Gene annotation
Transcriptome id Sobic.006G049000.1
Synonym
Functional annotation -
UniProt A0A1B6PK77
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G273950 - -
2 Sobic.002G215600 BRCA1 C Terminus domain containing protein, expressed -
3 Sobic.002G015950 - -
4 Sobic.001G071500 - -
5 Sobic.008G030801 - -
6 Sobic.001G442750 - -
7 Sobic.006G161200 cysteine-rich repeat secretory protein precursor, putative, expressed -
8 Sobic.004G167500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.009G193600 Eukaryotic aspartyl protease domain containing protein, expressed -
10 Sobic.003G059500 verticillium wilt disease resistance protein, putative, expressed -
11 Sobic.003G438100 expressed protein -
12 Sobic.002G054800 "O2(Ortholog in maize:Hartings et al., 1989)"(PubMedID : 31659852)@bZIP transcription factor domain containing protein, expressed -
13 Sobic.008G164850 - -
14 Sobic.002G240200 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
15 Sobic.005G073300 limonoid UDP-glucosyltransferase, putative, expressed -
16 Sobic.010G215201 - -
17 Sobic.005G205100 expressed protein -
18 Sobic.003G149700 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
19 Sobic.002G132201 - -
20 Sobic.001G468900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@DUF623 domain containing protein, expressed -


Gene co-expression network
sample Sobic006G049000 Sobic006G049000 Sobic001G273950 Sobic001G273950 Sobic006G049000--Sobic001G273950 Sobic002G215600 Sobic002G215600 Sobic006G049000--Sobic002G215600 Sobic002G015950 Sobic002G015950 Sobic006G049000--Sobic002G015950 Sobic001G071500 Sobic001G071500 Sobic006G049000--Sobic001G071500 Sobic008G030801 Sobic008G030801 Sobic006G049000--Sobic008G030801 Sobic001G442750 Sobic001G442750 Sobic006G049000--Sobic001G442750 Sobic006G161200 Sobic006G161200 Sobic006G049000--Sobic006G161200 Sobic004G167500 Sobic004G167500 Sobic006G049000--Sobic004G167500 Sobic009G193600 Sobic009G193600 Sobic006G049000--Sobic009G193600 Sobic001G273950--Sobic006G161200 Sobic001G273950--Sobic008G030801 Sobic006G141200 Sobic006G141200 Sobic001G273950--Sobic006G141200 Sobic001G273950--Sobic001G071500 Sobic001G273950--Sobic006G049000 Sobic003G229900 Sobic003G229900 Sobic001G273950--Sobic003G229900 Sobic006G049633 Sobic006G049633 Sobic001G273950--Sobic006G049633 Sobic010G215201 Sobic010G215201 Sobic001G273950--Sobic010G215201 Sobic002G054800 Sobic002G054800 Sobic001G273950--Sobic002G054800 Sobic002G215600--Sobic006G049000 Sobic008G153300 Sobic008G153300 Sobic002G215600--Sobic008G153300 Sobic003G059500 Sobic003G059500 Sobic002G215600--Sobic003G059500 Sobic002G215600--Sobic004G167500 Sobic004G045000 Sobic004G045000 Sobic002G215600--Sobic004G045000 Sobic003G356500 Sobic003G356500 Sobic002G215600--Sobic003G356500 Sobic003G438100 Sobic003G438100 Sobic002G215600--Sobic003G438100 Sobic001G468900 Sobic001G468900 Sobic002G215600--Sobic001G468900 Sobic001G367900 Sobic001G367900 Sobic002G215600--Sobic001G367900 Sobic003G260050 Sobic003G260050 Sobic002G015950--Sobic003G260050 Sobic003G111700 Sobic003G111700 Sobic002G015950--Sobic003G111700 Sobic002G015950--Sobic009G193600 Sobic001G310000 Sobic001G310000 Sobic002G015950--Sobic001G310000 Sobic010G194801 Sobic010G194801 Sobic002G015950--Sobic010G194801 Sobic010G011500 Sobic010G011500 Sobic002G015950--Sobic010G011500 Sobic004G071850 Sobic004G071850 Sobic002G015950--Sobic004G071850 Sobic002G266700 Sobic002G266700 Sobic002G015950--Sobic002G266700 Sobic009G043900 Sobic009G043900 Sobic002G015950--Sobic009G043900 Sobic001G071500--Sobic002G054800 Sobic005G073300 Sobic005G073300 Sobic001G071500--Sobic005G073300 Sobic002G240200 Sobic002G240200 Sobic001G071500--Sobic002G240200 Sobic001G071500--Sobic010G215201 Sobic002G132201 Sobic002G132201 Sobic001G071500--Sobic002G132201 Sobic001G071500--Sobic008G030801 Sobic002G172300 Sobic002G172300 Sobic001G071500--Sobic002G172300 Sobic003G149700 Sobic003G149700 Sobic001G071500--Sobic003G149700 Sobic001G371650 Sobic001G371650 Sobic001G071500--Sobic001G371650 Sobic008G030801--Sobic001G071500 Sobic008G030801--Sobic010G011500 Sobic001G297900 Sobic001G297900 Sobic008G030801--Sobic001G297900 Sobic002G055000 Sobic002G055000 Sobic008G030801--Sobic002G055000 Sobic008G030801--Sobic010G215201 Sobic001G480900 Sobic001G480900 Sobic008G030801--Sobic001G480900 Sobic008G030801--Sobic003G229900 Sobic008G030801--Sobic006G049633 Sobic008G030801--Sobic002G054800 Sobic001G442750--Sobic003G438100 Sobic001G442750--Sobic001G310000 Sobic001G442750--Sobic008G030801 Sobic001G442750--Sobic002G015950 Sobic001G442750--Sobic006G049000 Sobic005G205100 Sobic005G205100 Sobic001G442750--Sobic005G205100 Sobic010G168100 Sobic010G168100 Sobic001G442750--Sobic010G168100 Sobic001G442750--Sobic001G071500 Sobic001G442750--Sobic006G161200 Sobic006G161200--Sobic008G030801 Sobic006G161200--Sobic003G229900 Sobic006G161200--Sobic001G273950 Sobic006G161200--Sobic006G049633 Sobic006G161200--Sobic002G055000 Sobic006G161200--Sobic010G011500 Sobic008G061900 Sobic008G061900 Sobic006G161200--Sobic008G061900 Sobic006G161200--Sobic010G215201 Sobic006G161200--Sobic005G205100 Sobic004G167500--Sobic003G059500 Sobic004G167500--Sobic002G215600 Sobic004G167500--Sobic006G049000 Sobic010G187950 Sobic010G187950 Sobic004G167500--Sobic010G187950 Sobic004G167500--Sobic003G356500 Sobic004G167500--Sobic008G153300 Sobic004G167500--Sobic001G071500 Sobic004G167500--Sobic003G438100 Sobic004G167500--Sobic001G468900 Sobic009G193600--Sobic002G015950 Sobic006G037500 Sobic006G037500 Sobic009G193600--Sobic006G037500 Sobic009G193600--Sobic004G071850 Sobic009G193600--Sobic005G205100 Sobic009G193600--Sobic001G273950 Sobic009G193600--Sobic003G260050 Sobic009G193600--Sobic003G111700 Sobic009G193600--Sobic009G043900 Sobic009G193600--Sobic006G049000
Octagon: transcription factors


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