Gene annotation
Transcriptome id Sobic.005G063600.6,Sobic.005G063600.1,Sobic.005G063600.5,Sobic.005G063600.4,Sobic.005G063600.2
Synonym
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6PQH3 , A0A1Z5RI46 , A0A1B6PQJ0
Pfam PF00069 PF03018 PF03018
Panther DB PTHR27002 PTHR27002:SF111 PTHR21495 PTHR21495:SF76
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04733; interleukin-1 receptor-associated kinase 4
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G21100 : S-locus lectin protein kinase family protein,Disease resistance-responsive (dirigent-like protein) family protein
RAP-DB (Rice) LOC_Os11g11890.1,LOC_Os10g18760.1 : protein kinase domain containing protein, expressed,dirigent, putative, expressed
MaizeGDB (Corn) Zm00025a033512
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G063600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
2 Sobic.004G231501 - -
3 Sobic.001G028500 expressed protein -
4 Sobic.006G169600 expressed protein -
5 Sobic.003G106100 expressed protein -
6 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
7 Sobic.001G060200 - -
8 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
9 Sobic.004G314100 GS9(Ortholog in rice:Zhao et al.(2018))(PubMedID : 31659890)@expressed protein -
10 Sobic.004G350600 AMP-binding domain containing protein, expressed -
11 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
12 Sobic.009G160100 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
13 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G202750 - -
15 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
16 Sobic.005G096201 - -
17 Sobic.003G251900 expressed protein -
18 Sobic.001G140101 - -
19 Sobic.006G008500 - -
20 Sobic.003G365200 expressed protein -


Gene co-expression network
sample Sobic005G063600 Sobic005G063600 Sobic003G155800 Sobic003G155800 Sobic005G063600--Sobic003G155800 Sobic004G231501 Sobic004G231501 Sobic005G063600--Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic005G063600--Sobic001G028500 Sobic006G169600 Sobic006G169600 Sobic005G063600--Sobic006G169600 Sobic003G106100 Sobic003G106100 Sobic005G063600--Sobic003G106100 Sobic009G199900 Sobic009G199900 Sobic005G063600--Sobic009G199900 Sobic001G060200 Sobic001G060200 Sobic005G063600--Sobic001G060200 Sobic007G061500 Sobic007G061500 Sobic005G063600--Sobic007G061500 Sobic004G314100 Sobic004G314100 Sobic005G063600--Sobic004G314100 Sobic003G362800 Sobic003G362800 Sobic003G155800--Sobic003G362800 Sobic004G181000 Sobic004G181000 Sobic003G155800--Sobic004G181000 Sobic003G253700 Sobic003G253700 Sobic003G155800--Sobic003G253700 Sobic003G155800--Sobic005G063600 Sobic009G223900 Sobic009G223900 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic002G001500 Sobic002G001500 Sobic003G155800--Sobic002G001500 Sobic001G520000 Sobic001G520000 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900 Sobic004G231501--Sobic001G028500 Sobic004G231501--Sobic007G061500 Sobic004G231501--Sobic004G314100 Sobic004G231501--Sobic003G106100 Sobic009G004500 Sobic009G004500 Sobic004G231501--Sobic009G004500 Sobic007G017300 Sobic007G017300 Sobic004G231501--Sobic007G017300 Sobic004G202750 Sobic004G202750 Sobic004G231501--Sobic004G202750 Sobic001G483200 Sobic001G483200 Sobic004G231501--Sobic001G483200 Sobic001G368000 Sobic001G368000 Sobic004G231501--Sobic001G368000 Sobic001G028500--Sobic004G231501 Sobic001G028500--Sobic007G061500 Sobic001G028500--Sobic009G004500 Sobic001G028500--Sobic003G106100 Sobic001G028500--Sobic004G202750 Sobic001G028500--Sobic004G314100 Sobic001G028500--Sobic007G017300 Sobic001G028500--Sobic001G483200 Sobic001G028500--Sobic001G060200 Sobic006G169600--Sobic005G063600 Sobic009G160100 Sobic009G160100 Sobic006G169600--Sobic009G160100 Sobic006G111400 Sobic006G111400 Sobic006G169600--Sobic006G111400 Sobic006G169600--Sobic003G155800 Sobic004G350600 Sobic004G350600 Sobic006G169600--Sobic004G350600 Sobic006G169600--Sobic009G199900 Sobic006G169600--Sobic004G181000 Sobic002G234800 Sobic002G234800 Sobic006G169600--Sobic002G234800 Sobic003G150700 Sobic003G150700 Sobic006G169600--Sobic003G150700 Sobic003G106100--Sobic004G314100 Sobic003G106100--Sobic001G028500 Sobic003G106100--Sobic004G231501 Sobic003G106100--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic003G106100--Sobic001G104100 Sobic007G213500 Sobic007G213500 Sobic003G106100--Sobic007G213500 Sobic003G106100--Sobic009G199900 Sobic003G106100--Sobic001G060200 Sobic004G026000 Sobic004G026000 Sobic003G106100--Sobic004G026000 Sobic009G199900--Sobic001G104100 Sobic009G199900--Sobic001G028500 Sobic009G199900--Sobic003G106100 Sobic009G199900--Sobic004G202750 Sobic009G199900--Sobic004G350600 Sobic009G199900--Sobic004G231501 Sobic009G199900--Sobic004G026000 Sobic009G199900--Sobic003G155800 Sobic009G199900--Sobic004G314100 Sobic001G060200--Sobic009G004500 Sobic001G060200--Sobic001G028500 Sobic003G093500 Sobic003G093500 Sobic001G060200--Sobic003G093500 Sobic001G060200--Sobic007G061500 Sobic005G155001 Sobic005G155001 Sobic001G060200--Sobic005G155001 Sobic001G060200--Sobic003G106100 Sobic001G527900 Sobic001G527900 Sobic001G060200--Sobic001G527900 Sobic001G060200--Sobic007G017300 Sobic004G224100 Sobic004G224100 Sobic001G060200--Sobic004G224100 Sobic007G061500--Sobic004G231501 Sobic007G061500--Sobic001G028500 Sobic007G061500--Sobic004G314100 Sobic007G061500--Sobic009G004500 Sobic007G061500--Sobic007G017300 Sobic007G061500--Sobic001G368000 Sobic007G061500--Sobic003G093500 Sobic007G061500--Sobic003G106100 Sobic007G061500--Sobic001G483200 Sobic004G314100--Sobic007G061500 Sobic004G314100--Sobic003G106100 Sobic004G314100--Sobic004G231501 Sobic004G314100--Sobic001G028500 Sobic004G314100--Sobic004G026000 Sobic004G314100--Sobic007G213500 Sobic004G310400 Sobic004G310400 Sobic004G314100--Sobic004G310400 Sobic004G314100--Sobic001G104100 Sobic004G314100--Sobic007G017300
Octagon: transcription factors


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