Gene annotation
Transcriptome id Sobic.001G524900.2,Sobic.001G524900.1
Synonym Sb01g048870
Functional annotation ribosomal protein L5, putative, expressed
UniProt A0A1B6QQW5 , A0A1B6QQU9
Pfam PF00281 PF00281 PF00673
Panther DB PTHR11994 PTHR11994:SF4 PTHR11994
NCBI CDD KOG0398; Mitochondrial/chloroplast ribosomal protein L5/L7
KEGG Orthology K02931; RP-L5, MRPL5, large subunit ribosomal protein L5
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01310 : Ribosomal L5P family protein
RAP-DB (Rice) LOC_Os03g03360.1 : ribosomal protein L5, putative, expressed
MaizeGDB (Corn) Zm00025a000332
Brachypodium KQK23904
Barley HORVU4Hr1G084410.1 , HORVU4Hr1G084410.3 , HORVU4Hr1G084410.4
Wheat TraesCS5A02G513500 , TraesCS4B02G344600 , TraesCS4B02G344600 , TraesCS4D02G339700
Populus -


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cDNA sequences
Sobic.001G524900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G119100 - -
2 Sobic.002G076450 - -
3 Sobic.010G051900 expressed protein -
4 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
5 Sobic.007G174200 carrier, putative, expressed -
6 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
7 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
8 Sobic.009G047033 - -
9 Sobic.006G152801 - -
10 Sobic.004G007200 - -
11 Sobic.002G280001 - -
12 Sobic.003G331200 - -
13 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
14 Sobic.008G065700 RNA recognition motif containing protein, expressed -
15 Sobic.005G201100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
16 Sobic.003G092150 - -
17 Sobic.008G134500 protein kinase domain containing protein, expressed -
18 Sobic.005G040950 - -
19 Sobic.006G128450 - -
20 Sobic.002G180200 - -


