Gene annotation
Transcriptome id Sobic.003G025300.1
Synonym SD2-5, Sb03g002430
Functional annotation lectin protein kinase family protein, putative, expressed
UniProt C5XL73
Pfam PF08276 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF20
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G32300 : S-domain-2 5
RAP-DB (Rice) LOC_Os04g23760.1 : lectin protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a035871
Brachypodium KQJ92146 , KQK02399 , KQK02402
Barley HORVU5Hr1G119720.3 , HORVU5Hr1G119720.2 , HORVU5Hr1G119720.1 , HORVU5Hr1G119720.7 , HORVU5Hr1G119720.6 , HORVU5Hr1G119720.5 , HORVU5Hr1G119720.4 , HORVU5Hr1G119720.9 , HORVU5Hr1G119720.8 , HORVU1Hr1G005720.5 , HORVU1Hr1G005720.4 , HORVU1Hr1G005720.7 , HORVU1Hr1G005720.6
Wheat TraesCS3B02G079400 , TraesCS3D02G064700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G010400 - -
2 Sobic.003G040300 cytochrome P450, putative, expressed -
3 Sobic.009G160100 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
4 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
5 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
6 Sobic.003G361800 double-stranded RNA binding motif containing protein, expressed K18998: RNA polymerase II C-terminal domain phosphatase-like 1/2
7 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
8 Sobic.005G048800 expressed protein -
9 Sobic.010G000200 expressed protein -
10 Sobic.003G362800 - -
11 Sobic.001G503700 DUF677 domain containing protein, putative, expressed -
12 Sobic.001G533900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G173200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
14 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
15 Sobic.003G150700 pectinacetylesterase domain containing protein, expressed -
16 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.009G026600 - -
18 Sobic.001G370800 - -
19 Sobic.003G149400 lipase, putative, expressed -
20 Sobic.003G225200 CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic003G025300 Sobic003G025300 Sobic007G010400 Sobic007G010400 Sobic003G025300--Sobic007G010400 Sobic003G040300 Sobic003G040300 Sobic003G025300--Sobic003G040300 Sobic009G160100 Sobic009G160100 Sobic003G025300--Sobic009G160100 Sobic009G208000 Sobic009G208000 Sobic003G025300--Sobic009G208000 Sobic002G001500 Sobic002G001500 Sobic003G025300--Sobic002G001500 Sobic003G361800 Sobic003G361800 Sobic003G025300--Sobic003G361800 Sobic008G103400 Sobic008G103400 Sobic003G025300--Sobic008G103400 Sobic005G048800 Sobic005G048800 Sobic003G025300--Sobic005G048800 Sobic010G000200 Sobic010G000200 Sobic003G025300--Sobic010G000200 Sobic003G149400 Sobic003G149400 Sobic007G010400--Sobic003G149400 Sobic001G367900 Sobic001G367900 Sobic007G010400--Sobic001G367900 Sobic001G503700 Sobic001G503700 Sobic007G010400--Sobic001G503700 Sobic007G010400--Sobic003G025300 Sobic007G010400--Sobic002G001500 Sobic007G077466 Sobic007G077466 Sobic007G010400--Sobic007G077466 Sobic007G010400--Sobic008G103400 Sobic009G122000 Sobic009G122000 Sobic007G010400--Sobic009G122000 Sobic007G010400--Sobic009G160100 Sobic003G040300--Sobic009G208000 Sobic001G454600 Sobic001G454600 Sobic003G040300--Sobic001G454600 Sobic003G040300--Sobic002G001500 Sobic001G090700 Sobic001G090700 Sobic003G040300--Sobic001G090700 