Gene annotation
Transcriptome id Sobic.004G177500.1
Synonym Sb04g022740
Functional annotation expressed protein
UniProt C5XUT3
Pfam -
Panther DB PTHR35753 PTHR35753:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07020 : proline-rich family protein
RAP-DB (Rice) LOC_Os02g35090.1 : expressed protein
MaizeGDB (Corn) Zm00025a020673 , Zm00025a031606
Brachypodium KQJ99889
Barley HORVU1Hr1G070290.3 , HORVU1Hr1G070290.2 , HORVU1Hr1G070200.1
Wheat TraesCS1B02G308500 , TraesCS1A02G298800 , TraesCS1D02G292500
Populus -


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cDNA sequences
Sobic.004G177500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G320700 expressed protein -
2 Sobic.002G118400 - -
3 Sobic.007G174200 carrier, putative, expressed -
4 Sobic.001G061000 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.002G227100 cyclin-dependent kinase inhibitor, putative, expressed -
6 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
7 Sobic.002G280001 - -
8 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
9 Sobic.004G203600 Regulator of chromosome condensation domain containing protein, expressed -
10 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.004G305300 - -
12 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.002G266250 - -
14 Sobic.004G045200 phytosulfokine receptor precursor, putative, expressed -
15 Sobic.006G270300 Mlo family(PubMedID : 29491869)@MLO domain containing protein, putative, expressed K08472: mlo protein
16 Sobic.004G149000 - -
17 Sobic.002G314950 - -
18 Sobic.001G090200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed -
19 Sobic.003G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G361750 - -


Gene co-expression network
sample Sobic004G177500 Sobic004G177500 Sobic002G320700 Sobic002G320700 Sobic004G177500--Sobic002G320700 Sobic002G118400 Sobic002G118400 Sobic004G177500--Sobic002G118400 Sobic007G174200 Sobic007G174200 Sobic004G177500--Sobic007G174200 Sobic001G061000 Sobic001G061000 Sobic004G177500--Sobic001G061000 Sobic002G227100 Sobic002G227100 Sobic004G177500--Sobic002G227100 Sobic007G200300 Sobic007G200300 Sobic004G177500--Sobic007G200300 Sobic002G280001 Sobic002G280001 Sobic004G177500--Sobic002G280001 Sobic006G170800 Sobic006G170800 Sobic004G177500--Sobic006G170800 Sobic004G203600 Sobic004G203600 Sobic004G177500--Sobic004G203600 Sobic004G202750 Sobic004G202750 Sobic002G320700--Sobic004G202750 Sobic002G320700--Sobic006G170800 Sobic001G033200 Sobic001G033200 Sobic002G320700--Sobic001G033200 Sobic001G104100 Sobic001G104100 Sobic002G320700--Sobic001G104100 Sobic001G350300 Sobic001G350300 Sobic002G320700--Sobic001G350300 Sobic001G028500 Sobic001G028500 Sobic002G320700--Sobic001G028500 Sobic004G350600 Sobic004G350600 Sobic002G320700--Sobic004G350600 Sobic001G071700 Sobic001G071700 Sobic002G320700--Sobic001G071700 Sobic002G399000 Sobic002G399000 Sobic002G320700--Sobic002G399000 Sobic002G118400--Sobic001G061000 Sobic004G045200 Sobic004G045200 Sobic002G118400--Sobic004G045200 Sobic002G314950 Sobic002G314950 Sobic002G118400--Sobic002G314950 Sobic002G118400--Sobic001G033200 Sobic007G200200 Sobic007G200200 Sobic002G118400--Sobic007G200200 Sobic006G269300 Sobic006G269300 Sobic002G118400--Sobic006G269300 Sobic002G118400--Sobic002G320700 Sobic001G456650 Sobic001G456650 Sobic002G118400--Sobic001G456650 Sobic002G118400--Sobic004G203600 Sobic007G174200--Sobic002G227100 Sobic007G174200--Sobic001G350300 Sobic007G174200--Sobic006G170800 Sobic002G266250 Sobic002G266250 Sobic007G174200--Sobic002G266250 Sobic004G305300 Sobic004G305300 Sobic007G174200--Sobic004G305300 Sobic007G174200--Sobic002G320700 Sobic007G174200--Sobic004G350600 Sobic007G174200--Sobic002G118400 Sobic007G174200--Sobic001G033200 Sobic001G061000--Sobic002G118400 Sobic001G061000--Sobic004G045200 Sobic001G061000--Sobic007G200200 Sobic001G061000--Sobic001G456650 Sobic001G061000--Sobic001G033200 Sobic001G061000--Sobic002G314950 Sobic001G361750 Sobic001G361750 Sobic001G061000--Sobic001G361750 Sobic001G061000--Sobic002G320700 Sobic001G068901 Sobic001G068901 Sobic001G061000--Sobic001G068901 Sobic002G227100--Sobic002G280001 Sobic002G227100--Sobic007G174200 Sobic006G270300 Sobic006G270300 Sobic002G227100--Sobic006G270300 Sobic002G227100--Sobic007G200300 Sobic004G149000 Sobic004G149000 Sobic002G227100--Sobic004G149000 Sobic002G227100--Sobic002G266250 Sobic002G227100--Sobic006G170800 Sobic003G079600 Sobic003G079600 Sobic002G227100--Sobic003G079600 Sobic002G227100--Sobic004G305300 Sobic007G200300--Sobic004G149000 Sobic007G200300--Sobic002G280001 Sobic007G200300--Sobic006G270300 Sobic007G200300--Sobic002G227100 Sobic007G200300--Sobic002G320700 Sobic004G081000 Sobic004G081000 Sobic007G200300--Sobic004G081000 Sobic009G199900 Sobic009G199900 Sobic007G200300--Sobic009G199900 Sobic006G111400 Sobic006G111400 Sobic007G200300--Sobic006G111400 Sobic007G200300--Sobic004G203600 Sobic002G280001--Sobic002G227100 Sobic002G280001--Sobic007G200300 Sobic002G280001--Sobic006G270300 Sobic002G280001--Sobic004G149000 Sobic002G280001--Sobic004G081000 Sobic002G280001--Sobic004G203600 Sobic002G280001--Sobic002G266250 Sobic006G024400 Sobic006G024400 Sobic002G280001--Sobic006G024400 Sobic002G280001--Sobic003G079600 Sobic006G170800--Sobic001G350300 Sobic006G170800--Sobic002G320700 Sobic006G170800--Sobic004G305300 Sobic006G170800--Sobic002G399000 Sobic010G242000 Sobic010G242000 Sobic006G170800--Sobic010G242000 Sobic006G170800--Sobic004G350600 Sobic006G170800--Sobic004G202750 Sobic006G170800--Sobic001G104100 Sobic005G025400 Sobic005G025400 Sobic006G170800--Sobic005G025400 Sobic004G203600--Sobic006G270300 Sobic004G203600--Sobic001G033200 Sobic004G203600--Sobic002G320700 Sobic002G123700 Sobic002G123700 Sobic004G203600--Sobic002G123700 Sobic004G203600--Sobic002G314950 Sobic003G150700 Sobic003G150700 Sobic004G203600--Sobic003G150700 Sobic006G121200 Sobic006G121200 Sobic004G203600--Sobic006G121200 Sobic004G203600--Sobic001G104100 Sobic004G203600--Sobic007G200300
Octagon: transcription factors


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