Gene annotation
Transcriptome id Sobic.003G092150.1
Synonym -
Functional annotation -
UniProt A0A1W0VWE5
Pfam -
Panther DB PTHR10315 PTHR10315:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g20610.1 : seven in absentia protein family domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G065700 RNA recognition motif containing protein, expressed -
2 Sobic.007G210200 Highest expression level in seeds(PubMedID : 27501690)@OsSPL14 - SBP-box gene family member, expressed -
3 Sobic.001G367900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@annexin, putative, expressed -
4 Sobic.003G149400 lipase, putative, expressed -
5 Sobic.008G119100 - -
6 Sobic.009G047033 - -
7 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
8 Sobic.002G076450 - -
9 Sobic.005G110553 - -
10 Sobic.001G494350 - -
11 Sobic.004G224000 - -
12 Sobic.003G331200 - -
13 Sobic.009G122000 Annexin arabidopsis 3(PubMedID : 26320239)@annexin, putative, expressed -
14 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
15 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
16 Sobic.010G051900 expressed protein -
17 Sobic.003G308900 expressed protein -
18 Sobic.003G035200 profilin domain containing protein, expressed -
19 Sobic.004G000500 tetratricopeptide repeat domain containing protein, expressed K09560: suppressor of tumorigenicity protein 13
20 Sobic.009G240300 chloroplast unusual positioning protein, putative, expressed -


Gene co-expression network
sample Sobic003G092150 Sobic003G092150 Sobic008G065700 Sobic008G065700 Sobic003G092150--Sobic008G065700 Sobic007G210200 Sobic007G210200 Sobic003G092150--Sobic007G210200 Sobic001G367900 Sobic001G367900 Sobic003G092150--Sobic001G367900 Sobic003G149400 Sobic003G149400 Sobic003G092150--Sobic003G149400 Sobic008G119100 Sobic008G119100 Sobic003G092150--Sobic008G119100 Sobic009G047033 Sobic009G047033 Sobic003G092150--Sobic009G047033 Sobic007G226000 Sobic007G226000 Sobic003G092150--Sobic007G226000 Sobic002G076450 Sobic002G076450 Sobic003G092150--Sobic002G076450 Sobic005G110553 Sobic005G110553 Sobic003G092150--Sobic005G110553 Sobic008G065700--Sobic003G149400 Sobic004G224000 Sobic004G224000 Sobic008G065700--Sobic004G224000 Sobic008G065700--Sobic005G110553 Sobic008G065700--Sobic001G367900 Sobic008G065700--Sobic003G092150 Sobic008G065700--Sobic007G226000 Sobic009G122000 Sobic009G122000 Sobic008G065700--Sobic009G122000 Sobic008G065700--Sobic007G210200 Sobic002G377400 Sobic002G377400 Sobic008G065700--Sobic002G377400 Sobic007G210200--Sobic001G367900 Sobic007G210200--Sobic005G110553 Sobic007G210200--Sobic003G149400 Sobic007G210200--Sobic009G122000 Sobic007G210200--Sobic008G065700 Sobic007G210200--Sobic003G092150 Sobic007G210200--Sobic004G224000 Sobic004G000500 Sobic004G000500 Sobic007G210200--Sobic004G000500 Sobic003G331200 Sobic003G331200 Sobic007G210200--Sobic003G331200 Sobic007G010400 Sobic007G010400 Sobic001G367900--Sobic007G010400 Sobic001G367900--Sobic003G149400 Sobic001G367900--Sobic008G065700 Sobic001G367900--Sobic007G210200 Sobic001G367900--Sobic003G331200 Sobic001G367900--Sobic004G000500 Sobic001G367900--Sobic007G226000 Sobic001G367900--Sobic003G092150 Sobic001G367900--Sobic009G122000 Sobic003G149400--Sobic004G224000 Sobic003G149400--Sobic007G010400 Sobic003G149400--Sobic008G065700 Sobic003G149400--Sobic009G122000 Sobic003G149400--Sobic005G110553 Sobic001G503700 Sobic001G503700 Sobic003G149400--Sobic001G503700 Sobic003G149400--Sobic001G367900 Sobic002G001500 Sobic002G001500 Sobic003G149400--Sobic002G001500 Sobic001G424650 Sobic001G424650 Sobic003G149400--Sobic001G424650 Sobic008G119100--Sobic002G076450 Sobic010G051900 Sobic010G051900 Sobic008G119100--Sobic010G051900 Sobic001G524900 Sobic001G524900 Sobic008G119100--Sobic001G524900 Sobic008G119100--Sobic001G367900 Sobic008G119100--Sobic003G331200 Sobic008G119100--Sobic003G092150 Sobic005G040950 Sobic005G040950 Sobic008G119100--Sobic005G040950 Sobic008G119100--Sobic009G047033 Sobic008G119100--Sobic007G226000 Sobic010G051600 Sobic010G051600 Sobic009G047033--Sobic010G051600 Sobic009G047033--Sobic010G051900 Sobic003G091900 Sobic003G091900 Sobic009G047033--Sobic003G091900 Sobic007G185000 Sobic007G185000 Sobic009G047033--Sobic007G185000 Sobic009G047033--Sobic002G076450 Sobic004G343733 Sobic004G343733 Sobic009G047033--Sobic004G343733 Sobic003G308900 Sobic003G308900 Sobic009G047033--Sobic003G308900 Sobic010G213100 Sobic010G213100 Sobic009G047033--Sobic010G213100 Sobic009G047033--Sobic003G092150 Sobic007G226000--Sobic008G065700 Sobic007G226000--Sobic007G185000 Sobic010G249600 Sobic010G249600 Sobic007G226000--Sobic010G249600 Sobic007G226000--Sobic004G224000 Sobic007G226000--Sobic003G149400 Sobic007G226000--Sobic001G367900 Sobic009G240300 Sobic009G240300 Sobic007G226000--Sobic009G240300 Sobic003G440500 Sobic003G440500 Sobic007G226000--Sobic003G440500 Sobic007G226000--Sobic003G092150 Sobic002G076450--Sobic008G119100 Sobic002G076450--Sobic010G051900 Sobic002G076450--Sobic009G047033 Sobic005G201100 Sobic005G201100 Sobic002G076450--Sobic005G201100 Sobic002G076450--Sobic001G524900 Sobic002G076450--Sobic005G040950 Sobic006G128450 Sobic006G128450 Sobic002G076450--Sobic006G128450 Sobic002G076450--Sobic003G092150 Sobic003G289300 Sobic003G289300 Sobic002G076450--Sobic003G289300 Sobic005G110553--Sobic009G122000 Sobic005G110553--Sobic001G424650 Sobic005G110553--Sobic003G149400 Sobic006G268100 Sobic006G268100 Sobic005G110553--Sobic006G268100 Sobic005G110553--Sobic008G065700 Sobic005G110553--Sobic004G224000 Sobic001G334400 Sobic001G334400 Sobic005G110553--Sobic001G334400 Sobic009G183650 Sobic009G183650 Sobic005G110553--Sobic009G183650 Sobic005G110553--Sobic007G210200
Octagon: transcription factors


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