Gene annotation
Transcriptome id Sobic.006G152801.1
Synonym -
Functional annotation -
UniProt C5YBX5
Pfam PF03169
Panther DB PTHR31645 PTHR31645:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65730 : YELLOW STRIPE like 7
RAP-DB (Rice) LOC_Os04g44330.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a010612 , Zm00025a010614 , Zm00025a056538 , Zm00025a056537
Brachypodium KQJ83668 , PNT61516 , KQJ83671
Barley HORVU2Hr1G090380.10 , HORVU2Hr1G090380.11 , HORVU2Hr1G090380.12 , HORVU6Hr1G059420.4 , HORVU6Hr1G059420.5 , HORVU6Hr1G059420.1 , HORVU6Hr1G059420.2 , HORVU6Hr1G059420.3 , HORVU2Hr1G090380.8 , HORVU2Hr1G090380.9 , HORVU2Hr1G090380.2 , HORVU2Hr1G090380.3 , HORVU2Hr1G090380.1 , HORVU2Hr1G090380.7 , HORVU2Hr1G090380.4 , HORVU2Hr1G090380.5 , HORVU2Hr1G090380.6
Wheat TraesCS2B02G393600 , TraesCS6A02G220900 , TraesCS6B02G262400 , TraesCS2A02G376700 , TraesCS2D02G374000 , TraesCS2A02G377600 , TraesCS2B02G394600 , TraesCS2D02G373100
Populus PNS96981 , PNS96982 , PNS96985 , PNS96987 , PNS96986 , PNS96989 , PNS96977


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G524900 ribosomal protein L5, putative, expressed K02931: RP-L5, MRPL5, large subunit ribosomal protein L5
2 Sobic.008G119100 - -
3 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
4 Sobic.002G076450 - -
5 Sobic.007G174200 carrier, putative, expressed -
6 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
7 Sobic.010G051900 expressed protein -
8 Sobic.003G092150 - -
9 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
10 Sobic.002G280001 - -
11 Sobic.004G200600 - -
12 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
13 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.003G157800 - -
15 Sobic.008G134500 protein kinase domain containing protein, expressed -
16 Sobic.003G418900 expressed protein -
17 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
18 Sobic.004G007200 - -
19 Sobic.002G037700 expressed protein K10891: fanconi anemia group D2 protein
20 Sobic.001G241500 MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -


