Gene annotation
Transcriptome id Sobic.007G165100.1
Synonym lateral organ boundaries, ASL16, SbLBD24, Sb07g023810, LBD29
Functional annotation "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt C5YMU2
Pfam PF03195
Panther DB PTHR31529 PTHR31529:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58190 : lateral organ boundaries-domain 29
RAP-DB (Rice) LOC_Os08g44940.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a005552
Brachypodium KQJ94684
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G130650 - -
2 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
3 Sobic.001G082700 TKL_IRAK_CrRLK1L-1.1 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
4 Sobic.005G038700 transcription factor, putative, expressed K14431: transcription factor TGA
5 Sobic.008G159800 - -
6 Sobic.003G243750 - -
7 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
8 Sobic.009G203600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Receptor-like protein kinase HSL1(PubMedID : 31721651)@receptor-like protein kinase 5 precursor, putative, expressed -
9 Sobic.003G091900 - -
10 Sobic.003G308900 expressed protein -
11 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
12 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
13 Sobic.008G134500 protein kinase domain containing protein, expressed -
14 Sobic.003G336600 homeobox domain containing protein, expressed -
15 Sobic.010G118401 - -
16 Sobic.007G114650 - -
17 Sobic.008G045300 citrate-binding protein precursor, putative, expressed -
18 Sobic.003G262500 OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed -
19 Sobic.003G250340 - K07976: Rab family, other
20 Sobic.006G082100 dehydration-responsive element-binding protein, putative, expressed K03671: thioredoxin 1


Gene co-expression network
sample Sobic007G165100 Sobic007G165100 Sobic003G130650 Sobic003G130650 Sobic007G165100--Sobic003G130650 Sobic007G185000 Sobic007G185000 Sobic007G165100--Sobic007G185000 Sobic001G082700 Sobic001G082700 Sobic007G165100--Sobic001G082700 Sobic005G038700 Sobic005G038700 Sobic007G165100--Sobic005G038700 Sobic008G159800 Sobic008G159800 Sobic007G165100--Sobic008G159800 Sobic003G243750 Sobic003G243750 Sobic007G165100--Sobic003G243750 Sobic002G377400 Sobic002G377400 Sobic007G165100--Sobic002G377400 Sobic009G203600 Sobic009G203600 Sobic007G165100--Sobic009G203600 Sobic003G091900 Sobic003G091900 Sobic007G165100--Sobic003G091900 Sobic003G250340 Sobic003G250340 Sobic003G130650--Sobic003G250340 Sobic008G045300 Sobic008G045300 Sobic003G130650--Sobic008G045300 Sobic003G130650--Sobic003G243750 Sobic003G130650--Sobic007G165100 Sobic002G152000 Sobic002G152000 Sobic003G130650--Sobic002G152000 Sobic007G114650 Sobic007G114650 Sobic003G130650--Sobic007G114650 Sobic003G130650--Sobic005G038700 Sobic003G333150 Sobic003G333150 Sobic003G130650--Sobic003G333150 Sobic003G130650--Sobic009G203600 Sobic007G185000--Sobic002G377400 Sobic003G308900 Sobic003G308900 Sobic007G185000--Sobic003G308900 Sobic007G185000--Sobic003G243750 Sobic003G440500 Sobic003G440500 Sobic007G185000--Sobic003G440500 Sobic007G185000--Sobic009G203600 Sobic007G185000--Sobic007G165100 Sobic007G226000 Sobic007G226000 Sobic007G185000--Sobic007G226000 Sobic009G047033 