Gene co-expression network
sample Sobic001G524900 Sobic001G524900 Sobic008G119100 Sobic008G119100 Sobic001G524900--Sobic008G119100 Sobic002G076450 Sobic002G076450 Sobic001G524900--Sobic002G076450 Sobic010G051900 Sobic010G051900 Sobic001G524900--Sobic010G051900 Sobic002G227100 Sobic002G227100 Sobic001G524900--Sobic002G227100 Sobic007G174200 Sobic007G174200 Sobic001G524900--Sobic007G174200 Sobic001G367900 Sobic001G367900 Sobic001G524900--Sobic001G367900 Sobic010G242000 Sobic010G242000 Sobic001G524900--Sobic010G242000 Sobic009G047033 Sobic009G047033 Sobic001G524900--Sobic009G047033 Sobic006G152801 Sobic006G152801 Sobic001G524900--Sobic006G152801 Sobic008G119100--Sobic002G076450 Sobic008G119100--Sobic010G051900 Sobic008G119100--Sobic001G524900 Sobic008G119100--Sobic001G367900 Sobic003G331200 Sobic003G331200 Sobic008G119100--Sobic003G331200 Sobic003G092150 Sobic003G092150 Sobic008G119100--Sobic003G092150 Sobic005G040950 Sobic005G040950 Sobic008G119100--Sobic005G040950 Sobic008G119100--Sobic009G047033 Sobic007G226000 Sobic007G226000 Sobic008G119100--Sobic007G226000 Sobic002G076450--Sobic008G119100 Sobic002G076450--Sobic010G051900 Sobic002G076450--Sobic009G047033 Sobic005G201100 Sobic005G201100 Sobic002G076450--Sobic005G201100 Sobic002G076450--Sobic001G524900 Sobic002G076450--Sobic005G040950 Sobic006G128450 Sobic006G128450 Sobic002G076450--Sobic006G128450 Sobic002G076450--Sobic003G092150 Sobic003G289300 Sobic003G289300 Sobic002G076450--Sobic003G289300 Sobic010G051900--Sobic005G040950 Sobic010G051900--Sobic008G119100 Sobic010G051900--Sobic002G076450 Sobic010G051900--Sobic009G047033 Sobic010G051600 Sobic010G051600 Sobic010G051900--Sobic010G051600 Sobic010G051900--Sobic003G289300 Sobic001G241500 Sobic001G241500 Sobic010G051900--Sobic001G241500 Sobic003G157800 Sobic003G157800 Sobic010G051900--Sobic003G157800 Sobic010G051900--Sobic001G524900 Sobic002G280001 Sobic002G280001 Sobic002G227100--Sobic002G280001 Sobic002G227100--Sobic007G174200 Sobic006G270300 Sobic006G270300 Sobic002G227100--Sobic006G270300 Sobic007G200300 Sobic007G200300 Sobic002G227100--Sobic007G200300 Sobic004G149000 Sobic004G149000 Sobic002G227100--Sobic004G149000 Sobic002G266250 Sobic002G266250 Sobic002G227100--Sobic002G266250 Sobic006G170800 Sobic006G170800 Sobic002G227100--Sobic006G170800 Sobic003G079600 Sobic003G079600 Sobic002G227100--Sobic003G079600 Sobic004G305300 Sobic004G305300 Sobic002G227100--Sobic004G305300 Sobic007G174200--Sobic002G227100 Sobic001G350300 Sobic001G350300 Sobic007G174200--Sobic001G350300 Sobic007G174200--Sobic006G170800 Sobic007G174200--Sobic002G266250 Sobic007G174200--Sobic004G305300 Sobic002G320700 Sobic002G320700 Sobic007G174200--Sobic002G320700 Sobic004G350600 Sobic004G350600 Sobic007G174200--Sobic004G350600 Sobic002G118400 Sobic002G118400 Sobic007G174200--Sobic002G118400 Sobic001G033200 Sobic001G033200 Sobic007G174200--Sobic001G033200 Sobic007G010400 Sobic007G010400 Sobic001G367900--Sobic007G010400 Sobic003G149400 Sobic003G149400 Sobic001G367900--Sobic003G149400 Sobic008G065700 Sobic008G065700 Sobic001G367900--Sobic008G065700 Sobic007G210200 Sobic007G210200 Sobic001G367900--Sobic007G210200 Sobic001G367900--Sobic003G331200 Sobic004G000500 Sobic004G000500 Sobic001G367900--Sobic004G000500 Sobic001G367900--Sobic007G226000 Sobic001G367900--Sobic003G092150 Sobic009G122000 Sobic009G122000 Sobic001G367900--Sobic009G122000 Sobic005G025400 Sobic005G025400 Sobic010G242000--Sobic005G025400 Sobic010G242000--Sobic006G170800 Sobic008G159800 Sobic008G159800 Sobic010G242000--Sobic008G159800 Sobic007G114650 Sobic007G114650 Sobic010G242000--Sobic007G114650 Sobic002G399000 Sobic002G399000 Sobic010G242000--Sobic002G399000 Sobic003G440500 Sobic003G440500 Sobic010G242000--Sobic003G440500 Sobic010G242000--Sobic001G350300 Sobic008G134500 Sobic008G134500 Sobic010G242000--Sobic008G134500 Sobic010G242000--Sobic002G320700 Sobic009G047033--Sobic010G051600 Sobic009G047033--Sobic010G051900 Sobic003G091900 Sobic003G091900 Sobic009G047033--Sobic003G091900 Sobic007G185000 Sobic007G185000 Sobic009G047033--Sobic007G185000 Sobic009G047033--Sobic002G076450 Sobic004G343733 Sobic004G343733 Sobic009G047033--Sobic004G343733 Sobic003G308900 Sobic003G308900 Sobic009G047033--Sobic003G308900 Sobic010G213100 Sobic010G213100 Sobic009G047033--Sobic010G213100 Sobic009G047033--Sobic003G092150 Sobic006G152801--Sobic001G524900 Sobic006G152801--Sobic008G119100 Sobic006G152801--Sobic002G227100 Sobic006G152801--Sobic002G076450 Sobic006G152801--Sobic007G174200 Sobic006G152801--Sobic010G242000 Sobic006G152801--Sobic010G051900 Sobic006G152801--Sobic003G092150 Sobic006G152801--Sobic007G226000
Octagon: transcription factors


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