Gene annotation
Transcriptome id Sobic.006G001600.1
Synonym Sb06g000330
Functional annotation Leucine Rich Repeat family protein, expressed
UniProt C5YB85
Pfam -
Panther DB PTHR23155 PTHR23155:SF442
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27190 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os04g02520.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G319500 heat shock protein DnaJ, putative, expressed -
2 Sobic.003G201800 coiled-coil domain-containing protein, putative, expressed -
3 Sobic.010G120350 - -
4 Sobic.003G056900 expressed protein -
5 Sobic.001G439050 - -
6 Sobic.002G382400 - -
7 Sobic.003G115266 - -
8 Sobic.002G011200 expressed protein -
9 Sobic.007G180800 - -
10 Sobic.001G223000 cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
11 Sobic.001G080500 - -
12 Sobic.003G186200 RWP-RK domain-containing protein, putative, expressed -
13 Sobic.003G091900 - -
14 Sobic.004G231100 expressed protein -
15 Sobic.002G249400 auxin efflux carrier component, putative, expressed -
16 Sobic.007G217350 - -
17 Sobic.010G025200 RNA recognition motif containing protein, putative, expressed -
18 Sobic.003G246900 MYB family transcription factor, putative, expressed -
19 Sobic.010G057250 - -
20 Sobic.001G479900 pentatricopeptide repeat protein PPR1106-17, putative, expressed -


Gene co-expression network
sample Sobic006G001600 Sobic006G001600 Sobic004G319500 Sobic004G319500 Sobic006G001600--Sobic004G319500 Sobic003G201800 Sobic003G201800 Sobic006G001600--Sobic003G201800 Sobic010G120350 Sobic010G120350 Sobic006G001600--Sobic010G120350 Sobic003G056900 Sobic003G056900 Sobic006G001600--Sobic003G056900 Sobic001G439050 Sobic001G439050 Sobic006G001600--Sobic001G439050 Sobic002G382400 Sobic002G382400 Sobic006G001600--Sobic002G382400 Sobic003G115266 Sobic003G115266 Sobic006G001600--Sobic003G115266 Sobic002G011200 Sobic002G011200 Sobic006G001600--Sobic002G011200 Sobic007G180800 Sobic007G180800 Sobic006G001600--Sobic007G180800 Sobic004G319500--Sobic010G120350 Sobic004G319500--Sobic001G439050 Sobic004G319500--Sobic002G382400 Sobic004G319500--Sobic006G001600 Sobic004G319500--Sobic003G201800 Sobic001G080500 Sobic001G080500 Sobic004G319500--Sobic001G080500 Sobic004G319500--Sobic003G056900 Sobic002G249400 Sobic002G249400 Sobic004G319500--Sobic002G249400 Sobic004G319500--Sobic007G180800 Sobic003G201800--Sobic002G382400 Sobic003G201800--Sobic010G120350 Sobic003G201800--Sobic002G249400 Sobic010G025200 Sobic010G025200 Sobic003G201800--Sobic010G025200 Sobic001G223000 Sobic001G223000 Sobic003G201800--Sobic001G223000 Sobic003G201800--Sobic004G319500 Sobic003G201800--Sobic006G001600 Sobic003G201800--Sobic003G056900 Sobic003G201800--Sobic007G180800 Sobic010G120350--Sobic004G319500 Sobic010G120350--Sobic003G201800 Sobic010G120350--Sobic002G382400 Sobic010G120350--Sobic002G249400 Sobic010G120350--Sobic006G001600 Sobic003G236501 Sobic003G236501 Sobic010G120350--Sobic003G236501 Sobic004G342700 Sobic004G342700 Sobic010G120350--Sobic004G342700 