic002G266250--Sobic009G192933 Sobic002G266250--Sobic002G280001 Sobic001G204400 Sobic001G204400 Sobic002G266250--Sobic001G204400 Sobic002G266250--Sobic004G305300 Sobic004G203600 Sobic004G203600 Sobic002G266250--Sobic004G203600 Sobic002G266250--Sobic003G079600 Sobic002G266250--Sobic001G350300 Sobic004G305300--Sobic001G350300 Sobic004G305300--Sobic006G170800 Sobic004G305300--Sobic003G118500 Sobic004G305300--Sobic001G191300 Sobic004G305300--Sobic001G104100 Sobic002G085600 Sobic002G085600 Sobic004G305300--Sobic002G085600 Sobic004G305300--Sobic004G350600 Sobic004G305300--Sobic002G399000 Sobic007G077466 Sobic007G077466 Sobic004G305300--Sobic007G077466 Sobic002G320700--Sobic004G202750 Sobic002G320700--Sobic006G170800 Sobic002G320700--Sobic001G033200 Sobic002G320700--Sobic001G104100 Sobic002G320700--Sobic001G350300 Sobic001G028500 Sobic001G028500 Sobic002G320700--Sobic001G028500 Sobic002G320700--Sobic004G350600 Sobic001G071700 Sobic001G071700 Sobic002G320700--Sobic001G071700 Sobic002G320700--Sobic002G399000 Sobic004G350600--Sobic001G350300 Sobic004G350600--Sobic002G399000 Sobic004G350600--Sobic001G104100 Sobic004G350600--Sobic001G028500 Sobic004G350600--Sobic006G170800 Sobic009G199900 Sobic009G199900 Sobic004G350600--Sobic009G199900 Sobic004G350600--Sobic004G305300 Sobic004G350600--Sobic002G320700 Sobic004G350600--Sobic003G118500 Sobic001G061000 Sobic001G061000 Sobic002G118400--Sobic001G061000 Sobic004G045200 Sobic004G045200 Sobic002G118400--Sobic004G045200 Sobic002G314950 Sobic002G314950 Sobic002G118400--Sobic002G314950 Sobic002G118400--Sobic001G033200 Sobic007G200200 Sobic007G200200 Sobic002G118400--Sobic007G200200 Sobic006G269300 Sobic006G269300 Sobic002G118400--Sobic006G269300 Sobic002G118400--Sobic002G320700 Sobic001G456650 Sobic001G456650 Sobic002G118400--Sobic001G456650 Sobic002G118400--Sobic004G203600 Sobic001G033200--Sobic002G320700 Sobic001G361750 Sobic001G361750 Sobic001G033200--Sobic001G361750 Sobic001G033200--Sobic001G071700 Sobic004G231501 Sobic004G231501 Sobic001G033200--Sobic004G231501 Sobic001G483200 Sobic001G483200 Sobic001G033200--Sobic001G483200 Sobic001G033200--Sobic001G028500 Sobic007G061500 Sobic007G061500 Sobic001G033200--Sobic007G061500 Sobic001G033200--Sobic001G456650 Sobic001G033200--Sobic004G202750
Octagon: transcription factors


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