Gene annotation
Transcriptome id Sobic.009G160100.2,Sobic.009G160100.4,Sobic.009G160100.3,Sobic.009G160100.1
Synonym ATP5CS, Sb09g022290, P5CS1
Functional annotation "Expressed in drought, salt and oxidative stress" (PubMedID : 29862293)
amino acid kinase, putative, expressed
UniProt C8CB72 , C6JSP3 , A0A1Z5R2Y5 , A0A1B6P8T3
Pfam PF00171 PF00696
Panther DB PTHR11063 PTHR11063:SF13
NCBI CDD -
KEGG Orthology K12657; ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G55610 : delta 1-pyrroline-5-carboxylate synthase 2
RAP-DB (Rice) LOC_Os05g38150.1 : amino acid kinase, putative, expressed
MaizeGDB (Corn) Zm00025a043884 , Zm00025a037186
Brachypodium PNT71125 , PNT71124 , PNT71126 , KQK10568
Barley HORVU3Hr1G085760.16 , HORVU3Hr1G085760.15 , HORVU3Hr1G085760.8 , HORVU3Hr1G085760.3 , HORVU3Hr1G085760.2 , HORVU3Hr1G085760.7 , HORVU3Hr1G085760.6 , HORVU3Hr1G085760.5 , HORVU3Hr1G085760.4 , HORVU3Hr1G085760.13 , HORVU3Hr1G085760.12 , HORVU3Hr1G085760.11 , HORVU3Hr1G085760.10 , HORVU3Hr1G085760.1 , HORVU3Hr1G085760.14 , HORVU1Hr1G072780.1 , HORVU1Hr1G072780.3 , HORVU1Hr1G072780.5 , HORVU1Hr1G072780.4 , HORVU1Hr1G072780.7 , HORVU1Hr1G072780.6
Wheat TraesCS1B02G290600 , TraesCS1D02G280700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G362800 - -
2 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
3 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
4 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
5 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G113400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@seed maturation protein PM41, putative, expressed -
7 Sobic.006G169600 expressed protein -
8 Sobic.010G000200 expressed protein -
9 Sobic.003G025300 lectin protein kinase family protein, putative, expressed -
10 Sobic.002G206900 GEX2, putative, expressed -
11 Sobic.003G040300 cytochrome P450, putative, expressed -
12 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
13 Sobic.007G077466 - -
14 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
15 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
16 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
17 Sobic.003G150700 pectinacetylesterase domain containing protein, expressed -
18 Sobic.009G223900 protein binding protein, putative, expressed -
19 Sobic.007G010400 - -
20 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -


Gene co-expression network
sample Sobic009G160100 Sobic009G160100 Sobic003G362800 Sobic003G362800 Sobic009G160100--Sobic003G362800 Sobic002G001500 Sobic002G001500 Sobic009G160100--Sobic002G001500 Sobic003G155800 Sobic003G155800 Sobic009G160100--Sobic003G155800 Sobic009G208000 Sobic009G208000 Sobic009G160100--Sobic009G208000 Sobic004G181000 Sobic004G181000 Sobic009G160100--Sobic004G181000 Sobic001G113400 Sobic001G113400 Sobic009G160100--Sobic001G113400 Sobic006G169600 Sobic006G169600 Sobic009G160100--Sobic006G169600 Sobic010G000200 Sobic010G000200 Sobic009G160100--Sobic010G000200 Sobic003G025300 Sobic003G025300 Sobic009G160100--Sobic003G025300 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic008G103400 Sobic008G103400 Sobic003G362800--Sobic008G103400 Sobic003G362800--Sobic010G000200 Sobic004G173200 Sobic004G173200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic009G223900 Sobic009G223900 Sobic002G001500--Sobic009G223900 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G085600 Sobic002G085600 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic002G001500--Sobic004G173200 Sobic003G155800--Sobic003G362800 Sobic003G155800--Sobic004G181000 Sobic003G253700 Sobic003G253700 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic003G155800--Sobic009G223900 Sobic009G252600 Sobic009G252600 Sobic003G155800--Sobic009G252600 Sobic003G155800--Sobic002G001500 Sobic001G520000 Sobic001G520000 Sobic003G155800--Sobic001G520000 Sobic002G206900 Sobic002G206900 Sobic003G155800--Sobic002G206900 Sobic009G208000--Sobic002G001500 Sobic003G040300 Sobic003G040300 Sobic009G208000--Sobic003G040300 Sobic009G208000--Sobic004G181000 Sobic009G208000--Sobic003G362800 Sobic009G208000--Sobic001G113400 Sobic009G208000--Sobic009G160100 Sobic009G208000--Sobic003G155800 Sobic003G150700 Sobic003G150700 Sobic009G208000--Sobic003G150700 Sobic009G208000--Sobic008G103400 Sobic004G181000--Sobic002G001500 Sobic004G181000--Sobic008G103400 Sobic004G181000--Sobic003G362800 Sobic004G181000--Sobic009G223900 Sobic004G181000--Sobic003G155800 Sobic004G181000--Sobic009G208000 Sobic003G251900 Sobic003G251900 Sobic004G181000--Sobic003G251900 Sobic002G234800 Sobic002G234800 Sobic004G181000--Sobic002G234800 Sobic004G181000--Sobic001G113400 Sobic001G113400--Sobic003G362800 Sobic001G113400--Sobic002G001500 Sobic001G113400--Sobic002G085600 Sobic001G113400--Sobic009G208000 Sobic001G113400--Sobic004G144300 Sobic001G113400--Sobic003G155800 Sobic001G113400--Sobic009G223900 Sobic001G113400--Sobic004G181000 Sobic009G192933 Sobic009G192933 Sobic001G113400--Sobic009G192933 Sobic006G169600--Sobic005G063600 Sobic006G169600--Sobic009G160100 Sobic006G111400 Sobic006G111400 Sobic006G169600--Sobic006G111400 Sobic006G169600--Sobic003G155800 Sobic004G350600 Sobic004G350600 Sobic006G169600--Sobic004G350600 Sobic009G199900 Sobic009G199900 Sobic006G169600--Sobic009G199900 Sobic006G169600--Sobic004G181000 Sobic006G169600--Sobic002G234800 Sobic006G169600--Sobic003G150700 Sobic010G000200--Sobic004G173200 Sobic010G012200 Sobic010G012200 Sobic010G000200--Sobic010G012200 Sobic010G000200--Sobic003G362800 Sobic001G212900 Sobic001G212900 Sobic010G000200--Sobic001G212900 Sobic003G155000 Sobic003G155000 Sobic010G000200--Sobic003G155000 Sobic003G262600 Sobic003G262600 Sobic010G000200--Sobic003G262600 Sobic001G370800 Sobic001G370800 Sobic010G000200--Sobic001G370800 Sobic002G187900 Sobic002G187900 Sobic010G000200--Sobic002G187900 Sobic003G225200 Sobic003G225200 Sobic010G000200--Sobic003G225200 Sobic007G010400 Sobic007G010400 Sobic003G025300--Sobic007G010400 Sobic003G025300--Sobic003G040300 Sobic003G025300--Sobic009G160100 Sobic003G025300--Sobic009G208000 Sobic003G025300--Sobic002G001500 Sobic003G361800 Sobic003G361800 Sobic003G025300--Sobic003G361800 Sobic003G025300--Sobic008G103400 Sobic005G048800 Sobic005G048800 Sobic003G025300--Sobic005G048800 Sobic003G025300--Sobic010G000200
Octagon: transcription factors


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