Gene annotation
Transcriptome id Sobic.003G361800.1
Synonym CPL2, ATCPL2, Sb03g040355
Functional annotation double-stranded RNA binding motif containing protein, expressed
UniProt A0A1B6Q729
Pfam PF03031 PF00035
Panther DB PTHR23081 PTHR23081:SF5
NCBI CDD KOG0323; TFIIF-interacting CTD phosphatases, including NLI-interacting factor
KEGG Orthology K18998; RNA polymerase II C-terminal domain phosphatase-like 1/2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01270 : carboxyl-terminal domain (ctd) phosphatase-like 2
RAP-DB (Rice) LOC_Os01g63820.2 : double-stranded RNA binding motif containing protein, expressed
MaizeGDB (Corn) Zm00025a026796
Brachypodium KQK10654 , KQK10653 , KQK10652
Barley -
Wheat TraesCS3D02G362900 , TraesCS3D02G362900 , TraesCS3D02G362900 , TraesCS3D02G362900 , TraesCS3D02G362900 , TraesCS3D02G362900 , TraesCS3D02G362900 , TraesCS3D02G362900 , TraesCS3A02G370000 , TraesCS3A02G370000 , TraesCS3A02G370000 , TraesCS3B02G401900 , TraesCS3B02G401900 , TraesCS3B02G401900 , TraesCS3B02G401900 , TraesCS3B02G401900
Populus -


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cDNA sequences
Sobic.003G361800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G025300 lectin protein kinase family protein, putative, expressed -
2 Sobic.003G040300 cytochrome P450, putative, expressed -
3 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
4 Sobic.009G208000 high level expression during drought stress(PubMedID : 27006630)@RHsf 10/Hsf sp 17(PubMedID : 27006630)@expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
5 Sobic.009G160100 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
6 Sobic.001G169950 - -
7 Sobic.001G159250 - -
8 Sobic.006G008500 - -
9 Sobic.003G150700 pectinacetylesterase domain containing protein, expressed -
10 Sobic.003G365200 expressed protein -
11 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
12 Sobic.005G048800 expressed protein -
13 Sobic.009G035100 thioesterase family protein, putative, expressed -
14 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
15 Sobic.001G454600 expressed protein -
16 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
17 Sobic.004G342600 cytidylyltransferase domain containing protein, expressed K06210: nicotinamide mononucleotide adenylyltransferase
18 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
19 Sobic.004G165600 glycosyl hydrolases family 17, putative, expressed -
20 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G361800 Sobic003G361800 Sobic003G025300 Sobic003G025300 Sobic003G361800--Sobic003G025300 Sobic003G040300 Sobic003G040300 Sobic003G361800--Sobic003G040300 Sobic005G063600 Sobic005G063600 Sobic003G361800--Sobic005G063600 Sobic009G208000 Sobic009G208000 Sobic003G361800--Sobic009G208000 Sobic009G160100 Sobic009G160100 Sobic003G361800--Sobic009G160100 Sobic001G169950 Sobic001G169950 Sobic003G361800--Sobic001G169950 Sobic001G159250 Sobic001G159250 Sobic003G361800--Sobic001G159250 Sobic006G008500 Sobic006G008500 Sobic003G361800--Sobic006G008500 Sobic003G150700 Sobic003G150700 Sobic003G361800--Sobic003G150700 Sobic007G010400 Sobic007G010400 Sobic003G025300--Sobic007G010400 Sobic003G025300--Sobic003G040300 Sobic003G025300--Sobic009G160100 Sobic003G025300--Sobic009G208000 Sobic002G001500 Sobic002G001500 Sobic003G025300--Sobic002G001500 Sobic003G025300--Sobic003G361800 Sobic008G103400 Sobic008G103400 Sobic003G025300--Sobic008G103400 Sobic005G048800 Sobic005G048800 Sobic003G025300--Sobic005G048800 Sobic010G000200 Sobic010G000200 Sobic003G025300--Sobic010G000200 Sobic003G040300--Sobic009G208000 Sobic001G454600 