Gene annotation
Transcriptome id Sobic.004G228000.2
Synonym SDE5
Functional annotation DUF1771 domain containing protein, putative, expressed
UniProt A0A1Z5RNU6
Pfam PF08590
Panther DB PTHR13308 PTHR13308:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15390 : silencing defective 5
RAP-DB (Rice) LOC_Os02g42670.1 : DUF1771 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a032115
Brachypodium PNT69122
Barley HORVU2Hr1G098380.10 , HORVU2Hr1G098380.11 , HORVU2Hr1G098380.12 , HORVU2Hr1G098380.13 , HORVU2Hr1G098380.14 , HORVU2Hr1G098380.15 , HORVU2Hr1G098380.2 , HORVU2Hr1G098380.3 , HORVU2Hr1G098380.1 , HORVU2Hr1G098380.6 , HORVU2Hr1G098380.7 , HORVU2Hr1G098380.4 , HORVU2Hr1G098380.5 , HORVU2Hr1G098380.8 , HORVU2Hr1G098380.9
Wheat TraesCS2D02G415100 , TraesCS2A02G417900 , TraesCS2A02G417900 , TraesCS2A02G417900 , TraesCS2B02G436800
Populus -


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cDNA sequences
Sobic.004G228000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G151900 expressed protein -
2 Sobic.004G202750 - -
3 Sobic.010G278400 coiled-coil domain-containing protein 12, putative, expressed K12871: coiled-coil domain-containing protein 12
4 Sobic.003G251900 expressed protein -
5 Sobic.010G118401 - -
6 Sobic.009G122201 - -
7 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
8 Sobic.006G169600 expressed protein -
9 Sobic.006G111400 nodulation receptor kinase precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
10 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
11 Sobic.004G350600 AMP-binding domain containing protein, expressed -
12 Sobic.002G320700 expressed protein -
13 Sobic.007G200300 lectin protein kinase family protein, putative, expressed -
14 Sobic.001G028500 expressed protein -
15 Sobic.003G259000 - -
16 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
17 Sobic.001G350800 - -
18 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
19 Sobic.004G149000 - -
20 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -


