Gene annotation
Transcriptome id Sobic.007G185000.2
Synonym Sb07g025500
Functional annotation leucine rich repeat protein, putative, expressed
UniProt A0A1Z5RAP7
Pfam PF08263 PF00560
Panther DB PTHR27004 PTHR27004:SF26
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34930 : disease resistance family protein / LRR family protein
RAP-DB (Rice) LOC_Os08g42840.1 : leucine rich repeat protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G001960.1
Wheat TraesCS4B02G011900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
2 Sobic.003G308900 expressed protein -
3 Sobic.003G243750 - -
4 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
5 Sobic.009G203600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Receptor-like protein kinase HSL1(PubMedID : 31721651)@receptor-like protein kinase 5 precursor, putative, expressed -
6 Sobic.007G165100 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
7 Sobic.007G226000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
8 Sobic.009G047033 - -
9 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
10 Sobic.008G159800 - -
11 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
12 Sobic.003G091900 - -
13 Sobic.010G051600 - -
14 Sobic.002G076200 - -
15 Sobic.008G134500 protein kinase domain containing protein, expressed -
16 Sobic.001G494350 - -
17 Sobic.002G296800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cell cycle control protein, putative, expressed -
18 Sobic.007G114650 - -
19 Sobic.003G130650 - -
20 Sobic.003G336600 homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic007G185000 Sobic007G185000 Sobic002G377400 Sobic002G377400 Sobic007G185000--Sobic002G377400 Sobic003G308900 Sobic003G308900 Sobic007G185000--Sobic003G308900 Sobic003G243750 Sobic003G243750 Sobic007G185000--Sobic003G243750 Sobic003G440500 Sobic003G440500 Sobic007G185000--Sobic003G440500 Sobic009G203600 Sobic009G203600 Sobic007G185000--Sobic009G203600 Sobic007G165100 Sobic007G165100 Sobic007G185000--Sobic007G165100 Sobic007G226000 Sobic007G226000 Sobic007G185000--Sobic007G226000 Sobic009G047033 Sobic009G047033 Sobic007G185000--Sobic009G047033 Sobic010G249600 Sobic010G249600 Sobic007G185000--Sobic010G249600 Sobic002G377400--Sobic003G308900 Sobic002G377400--Sobic007G185000 Sobic002G377400--Sobic003G440500 Sobic002G377400--Sobic003G243750 Sobic002G377400--Sobic010G249600 Sobic002G296800 Sobic002G296800 Sobic002G377400--Sobic002G296800 Sobic002G398600 Sobic002G398600 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic008G065700 Sobic008G065700 Sobic002G377400--Sobic008G065700 Sobic003G308900--Sobic002G377400 Sobic003G308900--Sobic007G185000 Sobic003G308900--Sobic010G249600 Sobic003G308900--Sobic003G440500 Sobic003G308900--Sobic002G296800 Sobic005G090700 Sobic005G090700 Sobic003G308900--Sobic005G090700 Sobic003G308900--Sobic003G243750 Sobic003G308900--Sobic008G065700 Sobic008G159800 Sobic008G159800 Sobic003G308900--Sobic008G159800 Sobic003G243750--Sobic007G185000 Sobic003G243750--Sobic009G203600 Sobic003G243750--Sobic002G377400 Sobic003G333150 Sobic003G333150 Sobic003G243750--Sobic003G333150 Sobic003G130650 Sobic003G130650 Sobic003G243750--Sobic003G130650 Sobic008G045300 Sobic008G045300 Sobic003G243750--Sobic008G045300 Sobic003G243750--Sobic003G308900 Sobic010G025200 Sobic010G025200 Sobic003G243750--Sobic010G025200 Sobic006G144900 Sobic006G144900 Sobic003G243750--Sobic006G144900 Sobic003G440500--Sobic010G249600 Sobic003G440500--Sobic002G377400 Sobic009G223900 Sobic009G223900 Sobic003G440500--Sobic009G223900 Sobic005G025400 Sobic005G025400 Sobic003G440500--Sobic005G025400 Sobic003G440500--Sobic007G185000 Sobic010G242000 Sobic010G242000 Sobic003G440500--Sobic010G242000 Sobic003G440500--Sobic003G308900 Sobic002G399000 Sobic002G399000 Sobic003G440500--Sobic002G399000 Sobic009G181900 Sobic009G181900 Sobic003G440500--Sobic009G181900 Sobic009G203600--Sobic006G144900 Sobic009G203600--Sobic008G045300 Sobic009G203600--Sobic003G333150 Sobic002G345100 Sobic002G345100 Sobic009G203600--Sobic002G345100 Sobic004G293600 Sobic004G293600 Sobic009G203600--Sobic004G293600 Sobic002G076200 Sobic002G076200 Sobic009G203600--Sobic002G076200 Sobic009G203600--Sobic003G243750 Sobic001G336600 Sobic001G336600 Sobic009G203600--Sobic001G336600 Sobic003G250340 Sobic003G250340 Sobic009G203600--Sobic003G250340 Sobic007G165100--Sobic003G130650 Sobic007G165100--Sobic007G185000 Sobic001G082700 Sobic001G082700 Sobic007G165100--Sobic001G082700 Sobic005G038700 Sobic005G038700 Sobic007G165100--Sobic005G038700 Sobic007G165100--Sobic008G159800 Sobic007G165100--Sobic003G243750 Sobic007G165100--Sobic002G377400 Sobic007G165100--Sobic009G203600 Sobic003G091900 Sobic003G091900 Sobic007G165100--Sobic003G091900 Sobic007G226000--Sobic008G065700 Sobic007G226000--Sobic007G185000 Sobic007G226000--Sobic010G249600 Sobic004G224000 Sobic004G224000 Sobic007G226000--Sobic004G224000 Sobic003G149400 Sobic003G149400 Sobic007G226000--Sobic003G149400 Sobic001G367900 Sobic001G367900 Sobic007G226000--Sobic001G367900 Sobic009G240300 Sobic009G240300 Sobic007G226000--Sobic009G240300 Sobic007G226000--Sobic003G440500 Sobic003G092150 Sobic003G092150 Sobic007G226000--Sobic003G092150 Sobic010G051600 Sobic010G051600 Sobic009G047033--Sobic010G051600 Sobic010G051900 Sobic010G051900 Sobic009G047033--Sobic010G051900 Sobic009G047033--Sobic003G091900 Sobic009G047033--Sobic007G185000 Sobic002G076450 Sobic002G076450 Sobic009G047033--Sobic002G076450 Sobic004G343733 Sobic004G343733 Sobic009G047033--Sobic004G343733 Sobic009G047033--Sobic003G308900 Sobic010G213100 Sobic010G213100 Sobic009G047033--Sobic010G213100 Sobic009G047033--Sobic003G092150 Sobic010G249600--Sobic003G440500 Sobic010G249600--Sobic002G398600 Sobic010G249600--Sobic002G377400 Sobic010G249600--Sobic003G308900 Sobic008G016800 Sobic008G016800 Sobic010G249600--Sobic008G016800 Sobic010G249600--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic010G249600--Sobic002G085600 Sobic010G249600--Sobic004G224000 Sobic001G191300 Sobic001G191300 Sobic010G249600--Sobic001G191300
Octagon: transcription factors


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