Gene co-expression network
sample Sobic006G152801 Sobic006G152801 Sobic001G524900 Sobic001G524900 Sobic006G152801--Sobic001G524900 Sobic008G119100 Sobic008G119100 Sobic006G152801--Sobic008G119100 Sobic002G227100 Sobic002G227100 Sobic006G152801--Sobic002G227100 Sobic002G076450 Sobic002G076450 Sobic006G152801--Sobic002G076450 Sobic007G174200 Sobic007G174200 Sobic006G152801--Sobic007G174200 Sobic010G242000 Sobic010G242000 Sobic006G152801--Sobic010G242000 Sobic010G051900 Sobic010G051900 Sobic006G152801--Sobic010G051900 Sobic003G092150 Sobic003G092150 Sobic006G152801--Sobic003G092150 Sobic007G226000 Sobic007G226000 Sobic006G152801--Sobic007G226000 Sobic001G524900--Sobic008G119100 Sobic001G524900--Sobic002G076450 Sobic001G524900--Sobic010G051900 Sobic001G524900--Sobic002G227100 Sobic001G524900--Sobic007G174200 Sobic001G367900 Sobic001G367900 Sobic001G524900--Sobic001G367900 Sobic001G524900--Sobic010G242000 Sobic009G047033 Sobic009G047033 Sobic001G524900--Sobic009G047033 Sobic001G524900--Sobic006G152801 Sobic008G119100--Sobic002G076450 Sobic008G119100--Sobic010G051900 Sobic008G119100--Sobic001G524900 Sobic008G119100--Sobic001G367900 Sobic003G331200 Sobic003G331200 Sobic008G119100--Sobic003G331200 Sobic008G119100--Sobic003G092150 Sobic005G040950 Sobic005G040950 Sobic008G119100--Sobic005G040950 Sobic008G119100--Sobic009G047033 Sobic008G119100--Sobic007G226000 Sobic002G280001 Sobic002G280001 Sobic002G227100--Sobic002G280001 Sobic002G227100--Sobic007G174200 Sobic006G270300 Sobic006G270300 Sobic002G227100--Sobic006G270300 Sobic007G200300 Sobic007G200300 Sobic002G227100--Sobic007G200300 Sobic004G149000 Sobic004G149000 Sobic002G227100--Sobic004G149000 Sobic002G266250 Sobic002G266250 Sobic002G227100--Sobic002G266250 Sobic006G170800 Sobic006G170800 Sobic002G227100--Sobic006G170800 Sobic003G079600 Sobic003G079600 Sobic002G227100--Sobic003G079600 Sobic004G305300 Sobic004G305300 Sobic002G227100--Sobic004G305300 Sobic002G076450--Sobic008G119100 Sobic002G076450--Sobic010G051900 Sobic002G076450--Sobic009G047033 Sobic005G201100 Sobic005G201100 Sobic002G076450--Sobic005G201100 Sobic002G076450--Sobic001G524900 Sobic002G076450--Sobic005G040950 Sobic006G128450 Sobic006G128450 Sobic002G076450--Sobic006G128450 Sobic002G076450--Sobic003G092150 Sobic003G289300 Sobic003G289300 Sobic002G076450--Sobic003G289300 Sobic007G174200--Sobic002G227100 Sobic001G350300 Sobic001G350300 Sobic007G174200--Sobic001G350300 Sobic007G174200--Sobic006G170800 Sobic007G174200--Sobic002G266250 Sobic007G174200--Sobic004G305300 Sobic002G320700 Sobic002G320700 Sobic007G174200--Sobic002G320700 Sobic004G350600 Sobic004G350600 Sobic007G174200--Sobic004G350600 Sobic002G118400 Sobic002G118400 Sobic007G174200--Sobic002G118400 Sobic001G033200 Sobic001G033200 Sobic007G174200--Sobic001G033200 Sobic005G025400 Sobic005G025400 Sobic010G242000--Sobic005G025400 Sobic010G242000--Sobic006G170800 Sobic008G159800 Sobic008G159800 Sobic010G242000--Sobic008G159800 Sobic007G114650 Sobic007G114650 Sobic010G242000--Sobic007G114650 Sobic002G399000 Sobic002G399000 Sobic010G242000--Sobic002G399000 Sobic003G440500 Sobic003G440500 Sobic010G242000--Sobic003G440500 Sobic010G242000--Sobic001G350300 Sobic008G134500 Sobic008G134500 Sobic010G242000--Sobic008G134500 Sobic010G242000--Sobic002G320700 Sobic010G051900--Sobic005G040950 Sobic010G051900--Sobic008G119100 Sobic010G051900--Sobic002G076450 Sobic010G051900--Sobic009G047033 Sobic010G051600 Sobic010G051600 Sobic010G051900--Sobic010G051600 Sobic010G051900--Sobic003G289300 Sobic001G241500 Sobic001G241500 Sobic010G051900--Sobic001G241500 Sobic003G157800 Sobic003G157800 Sobic010G051900--Sobic003G157800 Sobic010G051900--Sobic001G524900 Sobic008G065700 Sobic008G065700 Sobic003G092150--Sobic008G065700 Sobic007G210200 Sobic007G210200 Sobic003G092150--Sobic007G210200 Sobic003G092150--Sobic001G367900 Sobic003G149400 Sobic003G149400 Sobic003G092150--Sobic003G149400 Sobic003G092150--Sobic008G119100 Sobic003G092150--Sobic009G047033 Sobic003G092150--Sobic007G226000 Sobic003G092150--Sobic002G076450 Sobic005G110553 Sobic005G110553 Sobic003G092150--Sobic005G110553 Sobic007G226000--Sobic008G065700 Sobic007G185000 Sobic007G185000 Sobic007G226000--Sobic007G185000 Sobic010G249600 Sobic010G249600 Sobic007G226000--Sobic010G249600 Sobic004G224000 Sobic004G224000 Sobic007G226000--Sobic004G224000 Sobic007G226000--Sobic003G149400 Sobic007G226000--Sobic001G367900 Sobic009G240300 Sobic009G240300 Sobic007G226000--Sobic009G240300 Sobic007G226000--Sobic003G440500 Sobic007G226000--Sobic003G092150
Octagon: transcription factors


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