Gene annotation
Transcriptome id Sobic.003G056900.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q1J0
Pfam PF13966
Panther DB PTHR33033 PTHR33033:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25270 : Ribonuclease H-like superfamily protein
RAP-DB (Rice) LOC_Os06g21680.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G091900 - -
2 Sobic.001G080500 - -
3 Sobic.002G377400 cysteine-rich receptor-like protein kinase 16 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
4 Sobic.003G201800 coiled-coil domain-containing protein, putative, expressed -
5 Sobic.003G243750 - -
6 Sobic.002G382400 - -
7 Sobic.007G185000 leucine rich repeat protein, putative, expressed -
8 Sobic.001G062000 - -
9 Sobic.010G213100 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
10 Sobic.001G439050 - -
11 Sobic.006G001600 Leucine Rich Repeat family protein, expressed -
12 Sobic.003G115266 - -
13 Sobic.002G086900 receptor kinase, putative, expressed -
14 Sobic.007G182400 - -
15 Sobic.007G217350 - -
16 Sobic.001G479900 pentatricopeptide repeat protein PPR1106-17, putative, expressed -
17 Sobic.009G047033 - -
18 Sobic.001G082700 TKL_IRAK_CrRLK1L-1.1 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
19 Sobic.002G037700 expressed protein K10891: fanconi anemia group D2 protein
20 Sobic.003G246900 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic003G056900 Sobic003G056900 Sobic003G091900 Sobic003G091900 Sobic003G056900--Sobic003G091900 Sobic001G080500 Sobic001G080500 Sobic003G056900--Sobic001G080500 Sobic002G377400 Sobic002G377400 Sobic003G056900--Sobic002G377400 Sobic003G201800 Sobic003G201800 Sobic003G056900--Sobic003G201800 Sobic003G243750 Sobic003G243750 Sobic003G056900--Sobic003G243750 Sobic002G382400 Sobic002G382400 Sobic003G056900--Sobic002G382400 Sobic007G185000 Sobic007G185000 Sobic003G056900--Sobic007G185000 Sobic001G062000 Sobic001G062000 Sobic003G056900--Sobic001G062000 Sobic010G213100 Sobic010G213100 Sobic003G056900--Sobic010G213100 Sobic003G091900--Sobic010G213100 Sobic007G182400 Sobic007G182400 Sobic003G091900--Sobic007G182400 Sobic009G047033 Sobic009G047033 Sobic003G091900--Sobic009G047033 Sobic003G091900--Sobic001G062000 Sobic003G091900--Sobic003G056900 Sobic010G054400 Sobic010G054400 Sobic003G091900--Sobic010G054400 Sobic003G091900--Sobic002G377400 Sobic003G336600 Sobic003G336600 Sobic003G091900--Sobic003G336600 Sobic003G091900--Sobic007G185000 Sobic001G080500--Sobic003G056900 Sobic001G439050 Sobic001G439050 Sobic001G080500--Sobic001G439050 Sobic001G080500--Sobic002G382400 Sobic004G319500 Sobic004G319500 Sobic001G080500--Sobic004G319500 Sobic003G246900 Sobic003G246900 Sobic001G080500--Sobic003G246900 Sobic001G080500--Sobic003G201800 Sobic010G120350 Sobic010G120350 Sobic001G080500--Sobic010G120350 Sobic001G080500--Sobic007G185000 Sobic006G001600 Sobic006G001600 Sobic001G080500--Sobic006G001600 Sobic003G308900 Sobic003G308900 Sobic002G377400--Sobic003G308900 Sobic002G377400--Sobic007G185000 Sobic003G440500 Sobic003G440500 Sobic002G377400--Sobic003G440500 Sobic002G377400--Sobic003G243750 Sobic010G249600 Sobic010G249600 Sobic002G377400--Sobic010G249600 Sobic002G296800 Sobic002G296800 Sobic002G377400--Sobic002G296800 Sobic002G398600 Sobic002G398600 Sobic002G377400--Sobic002G398600 Sobic003G262500 Sobic003G262500 Sobic002G377400--Sobic003G262500 Sobic008G065700 Sobic008G065700 Sobic002G377400--Sobic008G065700 Sobic003G201800--Sobic002G382400 Sobic003G201800--Sobic010G120350 Sobic002G249400 Sobic002G249400 Sobic003G201800--Sobic002G249400 Sobic010G025200 Sobic010G025200 Sobic003G201800--Sobic010G025200 Sobic001G223000 Sobic001G223000 Sobic003G201800--Sobic001G223000 Sobic003G201800--Sobic004G319500 Sobic003G201800--Sobic006G001600 Sobic003G201800--Sobic003G056900 Sobic007G180800 Sobic007G180800 Sobic003G201800--Sobic007G180800 Sobic003G243750--Sobic007G185000 Sobic009G203600 Sobic009G203600 Sobic003G243750--Sobic009G203600 Sobic003G243750--Sobic002G377400 Sobic003G333150 Sobic003G333150 Sobic003G243750--Sobic003G333150 Sobic003G130650 Sobic003G130650 Sobic003G243750--Sobic003G130650 Sobic008G045300 Sobic008G045300 Sobic003G243750--Sobic008G045300 Sobic003G243750--Sobic003G308900 Sobic003G243750--Sobic010G025200 Sobic006G144900 Sobic006G144900 Sobic003G243750--Sobic006G144900 Sobic002G382400--Sobic003G201800 Sobic002G382400--Sobic001G439050 Sobic002G382400--Sobic010G120350 Sobic002G382400--Sobic004G319500 Sobic003G236501 Sobic003G236501 Sobic002G382400--Sobic003G236501 Sobic007G107900 Sobic007G107900 Sobic002G382400--Sobic007G107900 Sobic002G382400--Sobic003G056900 Sobic006G082100 Sobic006G082100 Sobic002G382400--Sobic006G082100 Sobic002G382400--Sobic006G001600 Sobic007G185000--Sobic002G377400 Sobic007G185000--Sobic003G308900 Sobic007G185000--Sobic003G243750 Sobic007G185000--Sobic003G440500 Sobic007G185000--Sobic009G203600 Sobic007G165100 Sobic007G165100 Sobic007G185000--Sobic007G165100 Sobic007G226000 Sobic007G226000 Sobic007G185000--Sobic007G226000 Sobic007G185000--Sobic009G047033 Sobic007G185000--Sobic010G249600 Sobic001G062000--Sobic007G182400 Sobic001G062000--Sobic010G054400 Sobic001G062000--Sobic003G091900 Sobic001G062000--Sobic010G213100 Sobic004G343733 Sobic004G343733 Sobic001G062000--Sobic004G343733 Sobic009G079700 Sobic009G079700 Sobic001G062000--Sobic009G079700 Sobic001G062000--Sobic002G377400 Sobic001G529301 Sobic001G529301 Sobic001G062000--Sobic001G529301 Sobic001G062000--Sobic003G056900 Sobic010G213100--Sobic003G091900 Sobic010G213100--Sobic010G054400 Sobic010G213100--Sobic001G062000 Sobic010G213100--Sobic007G182400 Sobic010G213100--Sobic003G308900 Sobic010G213100--Sobic003G336600 Sobic010G213100--Sobic009G047033 Sobic010G213100--Sobic002G377400 Sobic010G213100--Sobic004G343733
Octagon: transcription factors


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