Gene annotation
Transcriptome id Sobic.010G197400.1,Sobic.010G197400.2
Synonym Sb10g024650
Functional annotation tetratricopeptide-like helical, putative, expressed
UniProt C5Z686
Pfam PF13041
Panther DB PTHR24015 PTHR24015:SF721
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G16470 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os03g27880.1 : tetratricopeptide-like helical, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK17606
Barley HORVU7Hr1G092900.3 , HORVU7Hr1G092900.2 , HORVU7Hr1G092900.1 , HORVU7Hr1G092900.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G242100 cytochrome P450 domain containing protein, expressed -
2 Sobic.001G308450 - -
3 Sobic.001G068901 - -
4 Sobic.002G003900 - -
5 Sobic.006G140900 methyltransferase domain containing protein, putative, expressed K03183: demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase
6 Sobic.010G253700 - -
7 Sobic.002G068500 expressed protein -
8 Sobic.009G225300 - -
9 Sobic.001G537600 expressed protein -
10 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -
11 Sobic.003G235601 - -
12 Sobic.004G225450 - -
13 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
14 Sobic.006G065200 SAM domain family protein, expressed -
15 Sobic.010G106400 - -
16 Sobic.006G269300 - -
17 Sobic.004G199000 expressed protein -
18 Sobic.010G096801 - -
19 Sobic.007G165200 - -
20 Sobic.001G456650 - K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase


Gene co-expression network
sample Sobic010G197400 Sobic010G197400 Sobic010G242100 Sobic010G242100 Sobic010G197400--Sobic010G242100 Sobic001G308450 Sobic001G308450 Sobic010G197400--Sobic001G308450 Sobic001G068901 Sobic001G068901 Sobic010G197400--Sobic001G068901 Sobic002G003900 Sobic002G003900 Sobic010G197400--Sobic002G003900 Sobic006G140900 Sobic006G140900 Sobic010G197400--Sobic006G140900 Sobic010G253700 Sobic010G253700 Sobic010G197400--Sobic010G253700 Sobic002G068500 Sobic002G068500 Sobic010G197400--Sobic002G068500 Sobic009G225300 Sobic009G225300 Sobic010G197400--Sobic009G225300 Sobic001G537600 Sobic001G537600 Sobic010G197400--Sobic001G537600 Sobic010G242100--Sobic001G068901 Sobic010G242100--Sobic010G253700 Sobic004G012100 Sobic004G012100 Sobic010G242100--Sobic004G012100 Sobic010G242100--Sobic001G537600 Sobic010G242100--Sobic010G197400 Sobic010G257300 Sobic010G257300 Sobic010G242100--Sobic010G257300 Sobic009G072400 Sobic009G072400 Sobic010G242100--Sobic009G072400 Sobic010G106400 Sobic010G106400 Sobic010G242100--Sobic010G106400 Sobic010G242100--Sobic009G225300 Sobic001G308450--Sobic002G003900 Sobic001G308450--Sobic001G068901 Sobic001G308450--Sobic009G225300 Sobic001G308450--Sobic001G537600 Sobic001G308450--Sobic010G242100 Sobic006G065200 Sobic006G065200 Sobic001G308450--Sobic006G065200 Sobic001G308450--Sobic010G197400 Sobic001G308450--Sobic002G068500 Sobic010G096801 Sobic010G096801 Sobic001G308450--Sobic010G096801 Sobic001G068901--Sobic001G537600 Sobic001G068901--Sobic010G242100 Sobic006G093400 Sobic006G093400 Sobic001G068901--Sobic006G093400 Sobic001G068901--Sobic009G072400 Sobic001G068901--Sobic010G257300 Sobic001G068901--Sobic010G253700 Sobic001G068901--Sobic004G012100 Sobic001G068901--Sobic010G106400 Sobic001G068901--Sobic001G308450 Sobic004G199000 Sobic004G199000 Sobic002G003900--Sobic004G199000 Sobic002G003900--Sobic001G308450 Sobic001G261553 Sobic001G261553 Sobic002G003900--Sobic001G261553 Sobic009G004000 Sobic009G004000 Sobic002G003900--Sobic009G004000 Sobic002G003900--Sobic010G096801 Sobic004G357066 Sobic004G357066 Sobic002G003900--Sobic004G357066 Sobic004G225450 Sobic004G225450 Sobic002G003900--Sobic004G225450 Sobic001G220200 Sobic001G220200 Sobic002G003900--Sobic001G220200 Sobic001G197500 Sobic001G197500 Sobic002G003900--Sobic001G197500 Sobic006G140900--Sobic010G242100 Sobic006G140900--Sobic010G197400 Sobic006G140900--Sobic004G012100 Sobic009G200100 Sobic009G200100 Sobic006G140900--Sobic009G200100 Sobic006G140900--Sobic010G253700 Sobic001G191400 Sobic001G191400 Sobic006G140900--Sobic001G191400 Sobic006G140900--Sobic009G072400 Sobic010G254801 Sobic010G254801 Sobic006G140900--Sobic010G254801 Sobic006G140900--Sobic001G068901 Sobic010G253700--Sobic004G012100 Sobic010G253700--Sobic010G242100 Sobic010G253700--Sobic001G068901 Sobic010G253700--Sobic010G257300 Sobic010G253700--Sobic001G537600 Sobic010G253700--Sobic006G093400 Sobic008G096900 Sobic008G096900 Sobic010G253700--Sobic008G096900 Sobic010G253700--Sobic010G106400 Sobic009G114900 Sobic009G114900 Sobic010G253700--Sobic009G114900 Sobic002G068500--Sobic009G225300 Sobic002G068500--Sobic004G225450 Sobic002G068500--Sobic001G537600 Sobic002G068500--Sobic001G308450 Sobic002G068500--Sobic010G242100 Sobic001G410800 Sobic001G410800 Sobic002G068500--Sobic001G410800 Sobic006G146400 Sobic006G146400 Sobic002G068500--Sobic006G146400 Sobic002G068500--Sobic010G106400 Sobic002G068500--Sobic006G065200 Sobic009G225300--Sobic001G220200 Sobic007G224600 Sobic007G224600 Sobic009G225300--Sobic007G224600 Sobic010G158766 Sobic010G158766 Sobic009G225300--Sobic010G158766 Sobic001G115900 Sobic001G115900 Sobic009G225300--Sobic001G115900 Sobic009G198400 Sobic009G198400 Sobic009G225300--Sobic009G198400 Sobic003G126400 Sobic003G126400 Sobic009G225300--Sobic003G126400 Sobic003G065001 Sobic003G065001 Sobic009G225300--Sobic003G065001 Sobic009G225300--Sobic004G225450 Sobic004G357033 Sobic004G357033 Sobic009G225300--Sobic004G357033 Sobic001G537600--Sobic010G106400 Sobic001G537600--Sobic001G068901 Sobic001G537600--Sobic006G146400 Sobic009G238200 Sobic009G238200 Sobic001G537600--Sobic009G238200 Sobic006G280900 Sobic006G280900 Sobic001G537600--Sobic006G280900 Sobic001G537600--Sobic006G065200 Sobic001G537600--Sobic010G257300 Sobic001G537600--Sobic004G012100 Sobic006G103601 Sobic006G103601 Sobic001G537600--Sobic006G103601
Octagon: transcription factors


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