Gene annotation
Transcriptome id Sobic.003G249400.1
Synonym Sb03g030570
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XFZ7
Pfam -
Panther DB PTHR36742
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42975 : -
RAP-DB (Rice) LOC_Os01g47630.1 : expressed protein
MaizeGDB (Corn) Zm00025a028131
Brachypodium PNT72545
Barley HORVU3Hr1G060730.3 , HORVU3Hr1G060730.2 , HORVU3Hr1G060730.5 , HORVU3Hr1G060730.4
Wheat TraesCS3A02G243200 , TraesCS3A02G243200 , TraesCS3B02G271300 , TraesCS3D02G243200 , TraesCS3D02G243200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G177500 expressed protein -
2 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
3 Sobic.002G373200 strictosidine synthase, putative, expressed -
4 Sobic.002G314950 - -
5 Sobic.001G527900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
6 Sobic.009G143900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@powdery mildew resistant protein 5, putative, expressed -
7 Sobic.003G082401 - -
8 Sobic.010G278300 OsPOP15 - Putative Prolyl Oligopeptidase homologue, expressed K01354: oligopeptidase B
9 Sobic.004G012100 basic helix-loop-helix DND-binding domain containing protein, expressed -
10 Sobic.001G033200 GRAS family transcription factor domain containing protein, expressed -
11 Sobic.005G155001 - -
12 Sobic.001G361750 - -
13 Sobic.009G004500 expressed protein -
14 Sobic.006G232300 cytochrome P450 72A1, putative, expressed -
15 Sobic.009G202900 Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
16 Sobic.006G093400 potassium channel SKOR, putative, expressed -
17 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
18 Sobic.009G041400 rp1, putative, expressed -
19 Sobic.007G090406 - -
20 Sobic.001G060200 - -


Gene co-expression network
sample Sobic003G249400 Sobic003G249400 Sobic004G177500 Sobic004G177500 Sobic003G249400--Sobic004G177500 Sobic001G483200 Sobic001G483200 Sobic003G249400--Sobic001G483200 Sobic002G373200 Sobic002G373200 Sobic003G249400--Sobic002G373200 Sobic002G314950 Sobic002G314950 Sobic003G249400--Sobic002G314950 Sobic001G527900 Sobic001G527900 Sobic003G249400--Sobic001G527900 Sobic009G143900 Sobic009G143900 Sobic003G249400--Sobic009G143900 Sobic003G082401 Sobic003G082401 Sobic003G249400--Sobic003G082401 Sobic010G278300 Sobic010G278300 Sobic003G249400--Sobic010G278300 Sobic004G012100 Sobic004G012100 Sobic003G249400--Sobic004G012100 Sobic002G320700 Sobic002G320700 Sobic004G177500--Sobic002G320700 Sobic002G118400 Sobic002G118400 Sobic004G177500--Sobic002G118400 Sobic007G174200 Sobic007G174200 Sobic004G177500--Sobic007G174200 Sobic001G061000 Sobic001G061000 Sobic004G177500--Sobic001G061000 Sobic002G227100 Sobic002G227100 Sobic004G177500--Sobic002G227100 Sobic007G200300 Sobic007G200300 Sobic004G177500--Sobic007G200300 Sobic002G280001 Sobic002G280001 Sobic004G177500--Sobic002G280001 Sobic006G170800 Sobic006G170800 Sobic004G177500--Sobic006G170800 Sobic004G203600 Sobic004G203600 Sobic004G177500--Sobic004G203600 Sobic007G017300 Sobic007G017300 Sobic001G483200--Sobic007G017300 Sobic005G155001 Sobic005G155001 Sobic001G483200--Sobic005G155001 Sobic009G004500 Sobic009G004500 Sobic001G483200--Sobic009G004500 Sobic001G368000 Sobic001G368000 Sobic001G483200--Sobic001G368000 Sobic007G061500 Sobic007G061500 Sobic001G483200--Sobic007G061500 Sobic007G213500 Sobic007G213500 Sobic001G483200--Sobic007G213500 Sobic001G483200--Sobic001G527900 Sobic001G028500 Sobic001G028500 Sobic001G483200--Sobic001G028500 Sobic001G468200 