Sobic009G047033 Sobic007G185000--Sobic009G047033 Sobic010G249600 Sobic010G249600 Sobic007G185000--Sobic010G249600 Sobic003G301950 Sobic003G301950 Sobic001G082700--Sobic003G301950 Sobic001G082700--Sobic007G165100 Sobic006G082100 Sobic006G082100 Sobic001G082700--Sobic006G082100 Sobic008G075500 Sobic008G075500 Sobic001G082700--Sobic008G075500 Sobic002G387000 Sobic002G387000 Sobic001G082700--Sobic002G387000 Sobic010G242000 Sobic010G242000 Sobic001G082700--Sobic010G242000 Sobic006G280250 Sobic006G280250 Sobic001G082700--Sobic006G280250 Sobic001G082700--Sobic008G159800 Sobic004G091300 Sobic004G091300 Sobic001G082700--Sobic004G091300 Sobic005G038700--Sobic003G250340 Sobic010G196200 Sobic010G196200 Sobic005G038700--Sobic010G196200 Sobic010G118600 Sobic010G118600 Sobic005G038700--Sobic010G118600 Sobic009G187900 Sobic009G187900 Sobic005G038700--Sobic009G187900 Sobic005G038700--Sobic008G045300 Sobic005G038700--Sobic007G165100 Sobic005G038700--Sobic003G130650 Sobic005G038700--Sobic009G203600 Sobic001G087500 Sobic001G087500 Sobic005G038700--Sobic001G087500 Sobic008G159800--Sobic010G242000 Sobic005G025400 Sobic005G025400 Sobic008G159800--Sobic005G025400 Sobic008G159800--Sobic003G440500 Sobic005G090700 Sobic005G090700 Sobic008G159800--Sobic005G090700 Sobic008G159800--Sobic007G185000 Sobic005G014400 Sobic005G014400 Sobic008G159800--Sobic005G014400 Sobic008G159800--Sobic003G308900 Sobic008G159800--Sobic002G377400 Sobic003G336600 Sobic003G336600 Sobic008G159800--Sobic003G336600 Sobic003G243750--Sobic007G185000 Sobic003G243750--Sobic009G203600 Sobic003G243750--Sobic002G377400 Sobic003G243750--Sobic003G333150 Sobic003G243750--Sobic003G130650 Sobic003G243750--Sobic008G045300 Sobic003G243750--Sobic003G308900 Sobic010G025200 Sobic010G025200 Sobic003G243750--Sobic010G025200 Sobic006G144900 Sobic006G144900 Sobic003G243750--Sobic006G144900 Sobic002G377400--Sobic003G308900 Sobic002G377400--Sobic007G185000 Sobic002G377400--Sobic003G440500 Sobic002G377400--Sobic003G243750 Sobic002G377400--Sobic010G249600 Sobic002G296800 Sobic002G296800 Sobic002G377400--Sobic002G296800 Sobic002G398600 Sobic002G398600 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic008G065700 Sobic008G065700 Sobic002G377400--Sobic008G065700 Sobic009G203600--Sobic006G144900 Sobic009G203600--Sobic008G045300 Sobic009G203600--Sobic003G333150 Sobic002G345100 Sobic002G345100 Sobic009G203600--Sobic002G345100 Sobic004G293600 Sobic004G293600 Sobic009G203600--Sobic004G293600 Sobic002G076200 Sobic002G076200 Sobic009G203600--Sobic002G076200 Sobic009G203600--Sobic003G243750 Sobic001G336600 Sobic001G336600 Sobic009G203600--Sobic001G336600 Sobic009G203600--Sobic003G250340 Sobic010G213100 Sobic010G213100 Sobic003G091900--Sobic010G213100 Sobic007G182400 Sobic007G182400 Sobic003G091900--Sobic007G182400 Sobic003G091900--Sobic009G047033 Sobic001G062000 Sobic001G062000 Sobic003G091900--Sobic001G062000 Sobic003G056900 Sobic003G056900 Sobic003G091900--Sobic003G056900 Sobic010G054400 Sobic010G054400 Sobic003G091900--Sobic010G054400 Sobic003G091900--Sobic002G377400 Sobic003G091900--Sobic003G336600 Sobic003G091900--Sobic007G185000
Octagon: transcription factors


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