Sobic004G181000 Sobic004G181000 Sobic003G040300--Sobic004G181000 Sobic003G040300--Sobic003G025300 Sobic003G040300--Sobic008G103400 Sobic008G170800 Sobic008G170800 Sobic003G040300--Sobic008G170800 Sobic003G362800 Sobic003G362800 Sobic003G040300--Sobic003G362800 Sobic009G160100--Sobic003G362800 Sobic009G160100--Sobic002G001500 Sobic003G155800 Sobic003G155800 Sobic009G160100--Sobic003G155800 Sobic009G160100--Sobic009G208000 Sobic009G160100--Sobic004G181000 Sobic001G113400 Sobic001G113400 Sobic009G160100--Sobic001G113400 Sobic006G169600 Sobic006G169600 Sobic009G160100--Sobic006G169600 Sobic009G160100--Sobic010G000200 Sobic009G160100--Sobic003G025300 Sobic009G208000--Sobic002G001500 Sobic009G208000--Sobic003G040300 Sobic009G208000--Sobic004G181000 Sobic009G208000--Sobic003G362800 Sobic009G208000--Sobic001G113400 Sobic009G208000--Sobic009G160100 Sobic009G208000--Sobic003G155800 Sobic003G150700 Sobic003G150700 Sobic009G208000--Sobic003G150700 Sobic009G208000--Sobic008G103400 Sobic002G001500--Sobic003G362800 Sobic002G001500--Sobic001G113400 Sobic002G001500--Sobic004G181000 Sobic009G223900 Sobic009G223900 Sobic002G001500--Sobic009G223900 Sobic002G001500--Sobic009G208000 Sobic002G001500--Sobic008G103400 Sobic002G085600 Sobic002G085600 Sobic002G001500--Sobic002G085600 Sobic002G001500--Sobic003G155800 Sobic004G173200 Sobic004G173200 Sobic002G001500--Sobic004G173200 Sobic003G361800--Sobic003G025300 Sobic003G361800--Sobic003G040300 Sobic005G063600 Sobic005G063600 Sobic003G361800--Sobic005G063600 Sobic003G361800--Sobic009G208000 Sobic003G361800--Sobic009G160100 Sobic001G169950 Sobic001G169950 Sobic003G361800--Sobic001G169950 Sobic001G159250 Sobic001G159250 Sobic003G361800--Sobic001G159250 Sobic006G008500 Sobic006G008500 Sobic003G361800--Sobic006G008500 Sobic003G361800--Sobic003G150700 Sobic002G110600 Sobic002G110600 Sobic008G103400--Sobic002G110600 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic008G103400--Sobic003G362800 Sobic010G012200 Sobic010G012200 Sobic008G103400--Sobic010G012200 Sobic008G103400--Sobic002G001500 Sobic008G103400--Sobic009G223900 Sobic008G016800 Sobic008G016800 Sobic008G103400--Sobic008G016800 Sobic004G315400 Sobic004G315400 Sobic008G103400--Sobic004G315400 Sobic003G155000 Sobic003G155000 Sobic005G048800--Sobic003G155000 Sobic005G048800--Sobic010G012200 Sobic005G048800--Sobic008G170800 Sobic001G520000 Sobic001G520000 Sobic005G048800--Sobic001G520000 Sobic003G253700 Sobic003G253700 Sobic005G048800--Sobic003G253700 Sobic004G144300 Sobic004G144300 Sobic005G048800--Sobic004G144300 Sobic005G048800--Sobic010G000200 Sobic005G048800--Sobic003G362800 Sobic006G157450 Sobic006G157450 Sobic005G048800--Sobic006G157450 Sobic010G000200--Sobic004G173200 Sobic010G000200--Sobic010G012200 Sobic010G000200--Sobic003G362800 Sobic001G212900 Sobic001G212900 Sobic010G000200--Sobic001G212900 Sobic010G000200--Sobic003G155000 Sobic003G262600 Sobic003G262600 Sobic010G000200--Sobic003G262600 Sobic001G370800 Sobic001G370800 Sobic010G000200--Sobic001G370800 Sobic002G187900 Sobic002G187900 Sobic010G000200--Sobic002G187900 Sobic003G225200 Sobic003G225200 Sobic010G000200--Sobic003G225200
Octagon: transcription factors


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