Sobic006G246800 Sobic006G246800 Sobic010G120350--Sobic006G246800 Sobic008G176401 Sobic008G176401 Sobic010G120350--Sobic008G176401 Sobic003G091900 Sobic003G091900 Sobic003G056900--Sobic003G091900 Sobic003G056900--Sobic001G080500 Sobic002G377400 Sobic002G377400 Sobic003G056900--Sobic002G377400 Sobic003G056900--Sobic003G201800 Sobic003G243750 Sobic003G243750 Sobic003G056900--Sobic003G243750 Sobic003G056900--Sobic002G382400 Sobic007G185000 Sobic007G185000 Sobic003G056900--Sobic007G185000 Sobic001G062000 Sobic001G062000 Sobic003G056900--Sobic001G062000 Sobic010G213100 Sobic010G213100 Sobic003G056900--Sobic010G213100 Sobic001G439050--Sobic002G382400 Sobic001G439050--Sobic004G319500 Sobic001G439050--Sobic003G056900 Sobic001G439050--Sobic006G001600 Sobic001G439050--Sobic001G080500 Sobic001G479900 Sobic001G479900 Sobic001G439050--Sobic001G479900 Sobic001G183550 Sobic001G183550 Sobic001G439050--Sobic001G183550 Sobic006G082100 Sobic006G082100 Sobic001G439050--Sobic006G082100 Sobic001G439050--Sobic010G120350 Sobic002G382400--Sobic003G201800 Sobic002G382400--Sobic001G439050 Sobic002G382400--Sobic010G120350 Sobic002G382400--Sobic004G319500 Sobic002G382400--Sobic003G236501 Sobic007G107900 Sobic007G107900 Sobic002G382400--Sobic007G107900 Sobic002G382400--Sobic003G056900 Sobic002G382400--Sobic006G082100 Sobic002G382400--Sobic006G001600 Sobic004G231100 Sobic004G231100 Sobic003G115266--Sobic004G231100 Sobic001G074601 Sobic001G074601 Sobic003G115266--Sobic001G074601 Sobic003G270650 Sobic003G270650 Sobic003G115266--Sobic003G270650 Sobic009G124850 Sobic009G124850 Sobic003G115266--Sobic009G124850 Sobic003G115266--Sobic001G479900 Sobic007G217350 Sobic007G217350 Sobic003G115266--Sobic007G217350 Sobic003G057000 Sobic003G057000 Sobic003G115266--Sobic003G057000 Sobic003G115266--Sobic003G056900 Sobic006G117800 Sobic006G117800 Sobic003G115266--Sobic006G117800 Sobic004G048201 Sobic004G048201 Sobic002G011200--Sobic004G048201 Sobic009G174833 Sobic009G174833 Sobic002G011200--Sobic009G174833 Sobic003G387400 Sobic003G387400 Sobic002G011200--Sobic003G387400 Sobic008G139200 Sobic008G139200 Sobic002G011200--Sobic008G139200 Sobic010G057250 Sobic010G057250 Sobic002G011200--Sobic010G057250 Sobic001G437600 Sobic001G437600 Sobic002G011200--Sobic001G437600 Sobic002G011200--Sobic010G025200 Sobic004G173900 Sobic004G173900 Sobic002G011200--Sobic004G173900 Sobic002G011200--Sobic003G243750 Sobic004G293600 Sobic004G293600 Sobic007G180800--Sobic004G293600 Sobic008G045300 Sobic008G045300 Sobic007G180800--Sobic008G045300 Sobic007G180800--Sobic010G057250 Sobic001G086100 Sobic001G086100 Sobic007G180800--Sobic001G086100 Sobic001G169000 Sobic001G169000 Sobic007G180800--Sobic001G169000 Sobic002G345100 Sobic002G345100 Sobic007G180800--Sobic002G345100 Sobic009G203600 Sobic009G203600 Sobic007G180800--Sobic009G203600 Sobic007G180800--Sobic010G025200 Sobic003G333150 Sobic003G333150 Sobic007G180800--Sobic003G333150
Octagon: transcription factors


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