Gene co-expression network
sample Sobic004G228000 Sobic004G228000 Sobic008G151900 Sobic008G151900 Sobic004G228000--Sobic008G151900 Sobic004G202750 Sobic004G202750 Sobic004G228000--Sobic004G202750 Sobic010G278400 Sobic010G278400 Sobic004G228000--Sobic010G278400 Sobic003G251900 Sobic003G251900 Sobic004G228000--Sobic003G251900 Sobic010G118401 Sobic010G118401 Sobic004G228000--Sobic010G118401 Sobic009G122201 Sobic009G122201 Sobic004G228000--Sobic009G122201 Sobic006G170800 Sobic006G170800 Sobic004G228000--Sobic006G170800 Sobic006G169600 Sobic006G169600 Sobic004G228000--Sobic006G169600 Sobic006G111400 Sobic006G111400 Sobic004G228000--Sobic006G111400 Sobic008G151900--Sobic009G122201 Sobic002G035100 Sobic002G035100 Sobic008G151900--Sobic002G035100 Sobic008G151900--Sobic004G228000 Sobic001G140101 Sobic001G140101 Sobic008G151900--Sobic001G140101 Sobic001G027400 Sobic001G027400 Sobic008G151900--Sobic001G027400 Sobic004G267950 Sobic004G267950 Sobic008G151900--Sobic004G267950 Sobic008G151900--Sobic010G118401 Sobic008G151900--Sobic004G202750 Sobic002G387000 Sobic002G387000 Sobic008G151900--Sobic002G387000 Sobic001G028500 Sobic001G028500 Sobic004G202750--Sobic001G028500 Sobic001G350800 Sobic001G350800 Sobic004G202750--Sobic001G350800 Sobic002G320700 Sobic002G320700 Sobic004G202750--Sobic002G320700 Sobic009G004500 Sobic009G004500 Sobic004G202750--Sobic009G004500 Sobic004G231501 Sobic004G231501 Sobic004G202750--Sobic004G231501 Sobic001G071700 Sobic001G071700 Sobic004G202750--Sobic001G071700 Sobic007G061500 Sobic007G061500 Sobic004G202750--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic004G202750--Sobic001G104100 Sobic001G483200 Sobic001G483200 Sobic004G202750--Sobic001G483200 Sobic006G260101 Sobic006G260101 Sobic010G278400--Sobic006G260101 Sobic007G114650 Sobic007G114650 Sobic010G278400--Sobic007G114650 Sobic001G087500 Sobic001G087500 Sobic010G278400--Sobic001G087500 Sobic010G278400--Sobic004G202750 Sobic005G145700 Sobic005G145700 Sobic010G278400--Sobic005G145700 Sobic010G278400--Sobic006G170800 Sobic009G181900 Sobic009G181900 Sobic010G278400--Sobic009G181900 Sobic010G278400--Sobic010G118401 Sobic009G187900 Sobic009G187900 Sobic010G278400--Sobic009G187900 Sobic009G252600 Sobic009G252600 Sobic003G251900--Sobic009G252600 Sobic004G181000 Sobic004G181000 Sobic003G251900--Sobic004G181000 Sobic003G155800 Sobic003G155800 Sobic003G251900--Sobic003G155800 Sobic005G014400 Sobic005G014400 Sobic003G251900--Sobic005G014400 Sobic010G201444 Sobic010G201444 Sobic003G251900--Sobic010G201444 Sobic001G093732 Sobic001G093732 Sobic003G251900--Sobic001G093732 Sobic002G206900 Sobic002G206900 Sobic003G251900--Sobic002G206900 Sobic009G199900 Sobic009G199900 Sobic003G251900--Sobic009G199900 Sobic003G362800 Sobic003G362800 Sobic003G251900--Sobic003G362800 Sobic009G112500 Sobic009G112500 Sobic010G118401--Sobic009G112500 Sobic010G118401--Sobic002G387000 Sobic010G118401--Sobic004G202750 Sobic010G118401--Sobic010G278400 Sobic010G242000 Sobic010G242000 Sobic010G118401--Sobic010G242000 Sobic010G118401--Sobic007G114650 Sobic010G118401--Sobic004G228000 Sobic010G118401--Sobic001G087500 Sobic002G399000 Sobic002G399000 Sobic010G118401--Sobic002G399000 Sobic010G041500 Sobic010G041500 Sobic009G122201--Sobic010G041500 Sobic009G184500 Sobic009G184500 Sobic009G122201--Sobic009G184500 Sobic009G122201--Sobic008G151900 Sobic004G288900 Sobic004G288900 Sobic009G122201--Sobic004G288900 Sobic004G224100 Sobic004G224100 Sobic009G122201--Sobic004G224100 Sobic004G047001 Sobic004G047001 Sobic009G122201--Sobic004G047001 Sobic009G122201--Sobic004G202750 Sobic002G138200 Sobic002G138200 Sobic009G122201--Sobic002G138200 Sobic001G490600 Sobic001G490600 Sobic009G122201--Sobic001G490600 Sobic001G350300 Sobic001G350300 Sobic006G170800--Sobic001G350300 Sobic006G170800--Sobic002G320700 Sobic004G305300 Sobic004G305300 Sobic006G170800--Sobic004G305300 Sobic006G170800--Sobic002G399000 Sobic006G170800--Sobic010G242000 Sobic004G350600 Sobic004G350600 Sobic006G170800--Sobic004G350600 Sobic006G170800--Sobic004G202750 Sobic006G170800--Sobic001G104100 Sobic005G025400 Sobic005G025400 Sobic006G170800--Sobic005G025400 Sobic005G063600 Sobic005G063600 Sobic006G169600--Sobic005G063600 Sobic009G160100 Sobic009G160100 Sobic006G169600--Sobic009G160100 Sobic006G169600--Sobic006G111400 Sobic006G169600--Sobic003G155800 Sobic006G169600--Sobic004G350600 Sobic006G169600--Sobic009G199900 Sobic006G169600--Sobic004G181000 Sobic002G234800 Sobic002G234800 Sobic006G169600--Sobic002G234800 Sobic003G150700 Sobic003G150700 Sobic006G169600--Sobic003G150700 Sobic008G007100 Sobic008G007100 Sobic006G111400--Sobic008G007100 Sobic006G111400--Sobic002G234800 Sobic006G111400--Sobic006G169600 Sobic006G111400--Sobic009G199900 Sobic006G111400--Sobic003G251900 Sobic007G200300 Sobic007G200300 Sobic006G111400--Sobic007G200300 Sobic003G234300 Sobic003G234300 Sobic006G111400--Sobic003G234300 Sobic006G111400--Sobic004G350600 Sobic004G149000 Sobic004G149000 Sobic006G111400--Sobic004G149000
Octagon: transcription factors


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