Gene annotation
Transcriptome id Sobic.003G336600.1
Synonym ATWOX13, Sb03g038080, WOX13, HB-4
Functional annotation homeobox domain containing protein, expressed
UniProt C5XN90
Pfam PF00046
Panther DB PTHR24326 PTHR24326:SF220
NCBI CDD KOG0484; Transcription factor PHOX2/ARIX, contains HOX domain
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT4G35550 : WUSCHEL related homeobox 13
RAP-DB (Rice) LOC_Os01g60270.1 : homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027075 , Zm00025a039778
Brachypodium KQK10328 , PNT73113
Barley HORVU3Hr1G080660.1 , HORVU3Hr1G080660.2 , HORVU3Hr1G080660.5 , HORVU3Hr1G080660.4
Wheat TraesCS3D02G335500 , TraesCS3A02G341700 , TraesCS3B02G373800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G091900 - -
2 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
3 Sobic.008G159800 - -
4 Sobic.003G308900 expressed protein -
5 Sobic.005G090700 - -
6 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
7 Sobic.003G243750 - -
8 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
9 Sobic.007G165100 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.010G051600 - -
11 Sobic.009G047033 - -
12 Sobic.002G296800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cell cycle control protein, putative, expressed -
13 Sobic.007G182400 - -
14 Sobic.010G054400 leucine-rich repeat family protein, putative, expressed -
15 Sobic.005G014400 esterase, putative, expressed -
16 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
17 Sobic.009G203600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Receptor-like protein kinase HSL1(PubMedID : 31721651)@receptor-like protein kinase 5 precursor, putative, expressed -
18 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
19 Sobic.001G062000 - -
20 Sobic.003G271000 - -


Gene co-expression network
sample Sobic003G336600 Sobic003G336600 Sobic003G091900 Sobic003G091900 Sobic003G336600--Sobic003G091900 Sobic010G213100 Sobic010G213100 Sobic003G336600--Sobic010G213100 Sobic008G159800 Sobic008G159800 Sobic003G336600--Sobic008G159800 Sobic003G308900 Sobic003G308900 Sobic003G336600--Sobic003G308900 Sobic005G090700 Sobic005G090700 Sobic003G336600--Sobic005G090700 Sobic007G185000 Sobic007G185000 Sobic003G336600--Sobic007G185000 Sobic003G243750 Sobic003G243750 Sobic003G336600--Sobic003G243750 Sobic002G377400 Sobic002G377400 Sobic003G336600--Sobic002G377400 Sobic007G165100 Sobic007G165100 Sobic003G336600--Sobic007G165100 Sobic003G091900--Sobic010G213100 Sobic007G182400 Sobic007G182400 Sobic003G091900--Sobic007G182400 Sobic009G047033 Sobic009G047033 Sobic003G091900--Sobic009G047033 Sobic001G062000 Sobic001G062000 Sobic003G091900--Sobic001G062000 Sobic003G056900 Sobic003G056900 Sobic003G091900--Sobic003G056900 Sobic010G054400 Sobic010G054400 Sobic003G091900--Sobic010G054400 Sobic003G091900--Sobic002G377400 Sobic003G091900--Sobic003G336600 Sobic003G091900--Sobic007G185000 Sobic010G213100--Sobic003G091900 Sobic010G213100--Sobic010G054400 Sobic010G213100--Sobic001G062000 Sobic010G213100--Sobic007G182400 Sobic010G213100--Sobic003G308900 Sobic010G213100--Sobic003G336600 Sobic010G213100--Sobic009G047033 Sobic010G213100--Sobic002G377400 Sobic004G343733 Sobic004G343733 Sobic010G213100--Sobic004G343733 Sobic010G242000 Sobic010G242000 Sobic008G159800--Sobic010G242000 Sobic005G025400 Sobic005G025400 Sobic008G159800--Sobic005G025400 Sobic003G440500 Sobic003G440500 Sobic008G159800--Sobic003G440500 Sobic008G159800--Sobic005G090700 Sobic008G159800--Sobic007G185000 Sobic005G014400 Sobic005G014400 Sobic008G159800--Sobic005G014400 Sobic008G159800--Sobic003G308900 Sobic008G159800--Sobic002G377400 Sobic008G159800--Sobic003G336600 Sobic003G308900--Sobic002G377400 Sobic003G308900--Sobic007G185000 Sobic010G249600 Sobic010G249600 Sobic003G308900--Sobic010G249600 Sobic003G308900--Sobic003G440500 Sobic002G296800 Sobic002G296800 Sobic003G308900--Sobic002G296800 Sobic003G308900--Sobic005G090700 Sobic003G308900--Sobic003G243750 Sobic008G065700 Sobic008G065700 Sobic003G308900--Sobic008G065700 Sobic003G308900--Sobic008G159800 Sobic005G090700--Sobic003G308900 Sobic005G090700--Sobic008G159800 Sobic005G090700--Sobic010G249600 Sobic005G090700--Sobic002G377400 Sobic005G090700--Sobic003G336600 Sobic009G112500 Sobic009G112500 Sobic005G090700--Sobic009G112500 Sobic005G090700--Sobic002G296800 Sobic005G090700--Sobic005G014400 Sobic006G268100 Sobic006G268100 Sobic005G090700--Sobic006G268100 Sobic007G185000--Sobic002G377400 Sobic007G185000--Sobic003G308900 Sobic007G185000--Sobic003G243750 Sobic007G185000--Sobic003G440500 Sobic009G203600 Sobic009G203600 Sobic007G185000--Sobic009G203600 Sobic007G185000--Sobic007G165100 Sobic007G226000 Sobic007G226000 Sobic007G185000--Sobic007G226000 Sobic007G185000--Sobic009G047033 Sobic007G185000--Sobic010G249600 Sobic003G243750--Sobic007G185000 Sobic003G243750--Sobic009G203600 Sobic003G243750--Sobic002G377400 Sobic003G333150 Sobic003G333150 Sobic003G243750--Sobic003G333150 Sobic003G130650 Sobic003G130650 Sobic003G243750--Sobic003G130650 Sobic008G045300 Sobic008G045300 Sobic003G243750--Sobic008G045300 Sobic003G243750--Sobic003G308900 Sobic010G025200 Sobic010G025200 Sobic003G243750--Sobic010G025200 Sobic006G144900 Sobic006G144900 Sobic003G243750--Sobic006G144900 Sobic002G377400--Sobic003G308900 Sobic002G377400--Sobic007G185000 Sobic002G377400--Sobic003G440500 Sobic002G377400--Sobic003G243750 Sobic002G377400--Sobic010G249600 Sobic002G377400--Sobic002G296800 Sobic002G398600 Sobic002G398600 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic002G377400--Sobic008G065700 Sobic007G165100--Sobic003G130650 Sobic007G165100--Sobic007G185000 Sobic001G082700 Sobic001G082700 Sobic007G165100--Sobic001G082700 Sobic005G038700 Sobic005G038700 Sobic007G165100--Sobic005G038700 Sobic007G165100--Sobic008G159800 Sobic007G165100--Sobic003G243750 Sobic007G165100--Sobic002G377400 Sobic007G165100--Sobic009G203600 Sobic007G165100--Sobic003G091900
Octagon: transcription factors


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