Gene annotation
Transcriptome id Sobic.008G119100.1,Sobic.008G119100.4,Sobic.008G119100.2,Sobic.008G119100.3
Synonym
Functional annotation -
UniProt A0A1B6PD48 , A0A1B6PD63 , A0A1B6PDC0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.008G119100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G076450 - -
2 Sobic.010G051900 expressed protein -
3 Sobic.001G524900 ribosomal protein L5, putative, expressed K02931: RP-L5, MRPL5, large subunit ribosomal protein L5
4 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
5 Sobic.003G331200 - -
6 Sobic.003G092150 - -
7 Sobic.005G040950 - -
8 Sobic.009G047033 - -
9 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
10 Sobic.005G201100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinesin motor domain containing protein, putative, expressed K10406: kinesin family member C2/C3
11 Sobic.003G289300 3-5 exonuclease domain-containing protein, putative, expressed -
12 Sobic.001G423633 - -
13 Sobic.001G241500 MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
14 Sobic.008G065700 RNA recognition motif containing protein, expressed -
15 Sobic.006G049000 - -
16 Sobic.009G037600 RNA methyltransferase, TrmH family protein, putative, expressed -
17 Sobic.009G193600 Eukaryotic aspartyl protease domain containing protein, expressed -
18 Sobic.006G152801 - -
19 Sobic.002G015950 - -
20 Sobic.003G157800 - -


Gene co-expression network
sample Sobic008G119100 Sobic008G119100 Sobic002G076450 Sobic002G076450 Sobic008G119100--Sobic002G076450 Sobic010G051900 Sobic010G051900 Sobic008G119100--Sobic010G051900 Sobic001G524900 Sobic001G524900 Sobic008G119100--Sobic001G524900 Sobic001G367900 Sobic001G367900 Sobic008G119100--Sobic001G367900 Sobic003G331200 Sobic003G331200 Sobic008G119100--Sobic003G331200 Sobic003G092150 Sobic003G092150 Sobic008G119100--Sobic003G092150 Sobic005G040950 Sobic005G040950 Sobic008G119100--Sobic005G040950 Sobic009G047033 Sobic009G047033 Sobic008G119100--Sobic009G047033 Sobic007G226000 Sobic007G226000 Sobic008G119100--Sobic007G226000 Sobic002G076450--Sobic008G119100 Sobic002G076450--Sobic010G051900 Sobic002G076450--Sobic009G047033 Sobic005G201100 Sobic005G201100 Sobic002G076450--Sobic005G201100 Sobic002G076450--Sobic001G524900 Sobic002G076450--Sobic005G040950 Sobic006G128450 Sobic006G128450 Sobic002G076450--Sobic006G128450 Sobic002G076450--Sobic003G092150 Sobic003G289300 Sobic003G289300 Sobic002G076450--Sobic003G289300 Sobic010G051900--Sobic005G040950 Sobic010G051900--Sobic008G119100 Sobic010G051900--Sobic002G076450 Sobic010G051900--Sobic009G047033 Sobic010G051600 Sobic010G051600 Sobic010G051900--Sobic010G051600 Sobic010G051900--Sobic003G289300 Sobic001G241500 Sobic001G241500 Sobic010G051900--Sobic001G241500 Sobic003G157800 Sobic003G157800 Sobic010G051900--Sobic003G157800 Sobic010G051900--Sobic001G524900 Sobic001G524900--Sobic008G119100 Sobic001G524900--Sobic002G076450 Sobic001G524900--Sobic010G051900 Sobic002G227100 Sobic002G227100 Sobic001G524900--Sobic002G227100 Sobic007G174200 Sobic007G174200 Sobic001G524900--Sobic007G174200 Sobic001G524900--Sobic001G367900 Sobic010G242000 Sobic010G242000 Sobic001G524900--Sobic010G242000 Sobic001G524900--Sobic009G047033 Sobic006G152801 Sobic006G152801 Sobic001G524900--Sobic006G152801 Sobic007G010400 Sobic007G010400 Sobic001G367900--Sobic007G010400 Sobic003G149400 Sobic003G149400 Sobic001G367900--Sobic003G149400 Sobic008G065700 Sobic008G065700 Sobic001G367900--Sobic008G065700 Sobic007G210200 Sobic007G210200 Sobic001G367900--Sobic007G210200 Sobic001G367900--Sobic003G331200 Sobic004G000500 Sobic004G000500 Sobic001G367900--Sobic004G000500 Sobic001G367900--Sobic007G226000 Sobic001G367900--Sobic003G092150 Sobic009G122000 Sobic009G122000 Sobic001G367900--Sobic009G122000 Sobic003G331200--Sobic004G000500 Sobic003G331200--Sobic001G367900 Sobic003G331200--Sobic008G119100 Sobic003G331200--Sobic007G210200 Sobic003G331200--Sobic003G092150 Sobic009G193600 Sobic009G193600 Sobic003G331200--Sobic009G193600 Sobic002G347750 Sobic002G347750 Sobic003G331200--Sobic002G347750 Sobic003G331200--Sobic008G065700 Sobic003G331200--Sobic007G226000 Sobic003G092150--Sobic008G065700 Sobic003G092150--Sobic007G210200 Sobic003G092150--Sobic001G367900 Sobic003G092150--Sobic003G149400 Sobic003G092150--Sobic008G119100 Sobic003G092150--Sobic009G047033 Sobic003G092150--Sobic007G226000 Sobic003G092150--Sobic002G076450 Sobic005G110553 Sobic005G110553 Sobic003G092150--Sobic005G110553 Sobic005G040950--Sobic003G289300 Sobic003G339400 Sobic003G339400 Sobic005G040950--Sobic003G339400 Sobic005G040950--Sobic010G051900 Sobic001G437600 Sobic001G437600 Sobic005G040950--Sobic001G437600 Sobic005G040950--Sobic001G241500 Sobic007G119400 Sobic007G119400 Sobic005G040950--Sobic007G119400 Sobic002G076200 Sobic002G076200 Sobic005G040950--Sobic002G076200 Sobic005G219800 Sobic005G219800 Sobic005G040950--Sobic005G219800 Sobic001G494350 Sobic001G494350 Sobic005G040950--Sobic001G494350 Sobic009G047033--Sobic010G051600 Sobic009G047033--Sobic010G051900 Sobic003G091900 Sobic003G091900 Sobic009G047033--Sobic003G091900 Sobic007G185000 Sobic007G185000 Sobic009G047033--Sobic007G185000 Sobic009G047033--Sobic002G076450 Sobic004G343733 Sobic004G343733 Sobic009G047033--Sobic004G343733 Sobic003G308900 Sobic003G308900 Sobic009G047033--Sobic003G308900 Sobic010G213100 Sobic010G213100 Sobic009G047033--Sobic010G213100 Sobic009G047033--Sobic003G092150 Sobic007G226000--Sobic008G065700 Sobic007G226000--Sobic007G185000 Sobic010G249600 Sobic010G249600 Sobic007G226000--Sobic010G249600 Sobic004G224000 Sobic004G224000 Sobic007G226000--Sobic004G224000 Sobic007G226000--Sobic003G149400 Sobic007G226000--Sobic001G367900 Sobic009G240300 Sobic009G240300 Sobic007G226000--Sobic009G240300 Sobic003G440500 Sobic003G440500 Sobic007G226000--Sobic003G440500 Sobic007G226000--Sobic003G092150
Octagon: transcription factors


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