Gene annotation
Transcriptome id Sobic.003G251900.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q579
Pfam PF05078
Panther DB PTHR31621 PTHR31621:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46090 : Protein of unknown function (DUF679)
RAP-DB (Rice) LOC_Os05g48840.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G252600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial chaperone BCS1, putative, expressed K08900: mitochondrial chaperone BCS1
2 Sobic.004G181000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G155800 dnaJ homolog subfamily B member 11 precursor, putative, expressed K09517: DnaJ homolog subfamily B member 11
4 Sobic.005G014400 esterase, putative, expressed -
5 Sobic.010G201444 - -
6 Sobic.001G093732 - -
7 Sobic.002G206900 GEX2, putative, expressed -
8 Sobic.009G199900 osFTL10 FT-Like10 homologous to Flowering Locus T gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed K16223: protein FLOWERING LOCUS T
9 Sobic.003G362800 - -
10 Sobic.002G234800 expressed protein -
11 Sobic.004G202750 - -
12 Sobic.001G104100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ACT domain containing protein, expressed -
13 Sobic.009G112500 lipase, putative, expressed -
14 Sobic.006G111400 nodulation receptor kinase precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
15 Sobic.009G223900 protein binding protein, putative, expressed -
16 Sobic.001G350800 - -
17 Sobic.002G399000 expressed protein -
18 Sobic.002G001500 pentatricopeptide containing protein, putative, expressed -
19 Sobic.006G024400 receptor-like protein kinase, putative, expressed -
20 Sobic.005G063600 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4


Gene co-expression network
sample Sobic003G251900 Sobic003G251900 Sobic009G252600 Sobic009G252600 Sobic003G251900--Sobic009G252600 Sobic004G181000 Sobic004G181000 Sobic003G251900--Sobic004G181000 Sobic003G155800 Sobic003G155800 Sobic003G251900--Sobic003G155800 Sobic005G014400 Sobic005G014400 Sobic003G251900--Sobic005G014400 Sobic010G201444 Sobic010G201444 Sobic003G251900--Sobic010G201444 Sobic001G093732 Sobic001G093732 Sobic003G251900--Sobic001G093732 Sobic002G206900 Sobic002G206900 Sobic003G251900--Sobic002G206900 Sobic009G199900 Sobic009G199900 Sobic003G251900--Sobic009G199900 Sobic003G362800 Sobic003G362800 Sobic003G251900--Sobic003G362800 Sobic009G252600--Sobic003G251900 Sobic009G252600--Sobic003G155800 Sobic009G252600--Sobic001G093732 Sobic009G252600--Sobic002G206900 Sobic001G520000 Sobic001G520000 Sobic009G252600--Sobic001G520000 Sobic001G483001 Sobic001G483001 Sobic009G252600--Sobic001G483001 Sobic003G253700 Sobic003G253700 Sobic009G252600--Sobic003G253700 Sobic010G261500 Sobic010G261500 Sobic009G252600--Sobic010G261500 Sobic006G157450 Sobic006G157450 Sobic009G252600--Sobic006G157450 Sobic002G001500 Sobic002G001500 Sobic004G181000--Sobic002G001500 Sobic008G103400 Sobic008G103400 Sobic004G181000--Sobic008G103400 Sobic004G181000--Sobic003G362800 Sobic009G223900 Sobic009G223900 Sobic004G181000--Sobic009G223900 Sobic004G181000--Sobic003G155800 Sobic009G208000 Sobic009G208000 Sobic004G181000--Sobic009G208000 Sobic004G181000--Sobic003G251900 