Gene annotation
Transcriptome id Sobic.001G533900.2,Sobic.001G533900.3
Synonym Sb01g049710
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5X128
Pfam -
Panther DB PTHR37244 PTHR37244:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24110 : -
RAP-DB (Rice) LOC_Os03g02300.1 : expressed protein
MaizeGDB (Corn) Zm00025a000200
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G012200 - K00851: E2.7.1.12, gntK, gluconokinase
2 Sobic.008G103400 universal stress protein domain containing protein, putative, expressed -
3 Sobic.008G170800 OsWAK126 - OsWAK receptor-like protein kinase, expressed -
4 Sobic.004G315400 cation efflux family protein, putative, expressed -
5 Sobic.001G483001 - -
6 Sobic.006G213350 - -
7 Sobic.005G048800 expressed protein -
8 Sobic.001G520000 auxin efflux carrier component, putative, expressed -
9 Sobic.006G279100 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
10 Sobic.002G110600 regulatory protein, putative, expressed -
11 Sobic.005G031400 embryogenesis transmembrane protein, putative, expressed -
12 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
13 Sobic.008G160100 - -
14 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.001G090700 expressed protein -
16 Sobic.003G362800 - -
17 Sobic.010G042300 DTA2, putative, expressed -
18 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
19 Sobic.003G025300 lectin protein kinase family protein, putative, expressed -
20 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G533900 Sobic001G533900 Sobic010G012200 Sobic010G012200 Sobic001G533900--Sobic010G012200 Sobic008G103400 Sobic008G103400 Sobic001G533900--Sobic008G103400 Sobic008G170800 Sobic008G170800 Sobic001G533900--Sobic008G170800 Sobic004G315400 Sobic004G315400 Sobic001G533900--Sobic004G315400 Sobic001G483001 Sobic001G483001 Sobic001G533900--Sobic001G483001 Sobic006G213350 Sobic006G213350 Sobic001G533900--Sobic006G213350 Sobic005G048800 Sobic005G048800 Sobic001G533900--Sobic005G048800 Sobic001G520000 Sobic001G520000 Sobic001G533900--Sobic001G520000 Sobic006G279100 Sobic006G279100 Sobic001G533900--Sobic006G279100 Sobic010G012200--Sobic001G520000 Sobic003G155000 Sobic003G155000 Sobic010G012200--Sobic003G155000 Sobic003G253700 Sobic003G253700 Sobic010G012200--Sobic003G253700 Sobic001G038700 Sobic001G038700 Sobic010G012200--Sobic001G038700 Sobic010G012200--Sobic008G170800 Sobic006G157450 Sobic006G157450 Sobic010G012200--Sobic006G157450 Sobic010G000200 Sobic010G000200 Sobic010G012200--Sobic010G000200 Sobic010G012200--Sobic004G315400 Sobic010G012200--Sobic008G103400 Sobic002G110600 Sobic002G110600 Sobic008G103400--Sobic002G110600 Sobic004G181000 Sobic004G181000 Sobic008G103400--Sobic004G181000 Sobic008G192900 Sobic008G192900 Sobic008G103400--Sobic008G192900 Sobic003G362800 Sobic003G362800 Sobic008G103400--Sobic003G362800 Sobic008G103400--Sobic010G012200 Sobic002G001500 Sobic002G001500 Sobic008G103400--Sobic002G001500 Sobic009G223900 Sobic009G223900 Sobic008G103400--Sobic009G223900 Sobic008G016800 Sobic008G016800 Sobic008G103400--Sobic008G016800 Sobic008G103400--Sobic004G315400 Sobic001G090700 Sobic001G090700 Sobic008G170800--Sobic001G090700 Sobic008G170800--Sobic006G157450 Sobic008G170800--Sobic001G038700 Sobic008G170800--Sobic010G012200 Sobic008G190600 Sobic008G190600 Sobic008G170800--Sobic008G190600 Sobic008G170800--Sobic003G155000 Sobic001G454600 Sobic001G454600 Sobic008G170800--Sobic001G454600 Sobic008G142200 Sobic008G142200 Sobic008G170800--Sobic008G142200 Sobic008G170800--Sobic003G253700 Sobic002G374000 Sobic002G374000 Sobic004G315400--Sobic002G374000 Sobic004G315400--Sobic010G012200 Sobic001G109400 Sobic001G109400 Sobic004G315400--Sobic001G109400 Sobic001G212900 Sobic001G212900 Sobic004G315400--Sobic001G212900 Sobic004G315400--Sobic008G103400 Sobic004G315400--Sobic001G483001 Sobic004G072201 Sobic004G072201 Sobic004G315400--Sobic004G072201 Sobic005G031400 Sobic005G031400 Sobic004G315400--Sobic005G031400 Sobic004G315400--Sobic002G110600 Sobic001G483001--Sobic001G520000 Sobic001G483001--Sobic006G213350 Sobic008G143901 Sobic008G143901 Sobic001G483001--Sobic008G143901 Sobic008G160100 Sobic008G160100 Sobic001G483001--Sobic008G160100 Sobic001G483001--Sobic006G157450 Sobic001G483001--Sobic005G031400 Sobic001G483001--Sobic008G170800 Sobic001G483001--Sobic010G012200 Sobic001G483001--Sobic003G253700 Sobic006G213350--Sobic001G520000 Sobic006G213350--Sobic005G031400 Sobic006G213350--Sobic001G483001 Sobic006G213350--Sobic008G160100 Sobic006G213350--Sobic010G012200 Sobic006G213350--Sobic008G143901 Sobic006G213350--Sobic003G253700 Sobic006G243000 Sobic006G243000 Sobic006G213350--Sobic006G243000 Sobic006G213350--Sobic006G157450 Sobic005G048800--Sobic003G155000 Sobic005G048800--Sobic010G012200 Sobic005G048800--Sobic008G170800 Sobic005G048800--Sobic001G520000 Sobic005G048800--Sobic003G253700 Sobic004G144300 Sobic004G144300 Sobic005G048800--Sobic004G144300 Sobic005G048800--Sobic010G000200 Sobic005G048800--Sobic003G362800 Sobic005G048800--Sobic006G157450 Sobic001G520000--Sobic003G253700 Sobic001G520000--Sobic006G213350 Sobic001G520000--Sobic001G483001 Sobic001G520000--Sobic010G012200 Sobic001G520000--Sobic003G155000 Sobic001G520000--Sobic008G160100 Sobic001G520000--Sobic006G157450 Sobic001G096200 Sobic001G096200 Sobic001G520000--Sobic001G096200 Sobic001G520000--Sobic008G170800 Sobic010G042300 Sobic010G042300 Sobic006G279100--Sobic010G042300 Sobic005G070951 Sobic005G070951 Sobic006G279100--Sobic005G070951 Sobic006G279100--Sobic001G483001 Sobic006G279100--Sobic001G090700 Sobic006G279100--Sobic008G170800 Sobic002G208700 Sobic002G208700 Sobic006G279100--Sobic002G208700 Sobic001G460900 Sobic001G460900 Sobic006G279100--Sobic001G460900 Sobic005G228650 Sobic005G228650 Sobic006G279100--Sobic005G228650 Sobic001G150100 Sobic001G150100 Sobic006G279100--Sobic001G150100
Octagon: transcription factors


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