Gene annotation
Transcriptome id Sobic.002G118400.1
Synonym
Functional annotation -
UniProt A0A1B6QAR3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G061000 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.004G045200 phytosulfokine receptor precursor, putative, expressed -
3 Sobic.002G314950 - -
4 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
5 Sobic.007G200200 lectin protein kinase family protein, putative, expressed -
6 Sobic.006G269300 - -
7 Sobic.002G320700 expressed protein -
8 Sobic.001G456650 - K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
9 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
10 Sobic.007G174200 carrier, putative, expressed -
11 Sobic.001G435800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-binding EF hand family protein, putative, expressed -
12 Sobic.001G068901 - -
13 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
14 Sobic.004G305300 - -
15 Sobic.001G361750 - -
16 Sobic.003G017300 CTP synthase, putative, expressed K01937: pyrG, CTP synthase
17 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.010G197400 tetratricopeptide-like helical, putative, expressed -
19 Sobic.001G527900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
20 Sobic.005G145700 - -


Gene co-expression network
sample Sobic002G118400 Sobic002G118400 Sobic001G061000 Sobic001G061000 Sobic002G118400--Sobic001G061000 Sobic004G045200 Sobic004G045200 Sobic002G118400--Sobic004G045200 Sobic002G314950 Sobic002G314950 Sobic002G118400--Sobic002G314950 Sobic001G033200 Sobic001G033200 Sobic002G118400--Sobic001G033200 Sobic007G200200 Sobic007G200200 Sobic002G118400--Sobic007G200200 Sobic006G269300 Sobic006G269300 Sobic002G118400--Sobic006G269300 Sobic002G320700 Sobic002G320700 Sobic002G118400--Sobic002G320700 Sobic001G456650 Sobic001G456650 Sobic002G118400--Sobic001G456650 Sobic004G203600 Sobic004G203600 Sobic002G118400--Sobic004G203600 Sobic001G061000--Sobic002G118400 Sobic001G061000--Sobic004G045200 Sobic001G061000--Sobic007G200200 Sobic001G061000--Sobic001G456650 Sobic001G061000--Sobic001G033200 Sobic001G061000--Sobic002G314950 Sobic001G361750 Sobic001G361750 Sobic001G061000--Sobic001G361750 Sobic001G061000--Sobic002G320700 Sobic001G068901 Sobic001G068901 Sobic001G061000--Sobic001G068901 Sobic004G045200--Sobic001G061000 Sobic004G045200--Sobic002G118400 Sobic004G045200--Sobic007G200200 Sobic004G045200--Sobic002G314950 Sobic004G045200--Sobic004G203600 Sobic004G045200--Sobic001G033200 Sobic009G182000 Sobic009G182000 Sobic004G045200--Sobic009G182000 Sobic004G045200--Sobic001G456650 Sobic004G045200--Sobic001G361750 Sobic001G527900 Sobic001G527900 Sobic002G314950--Sobic001G527900 Sobic006G232300 Sobic006G232300 Sobic002G314950--Sobic006G232300 Sobic005G155001 Sobic005G155001 Sobic002G314950--Sobic005G155001 Sobic010G253700 Sobic010G253700 Sobic002G314950--Sobic010G253700 Sobic001G483200 Sobic001G483200 Sobic002G314950--Sobic001G483200 Sobic006G093400 Sobic006G093400 Sobic002G314950--Sobic006G093400 Sobic009G114900 Sobic009G114900 Sobic002G314950--Sobic009G114900 Sobic009G004300 Sobic009G004300 Sobic002G314950--Sobic009G004300 Sobic002G314950--Sobic007G200200 Sobic001G033200--Sobic002G320700 Sobic001G033200--Sobic001G361750 Sobic001G071700 Sobic001G071700 Sobic001G033200--Sobic001G071700 Sobic004G231501 Sobic004G231501 Sobic001G033200--Sobic004G231501 Sobic001G033200--Sobic001G483200 Sobic001G028500 Sobic001G028500 Sobic001G033200--Sobic001G028500 Sobic007G061500 Sobic007G061500 Sobic001G033200--Sobic007G061500 Sobic001G033200--Sobic001G456650 Sobic004G202750 Sobic004G202750 Sobic001G033200--Sobic004G202750 Sobic007G200200--Sobic001G456650 Sobic007G200200--Sobic001G068901 Sobic006G229600 Sobic006G229600 Sobic007G200200--Sobic006G229600 Sobic007G200200--Sobic001G061000 Sobic003G235601 Sobic003G235601 Sobic007G200200--Sobic003G235601 Sobic009G072400 Sobic009G072400 Sobic007G200200--Sobic009G072400 Sobic007G200200--Sobic002G314950 Sobic007G200200--Sobic006G232300 Sobic002G271900 Sobic002G271900 Sobic007G200200--Sobic002G271900 Sobic003G017300 Sobic003G017300 Sobic006G269300--Sobic003G017300 Sobic006G269300--Sobic001G456650 Sobic006G269300--Sobic009G114900 Sobic002G252700 Sobic002G252700 Sobic006G269300--Sobic002G252700 Sobic009G106300 Sobic009G106300 Sobic006G269300--Sobic009G106300 Sobic006G269300--Sobic001G033200 Sobic006G269300--Sobic001G068901 Sobic009G005750 Sobic009G005750 Sobic006G269300--Sobic009G005750 Sobic006G269300--Sobic007G061500 Sobic002G320700--Sobic004G202750 Sobic006G170800 Sobic006G170800 Sobic002G320700--Sobic006G170800 Sobic002G320700--Sobic001G033200 Sobic001G104100 Sobic001G104100 Sobic002G320700--Sobic001G104100 Sobic001G350300 Sobic001G350300 Sobic002G320700--Sobic001G350300 Sobic002G320700--Sobic001G028500 Sobic004G350600 Sobic004G350600 Sobic002G320700--Sobic004G350600 Sobic002G320700--Sobic001G071700 Sobic002G399000 Sobic002G399000 Sobic002G320700--Sobic002G399000 Sobic001G456650--Sobic007G200200 Sobic007G165200 Sobic007G165200 Sobic001G456650--Sobic007G165200 Sobic001G456650--Sobic001G361750 Sobic001G456650--Sobic001G068901 Sobic001G456650--Sobic006G093400 Sobic001G456650--Sobic001G061000 Sobic001G456650--Sobic001G033200 Sobic001G456650--Sobic009G072400 Sobic001G456650--Sobic006G232300 Sobic006G270300 Sobic006G270300 Sobic004G203600--Sobic006G270300 Sobic004G203600--Sobic001G033200 Sobic004G203600--Sobic002G320700 Sobic002G123700 Sobic002G123700 Sobic004G203600--Sobic002G123700 Sobic004G203600--Sobic002G314950 Sobic003G150700 Sobic003G150700 Sobic004G203600--Sobic003G150700 Sobic006G121200 Sobic006G121200 Sobic004G203600--Sobic006G121200 Sobic004G203600--Sobic001G104100 Sobic007G200300 Sobic007G200300 Sobic004G203600--Sobic007G200300
Octagon: transcription factors


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