Sobic002G234800 Sobic002G234800 Sobic004G181000--Sobic002G234800 Sobic001G113400 Sobic001G113400 Sobic004G181000--Sobic001G113400 Sobic003G155800--Sobic003G362800 Sobic003G155800--Sobic004G181000 Sobic003G155800--Sobic003G253700 Sobic005G063600 Sobic005G063600 Sobic003G155800--Sobic005G063600 Sobic003G155800--Sobic009G223900 Sobic003G155800--Sobic009G252600 Sobic003G155800--Sobic002G001500 Sobic003G155800--Sobic001G520000 Sobic003G155800--Sobic002G206900 Sobic005G014400--Sobic003G251900 Sobic005G014400--Sobic001G093732 Sobic005G014400--Sobic004G181000 Sobic001G350800 Sobic001G350800 Sobic005G014400--Sobic001G350800 Sobic006G165501 Sobic006G165501 Sobic005G014400--Sobic006G165501 Sobic009G112500 Sobic009G112500 Sobic005G014400--Sobic009G112500 Sobic005G025400 Sobic005G025400 Sobic005G014400--Sobic005G025400 Sobic008G016800 Sobic008G016800 Sobic005G014400--Sobic008G016800 Sobic005G014400--Sobic001G113400 Sobic010G201444--Sobic001G093732 Sobic006G103800 Sobic006G103800 Sobic010G201444--Sobic006G103800 Sobic010G201444--Sobic003G251900 Sobic008G007200 Sobic008G007200 Sobic010G201444--Sobic008G007200 Sobic010G201444--Sobic009G252600 Sobic010G201444--Sobic005G014400 Sobic006G024400 Sobic006G024400 Sobic010G201444--Sobic006G024400 Sobic010G201444--Sobic004G181000 Sobic006G154900 Sobic006G154900 Sobic010G201444--Sobic006G154900 Sobic001G093732--Sobic009G252600 Sobic001G093732--Sobic010G201444 Sobic001G093732--Sobic003G251900 Sobic001G093732--Sobic005G014400 Sobic001G093732--Sobic008G007200 Sobic001G093732--Sobic001G483001 Sobic007G046600 Sobic007G046600 Sobic001G093732--Sobic007G046600 Sobic001G093732--Sobic006G154900 Sobic006G279100 Sobic006G279100 Sobic001G093732--Sobic006G279100 Sobic001G454600 Sobic001G454600 Sobic002G206900--Sobic001G454600 Sobic003G155000 Sobic003G155000 Sobic002G206900--Sobic003G155000 Sobic002G206900--Sobic003G155800 Sobic002G206900--Sobic003G362800 Sobic002G206900--Sobic003G253700 Sobic002G206900--Sobic001G483001 Sobic002G206900--Sobic001G520000 Sobic008G170800 Sobic008G170800 Sobic002G206900--Sobic008G170800 Sobic002G206900--Sobic009G252600 Sobic001G104100 Sobic001G104100 Sobic009G199900--Sobic001G104100 Sobic001G028500 Sobic001G028500 Sobic009G199900--Sobic001G028500 Sobic003G106100 Sobic003G106100 Sobic009G199900--Sobic003G106100 Sobic004G202750 Sobic004G202750 Sobic009G199900--Sobic004G202750 Sobic004G350600 Sobic004G350600 Sobic009G199900--Sobic004G350600 Sobic004G231501 Sobic004G231501 Sobic009G199900--Sobic004G231501 Sobic004G026000 Sobic004G026000 Sobic009G199900--Sobic004G026000 Sobic009G199900--Sobic003G155800 Sobic004G314100 Sobic004G314100 Sobic009G199900--Sobic004G314100 Sobic003G362800--Sobic002G001500 Sobic003G362800--Sobic001G113400 Sobic003G362800--Sobic003G155800 Sobic003G362800--Sobic004G181000 Sobic004G144300 Sobic004G144300 Sobic003G362800--Sobic004G144300 Sobic003G362800--Sobic008G103400 Sobic010G000200 Sobic010G000200 Sobic003G362800--Sobic010G000200 Sobic004G173200 Sobic004G173200 Sobic003G362800--Sobic004G173200 Sobic003G001650 Sobic003G001650 Sobic003G362800--Sobic003G001650
Octagon: transcription factors


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