Sobic001G468200 Sobic001G483200--Sobic001G468200 Sobic010G132300 Sobic010G132300 Sobic002G373200--Sobic010G132300 Sobic010G155901 Sobic010G155901 Sobic002G373200--Sobic010G155901 Sobic003G400332 Sobic003G400332 Sobic002G373200--Sobic003G400332 Sobic007G174100 Sobic007G174100 Sobic002G373200--Sobic007G174100 Sobic005G076100 Sobic005G076100 Sobic002G373200--Sobic005G076100 Sobic009G082400 Sobic009G082400 Sobic002G373200--Sobic009G082400 Sobic009G202900 Sobic009G202900 Sobic002G373200--Sobic009G202900 Sobic006G058300 Sobic006G058300 Sobic002G373200--Sobic006G058300 Sobic003G149900 Sobic003G149900 Sobic002G373200--Sobic003G149900 Sobic002G314950--Sobic001G527900 Sobic006G232300 Sobic006G232300 Sobic002G314950--Sobic006G232300 Sobic002G314950--Sobic005G155001 Sobic010G253700 Sobic010G253700 Sobic002G314950--Sobic010G253700 Sobic002G314950--Sobic001G483200 Sobic006G093400 Sobic006G093400 Sobic002G314950--Sobic006G093400 Sobic009G114900 Sobic009G114900 Sobic002G314950--Sobic009G114900 Sobic009G004300 Sobic009G004300 Sobic002G314950--Sobic009G004300 Sobic007G200200 Sobic007G200200 Sobic002G314950--Sobic007G200200 Sobic001G527900--Sobic005G155001 Sobic001G527900--Sobic001G483200 Sobic001G527900--Sobic009G114900 Sobic001G527900--Sobic002G314950 Sobic001G527900--Sobic009G004500 Sobic010G021401 Sobic010G021401 Sobic001G527900--Sobic010G021401 Sobic001G060200 Sobic001G060200 Sobic001G527900--Sobic001G060200 Sobic001G527900--Sobic007G017300 Sobic007G090406 Sobic007G090406 Sobic001G527900--Sobic007G090406 Sobic009G143900--Sobic001G061000 Sobic009G143900--Sobic004G177500 Sobic001G456650 Sobic001G456650 Sobic009G143900--Sobic001G456650 Sobic009G143900--Sobic002G118400 Sobic009G106300 Sobic009G106300 Sobic009G143900--Sobic009G106300 Sobic009G143900--Sobic007G200200 Sobic009G143900--Sobic003G249400 Sobic003G406240 Sobic003G406240 Sobic009G143900--Sobic003G406240 Sobic001G361750 Sobic001G361750 Sobic009G143900--Sobic001G361750 Sobic010G150600 Sobic010G150600 Sobic003G082401--Sobic010G150600 Sobic009G184500 Sobic009G184500 Sobic003G082401--Sobic009G184500 Sobic001G243300 Sobic001G243300 Sobic003G082401--Sobic001G243300 Sobic009G144050 Sobic009G144050 Sobic003G082401--Sobic009G144050 Sobic003G313700 Sobic003G313700 Sobic003G082401--Sobic003G313700 Sobic001G490600 Sobic001G490600 Sobic003G082401--Sobic001G490600 Sobic001G212701 Sobic001G212701 Sobic003G082401--Sobic001G212701 Sobic008G096150 Sobic008G096150 Sobic003G082401--Sobic008G096150 Sobic003G082401--Sobic005G155001 Sobic010G278300--Sobic006G093400 Sobic010G257300 Sobic010G257300 Sobic010G278300--Sobic010G257300 Sobic010G278300--Sobic010G253700 Sobic008G096900 Sobic008G096900 Sobic010G278300--Sobic008G096900 Sobic010G278300--Sobic004G012100 Sobic009G072400 Sobic009G072400 Sobic010G278300--Sobic009G072400 Sobic010G278300--Sobic002G314950 Sobic010G278300--Sobic009G114900 Sobic006G229600 Sobic006G229600 Sobic010G278300--Sobic006G229600 Sobic004G012100--Sobic010G253700 Sobic004G012100--Sobic010G257300 Sobic010G242100 Sobic010G242100 Sobic004G012100--Sobic010G242100 Sobic001G068901 Sobic001G068901 Sobic004G012100--Sobic001G068901 Sobic001G537600 Sobic001G537600 Sobic004G012100--Sobic001G537600 Sobic009G258150 Sobic009G258150 Sobic004G012100--Sobic009G258150 Sobic003G379500 Sobic003G379500 Sobic004G012100--Sobic003G379500 Sobic004G012100--Sobic006G229600 Sobic004G012100--Sobic006G093400
Octagon: transcription factors


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