Gene annotation
Transcriptome id Sobic.002G266250.1
Synonym -
Functional annotation -
UniProt A0A1W0W605
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G174200 carrier, putative, expressed -
2 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
3 Sobic.009G192933 - -
4 Sobic.002G280001 - -
5 Sobic.001G204400 MYB family transcription factor, putative, expressed -
6 Sobic.004G305300 - -
7 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
8 Sobic.003G079600 expressed protein -
9 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
11 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
12 Sobic.008G005800 PMR5, putative, expressed -
13 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
14 Sobic.010G110050 - -
15 Sobic.002G320700 expressed protein -
16 Sobic.002G118400 - -
17 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
18 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
19 Sobic.002G085600 - -
20 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -


Gene co-expression network
sample Sobic002G266250 Sobic002G266250 Sobic007G174200 Sobic007G174200 Sobic002G266250--Sobic007G174200 Sobic002G227100 Sobic002G227100 Sobic002G266250--Sobic002G227100 Sobic009G192933 Sobic009G192933 Sobic002G266250--Sobic009G192933 Sobic002G280001 Sobic002G280001 Sobic002G266250--Sobic002G280001 Sobic001G204400 Sobic001G204400 Sobic002G266250--Sobic001G204400 Sobic004G305300 Sobic004G305300 Sobic002G266250--Sobic004G305300 Sobic004G203600 Sobic004G203600 Sobic002G266250--Sobic004G203600 Sobic003G079600 Sobic003G079600 Sobic002G266250--Sobic003G079600 Sobic001G350300 Sobic001G350300 Sobic002G266250--Sobic001G350300 Sobic007G174200--Sobic002G227100 Sobic007G174200--Sobic001G350300 Sobic006G170800 Sobic006G170800 Sobic007G174200--Sobic006G170800 Sobic007G174200--Sobic002G266250 Sobic007G174200--Sobic004G305300 Sobic002G320700 Sobic002G320700 Sobic007G174200--Sobic002G320700 Sobic004G350600 Sobic004G350600 Sobic007G174200--Sobic004G350600 Sobic002G118400 Sobic002G118400 Sobic007G174200--Sobic002G118400 Sobic001G033200 Sobic001G033200 Sobic007G174200--Sobic001G033200 Sobic002G227100--Sobic002G280001 Sobic002G227100--Sobic007G174200 Sobic006G270300 Sobic006G270300 Sobic002G227100--Sobic006G270300 Sobic007G200300 Sobic007G200300 Sobic002G227100--Sobic007G200300 Sobic004G149000 Sobic004G149000 Sobic002G227100--Sobic004G149000 Sobic002G227100--Sobic002G266250 Sobic002G227100--Sobic006G170800 Sobic002G227100--Sobic003G079600 Sobic002G227100--Sobic004G305300 Sobic002G085600 Sobic002G085600 Sobic009G192933--Sobic002G085600 Sobic001G113400 Sobic001G113400 Sobic009G192933--Sobic001G113400 Sobic004G144300 Sobic004G144300 Sobic009G192933--Sobic004G144300 Sobic001G019601 Sobic001G019601 Sobic009G192933--Sobic001G019601 Sobic002G001500 Sobic002G001500 Sobic009G192933--Sobic002G001500 Sobic003G362800 Sobic003G362800 Sobic009G192933--Sobic003G362800 Sobic003G001650 Sobic003G001650 Sobic009G192933--Sobic003G001650 Sobic009G192933--Sobic004G305300 Sobic002G274000 Sobic002G274000 Sobic009G192933--Sobic002G274000 Sobic002G280001--Sobic002G227100 Sobic002G280001--Sobic007G200300 Sobic002G280001--Sobic006G270300 Sobic002G280001--Sobic004G149000 Sobic004G081000 Sobic004G081000 Sobic002G280001--Sobic004G081000 Sobic002G280001--Sobic004G203600 Sobic002G280001--Sobic002G266250 Sobic006G024400 Sobic006G024400 Sobic002G280001--Sobic006G024400 Sobic002G280001--Sobic003G079600 Sobic003G336300 Sobic003G336300 Sobic001G204400--Sobic003G336300 Sobic001G204400--Sobic009G192933 Sobic002G375600 Sobic002G375600 Sobic001G204400--Sobic002G375600 Sobic001G204400--Sobic002G266250 Sobic001G460150 Sobic001G460150 Sobic001G204400--Sobic001G460150 Sobic009G049100 Sobic009G049100 Sobic001G204400--Sobic009G049100 Sobic004G258450 Sobic004G258450 Sobic001G204400--Sobic004G258450 Sobic008G024700 Sobic008G024700 Sobic001G204400--Sobic008G024700 Sobic007G031000 Sobic007G031000 Sobic001G204400--Sobic007G031000 Sobic004G305300--Sobic001G350300 Sobic004G305300--Sobic006G170800 Sobic003G118500 Sobic003G118500 Sobic004G305300--Sobic003G118500 Sobic001G191300 Sobic001G191300 Sobic004G305300--Sobic001G191300 Sobic001G104100 Sobic001G104100 Sobic004G305300--Sobic001G104100 Sobic004G305300--Sobic002G085600 Sobic004G305300--Sobic004G350600 Sobic002G399000 Sobic002G399000 Sobic004G305300--Sobic002G399000 Sobic007G077466 Sobic007G077466 Sobic004G305300--Sobic007G077466 Sobic004G203600--Sobic006G270300 Sobic004G203600--Sobic001G033200 Sobic004G203600--Sobic002G320700 Sobic002G123700 Sobic002G123700 Sobic004G203600--Sobic002G123700 Sobic002G314950 Sobic002G314950 Sobic004G203600--Sobic002G314950 Sobic003G150700 Sobic003G150700 Sobic004G203600--Sobic003G150700 Sobic006G121200 Sobic006G121200 Sobic004G203600--Sobic006G121200 Sobic004G203600--Sobic001G104100 Sobic004G203600--Sobic007G200300 Sobic003G079600--Sobic003G150700 Sobic009G208000 Sobic009G208000 Sobic003G079600--Sobic009G208000 Sobic003G079600--Sobic004G149000 Sobic003G079600--Sobic002G227100 Sobic003G040300 Sobic003G040300 Sobic003G079600--Sobic003G040300 Sobic003G079600--Sobic006G270300 Sobic007G010400 Sobic007G010400 Sobic003G079600--Sobic007G010400 Sobic004G181000 Sobic004G181000 Sobic003G079600--Sobic004G181000 Sobic003G079600--Sobic002G001500 Sobic001G350300--Sobic006G170800 Sobic001G350300--Sobic004G305300 Sobic001G350300--Sobic002G399000 Sobic001G350300--Sobic004G350600 Sobic001G350300--Sobic001G191300 Sobic001G350300--Sobic001G104100 Sobic001G350300--Sobic002G320700 Sobic001G350300--Sobic003G118500 Sobic001G350300--Sobic001G113400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.