Sobic001G454600 Sobic003G040300--Sobic001G454600 Sobic003G040300--Sobic002G001500 Sobic001G090700 Sobic001G090700 Sobic003G040300--Sobic001G090700 Sobic004G181000 Sobic004G181000 Sobic003G040300--Sobic004G181000 Sobic003G040300--Sobic003G025300 Sobic003G040300--Sobic008G103400 Sobic008G170800 Sobic008G170800 Sobic003G040300--Sobic008G170800 Sobic003G362800 Sobic003G362800 Sobic003G040300--Sobic003G362800 Sobic003G155800 Sobic003G155800 Sobic005G063600--Sobic003G155800 Sobic004G231501 Sobic004G231501 Sobic005G063600--Sobic004G231501 Sobic001G028500 Sobic001G028500 Sobic005G063600--Sobic001G028500 Sobic006G169600 Sobic006G169600 Sobic005G063600--Sobic006G169600 Sobic003G106100 Sobic003G106100 Sobic005G063600--Sobic003G106100 Sobic009G199900 Sobic009G199900 Sobic005G063600--Sobic009G199900 Sobic001G060200 Sobic001G060200 Sobic005G063600--Sobic001G060200 Sobic007G061500 Sobic007G061500 Sobic005G063600--Sobic007G061500 Sobic004G314100 Sobic004G314100 Sobic005G063600--Sobic004G314100 Sobic009G208000--Sobic002G001500 Sobic009G208000--Sobic003G040300 Sobic009G208000--Sobic004G181000 Sobic009G208000--Sobic003G362800 Sobic001G113400 Sobic001G113400 Sobic009G208000--Sobic001G113400 Sobic009G208000--Sobic009G160100 Sobic009G208000--Sobic003G155800 Sobic009G208000--Sobic003G150700 Sobic009G208000--Sobic008G103400 Sobic009G160100--Sobic003G362800 Sobic009G160100--Sobic002G001500 Sobic009G160100--Sobic003G155800 Sobic009G160100--Sobic009G208000 Sobic009G160100--Sobic004G181000 Sobic009G160100--Sobic001G113400 Sobic009G160100--Sobic006G169600 Sobic009G160100--Sobic010G000200 Sobic009G160100--Sobic003G025300 Sobic003G194900 Sobic003G194900 Sobic001G169950--Sobic003G194900 Sobic001G169950--Sobic003G361800 Sobic004G224400 Sobic004G224400 Sobic001G169950--Sobic004G224400 Sobic001G169950--Sobic006G008500 Sobic009G087600 Sobic009G087600 Sobic001G169950--Sobic009G087600 Sobic004G342600 Sobic004G342600 Sobic001G169950--Sobic004G342600 Sobic001G169950--Sobic001G159250 Sobic005G169900 Sobic005G169900 Sobic001G169950--Sobic005G169900 Sobic009G160300 Sobic009G160300 Sobic001G169950--Sobic009G160300 Sobic001G159250--Sobic006G008500 Sobic001G018550 Sobic001G018550 Sobic001G159250--Sobic001G018550 Sobic004G205900 Sobic004G205900 Sobic001G159250--Sobic004G205900 Sobic010G088100 Sobic010G088100 Sobic001G159250--Sobic010G088100 Sobic007G046600 Sobic007G046600 Sobic001G159250--Sobic007G046600 Sobic001G485901 Sobic001G485901 Sobic001G159250--Sobic001G485901 Sobic001G159250--Sobic001G090700 Sobic002G033200 Sobic002G033200 Sobic001G159250--Sobic002G033200 Sobic002G206900 Sobic002G206900 Sobic001G159250--Sobic002G206900 Sobic003G241600 Sobic003G241600 Sobic006G008500--Sobic003G241600 Sobic006G008500--Sobic001G159250 Sobic006G008500--Sobic001G018550 Sobic006G008500--Sobic007G046600 Sobic006G008500--Sobic003G150700 Sobic006G008500--Sobic005G063600 Sobic002G231400 Sobic002G231400 Sobic006G008500--Sobic002G231400 Sobic002G013600 Sobic002G013600 Sobic006G008500--Sobic002G013600 Sobic004G165600 Sobic004G165600 Sobic006G008500--Sobic004G165600 Sobic003G150700--Sobic009G208000 Sobic003G079600 Sobic003G079600 Sobic003G150700--Sobic003G079600 Sobic004G203600 Sobic004G203600 Sobic003G150700--Sobic004G203600 Sobic003G150700--Sobic009G160100 Sobic006G121200 Sobic006G121200 Sobic003G150700--Sobic006G121200 Sobic003G150700--Sobic006G169600 Sobic003G150700--Sobic003G106100 Sobic001G033200 Sobic001G033200 Sobic003G150700--Sobic001G033200 Sobic003G150700--Sobic006G008500
Octagon: transcription factors


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