Gene annotation
Transcriptome id Sobic.002G377400.1
Synonym
Functional annotation cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed
UniProt A0A1W0W797
Pfam PF00069
Panther DB PTHR27007 PTHR27007:SF12
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G06740 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os02g06160.1 : cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G005180.1
Wheat TraesCS7A02G173900 , TraesCS5B02G502400 , TraesCS7B02G102200 , TraesCS7B02G102200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G308900 expressed protein -
2 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
3 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
4 Sobic.003G243750 - -
5 Sobic.010G249600 macrophage migration inhibitory factor, putative, expressed -
6 Sobic.002G296800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cell cycle control protein, putative, expressed -
7 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
8 Sobic.003G262500 OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed -
9 Sobic.008G065700 RNA recognition motif containing protein, expressed -
10 Sobic.003G091900 - -
11 Sobic.008G159800 - -
12 Sobic.009G223900 protein binding protein, putative, expressed -
13 Sobic.008G016800 zinc finger DHHC domain-containing protein, putative, expressed -
14 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
15 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.005G110553 - -
17 Sobic.003G056900 expressed protein -
18 Sobic.007G165100 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
19 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
20 Sobic.005G090700 - -


Gene co-expression network
sample Sobic002G377400 Sobic002G377400 Sobic003G308900 Sobic003G308900 Sobic002G377400--Sobic003G308900 Sobic007G185000 Sobic007G185000 Sobic002G377400--Sobic007G185000 Sobic003G440500 Sobic003G440500 Sobic002G377400--Sobic003G440500 Sobic003G243750 Sobic003G243750 Sobic002G377400--Sobic003G243750 Sobic010G249600 Sobic010G249600 Sobic002G377400--Sobic010G249600 Sobic002G296800 Sobic002G296800 Sobic002G377400--Sobic002G296800 Sobic002G398600 Sobic002G398600 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic008G065700 Sobic008G065700 Sobic002G377400--Sobic008G065700 Sobic003G308900--Sobic002G377400 Sobic003G308900--Sobic007G185000 Sobic003G308900--Sobic010G249600 Sobic003G308900--Sobic003G440500 Sobic003G308900--Sobic002G296800 Sobic005G090700 Sobic005G090700 Sobic003G308900--Sobic005G090700 Sobic003G308900--Sobic003G243750 Sobic003G308900--Sobic008G065700 Sobic008G159800 Sobic008G159800 Sobic003G308900--Sobic008G159800 Sobic007G185000--Sobic002G377400 Sobic007G185000--Sobic003G308900 Sobic007G185000--Sobic003G243750 Sobic007G185000--Sobic003G440500 Sobic009G203600 Sobic009G203600 Sobic007G185000--Sobic009G203600 Sobic007G165100 Sobic007G165100 Sobic007G185000--Sobic007G165100 Sobic007G226000 Sobic007G226000 Sobic007G185000--Sobic007G226000 Sobic009G047033 Sobic009G047033 Sobic007G185000--Sobic009G047033 Sobic007G185000--Sobic010G249600 Sobic003G440500--Sobic010G249600 Sobic003G440500--Sobic002G377400 Sobic009G223900 Sobic009G223900 Sobic003G440500--Sobic009G223900 Sobic005G025400 Sobic005G025400 Sobic003G440500--Sobic005G025400 Sobic003G440500--Sobic007G185000 Sobic010G242000 Sobic010G242000 Sobic003G440500--Sobic010G242000 Sobic003G440500--Sobic003G308900 Sobic002G399000 Sobic002G399000 Sobic003G440500--Sobic002G399000 Sobic009G181900 Sobic009G181900 Sobic003G440500--Sobic009G181900 Sobic003G243750--Sobic007G185000 Sobic003G243750--Sobic009G203600 Sobic003G243750--Sobic002G377400 Sobic003G333150 Sobic003G333150 Sobic003G243750--Sobic003G333150 Sobic003G130650 Sobic003G130650 Sobic003G243750--Sobic003G130650 Sobic008G045300 Sobic008G045300 Sobic003G243750--Sobic008G045300 Sobic003G243750--Sobic003G308900 Sobic010G025200 Sobic010G025200 Sobic003G243750--Sobic010G025200 Sobic006G144900 Sobic006G144900 Sobic003G243750--Sobic006G144900 Sobic010G249600--Sobic003G440500 Sobic010G249600--Sobic002G398600 Sobic010G249600--Sobic002G377400 Sobic010G249600--Sobic003G308900 Sobic008G016800 Sobic008G016800 Sobic010G249600--Sobic008G016800 Sobic010G249600--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic010G249600--Sobic002G085600 Sobic004G224000 Sobic004G224000 Sobic010G249600--Sobic004G224000 Sobic001G191300 Sobic001G191300 Sobic010G249600--Sobic001G191300 Sobic002G296800--Sobic003G308900 Sobic002G296800--Sobic002G377400 Sobic002G296800--Sobic010G249600 Sobic002G296800--Sobic007G185000 Sobic003G364550 Sobic003G364550 Sobic002G296800--Sobic003G364550 Sobic002G296800--Sobic003G243750 Sobic002G296800--Sobic005G090700 Sobic010G133450 Sobic010G133450 Sobic002G296800--Sobic010G133450 Sobic009G055000 Sobic009G055000 Sobic002G296800--Sobic009G055000 Sobic006G249600 Sobic006G249600 Sobic002G398600--Sobic006G249600 Sobic004G173200 Sobic004G173200 Sobic002G398600--Sobic004G173200 Sobic003G263900 Sobic003G263900 Sobic002G398600--Sobic003G263900 Sobic002G187900 Sobic002G187900 Sobic002G398600--Sobic002G187900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic001G212900 Sobic001G212900 Sobic002G398600--Sobic001G212900 Sobic008G103400 Sobic008G103400 Sobic002G398600--Sobic008G103400 Sobic002G398600--Sobic008G016800 Sobic006G082100 Sobic006G082100 Sobic003G262500--Sobic006G082100 Sobic003G262500--Sobic009G181900 Sobic009G112500 Sobic009G112500 Sobic003G262500--Sobic009G112500 Sobic003G262500--Sobic002G377400 Sobic003G262500--Sobic010G249600 Sobic010G105900 Sobic010G105900 Sobic003G262500--Sobic010G105900 Sobic003G262500--Sobic006G249600 Sobic002G387000 Sobic002G387000 Sobic003G262500--Sobic002G387000 Sobic003G262500--Sobic002G398600 Sobic003G149400 Sobic003G149400 Sobic008G065700--Sobic003G149400 Sobic008G065700--Sobic004G224000 Sobic005G110553 Sobic005G110553 Sobic008G065700--Sobic005G110553 Sobic001G367900 Sobic001G367900 Sobic008G065700--Sobic001G367900 Sobic003G092150 Sobic003G092150 Sobic008G065700--Sobic003G092150 Sobic008G065700--Sobic007G226000 Sobic009G122000 Sobic009G122000 Sobic008G065700--Sobic009G122000 Sobic007G210200 Sobic007G210200 Sobic008G065700--Sobic007G210200 Sobic008G065700--Sobic002G377400
Octagon: transcription factors


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