Gene annotation
Transcriptome id Sobic.009G192933.1
Synonym -
Functional annotation -
UniProt A0A1Z5R3B8
Pfam PF02519
Panther DB PTHR31175 PTHR31175:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT5G27780 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g37400.1 : OsSAUR45 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a014494
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G085600 - -
2 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
3 Sobic.004G144300 - -
4 Sobic.001G019601 - -
5 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
6 Sobic.003G362800 - -
7 Sobic.003G001650 - -
8 Sobic.004G305300 - -
9 Sobic.002G274000 OsSub59 - Putative Subtilisin homologue, expressed -
10 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
11 Sobic.007G077466 - -
12 Sobic.001G191300 bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
13 Sobic.002G266250 - -
14 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
15 Sobic.003G118500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
16 Sobic.001G204400 MYB family transcription factor, putative, expressed -
17 Sobic.003G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha-amylase isozime 2 precursor AMY3 (Os)(PubMedID : 27208977)@alpha-amylase precursor, putative, expressed -
18 Sobic.004G218400 - -
19 Sobic.010G000200 expressed protein -
20 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic009G192933 Sobic009G192933 Sobic002G085600 Sobic002G085600 Sobic009G192933--Sobic002G085600 Sobic001G113400 Sobic001G113400 Sobic009G192933--Sobic001G113400 Sobic004G144300 Sobic004G144300 Sobic009G192933--Sobic004G144300 Sobic001G019601 Sobic001G019601 Sobic009G192933--Sobic001G019601 Sobic002G001500 Sobic002G001500 Sobic009G192933--Sobic002G001500 Sobic003G362800 Sobic003G362800 Sobic009G192933--Sobic003G362800 Sobic003G001650 Sobic003G001650 Sobic009G192933--Sobic003G001650 Sobic004G305300 Sobic004G305300 Sobic009G192933--Sobic004G305300 Sobic002G274000 Sobic002G274000 Sobic009G192933--Sobic002G274000 Sobic002G085600--Sobic001G113400 Sobic002G085600--Sobic002G001500 Sobic002G085600--Sobic009G192933 Sobic002G085600--Sobic003G362800 Sobic001G191300 Sobic001G191300 Sobic002G085600--Sobic001G191300 Sobic002G085600--Sobic004G305300 Sobic009G223900 Sobic009G223900 Sobic002G085600--Sobic009G223900 Sobic002G085600--Sobic004G144300 Sobic002G398600 Sobic002G398600 Sobic002G085600--Sobic002G398600 Sobic001G113400--Sobic003G362800 Sobic001G113400--Sobic002G001500 Sobic001G113400--Sobic002G085600 Sobic009G208000 Sobic009G208000 Sobic001G113400--Sobic009G208000 Sobic001G113400--Sobic004G144300 Sobic003G155800 Sobic003G155800 Sobic001G113400--Sobic003G155800 Sobic001G113400--Sobic009G223900 Sobic004G181000 Sobic004G181000 Sobic001G113400--Sobic004G181000 Sobic001G113400--Sobic009G192933 Sobic004G310400 Sobic004G310400 Sobic004G144300--Sobic004G310400 Sobic004G144300--Sobic003G362800 Sobic004G144300--Sobic001G113400 Sobic005G048800 Sobic005G048800 Sobic004G144300--Sobic005G048800 Sobic001G520000 Sobic001G520000 Sobic004G144300--Sobic001G520000 Sobic004G144300--Sobic002G085600 Sobic003G118500 Sobic003G118500 Sobic004G144300--Sobic003G118500 Sobic009G049100 Sobic009G049100 Sobic004G144300--Sobic009G049100 Sobic001G096200 Sobic001G096200 Sobic004G144300--Sobic001G096200 Sobic001G019601--Sobic009G192933 Sobic001G019601--Sobic002G085600 Sobic001G541232 Sobic001G541232 Sobic001G019601--Sobic001G541232 Sobic001G019601--Sobic001G113400 Sobic006G152100 Sobic006G152100 Sobic001G019601--Sobic006G152100 Sobic008G067700 Sobic008G067700 Sobic001G019601--Sobic008G067700 Sobic009G080000 Sobic009G080000 Sobic001G019601--Sobic009G080000 Sobic001G019601--Sobic004G144300 Sobic001G019601--Sobic002G001500 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic002G001500--Sobic009G223900 Sobic002G001500--Sobic009G208000 Sobic008G103400 Sobic008G103400 Sobic002G001500--Sobic008G103400 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic004G173200 Sobic004G173200 Sobic002G001500--Sobic004G173200 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic010G000200 Sobic010G000200 Sobic003G362800--Sobic010G000200 Sobic003G362800--Sobic004G173200 Sobic003G362800--Sobic003G001650 Sobic003G001650--Sobic003G362800 Sobic004G218400 Sobic004G218400 Sobic003G001650--Sobic004G218400 Sobic008G170800 Sobic008G170800 Sobic003G001650--Sobic008G170800 Sobic010G042300 Sobic010G042300 Sobic003G001650--Sobic010G042300 Sobic001G454600 Sobic001G454600 Sobic003G001650--Sobic001G454600 Sobic003G001650--Sobic002G001500 Sobic008G192900 Sobic008G192900 Sobic003G001650--Sobic008G192900 Sobic003G001650--Sobic008G103400 Sobic003G001650--Sobic004G144300 Sobic001G350300 Sobic001G350300 Sobic004G305300--Sobic001G350300 Sobic006G170800 Sobic006G170800 Sobic004G305300--Sobic006G170800 Sobic004G305300--Sobic003G118500 Sobic004G305300--Sobic001G191300 Sobic001G104100 Sobic001G104100 Sobic004G305300--Sobic001G104100 Sobic004G305300--Sobic002G085600 Sobic004G350600 Sobic004G350600 Sobic004G305300--Sobic004G350600 Sobic002G399000 Sobic002G399000 Sobic004G305300--Sobic002G399000 Sobic007G077466 Sobic007G077466 Sobic004G305300--Sobic007G077466 Sobic002G274000--Sobic004G218400 Sobic001G334400 Sobic001G334400 Sobic002G274000--Sobic001G334400 Sobic006G268100 Sobic006G268100 Sobic002G274000--Sobic006G268100 Sobic003G067600 Sobic003G067600 Sobic002G274000--Sobic003G067600 Sobic002G274000--Sobic003G001650 Sobic002G274000--Sobic004G173200 Sobic005G110553 Sobic005G110553 Sobic002G274000--Sobic005G110553 Sobic002G309300 Sobic002G309300 Sobic002G274000--Sobic002G309300 Sobic001G370800 Sobic001G370800 Sobic002G274000--Sobic001G370800
Octagon: transcription factors


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