Gene annotation
Transcriptome id Sobic.007G187500.1
Synonym
Functional annotation -
UniProt A0A1B6PII0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G160300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
2 Sobic.004G347833 - -
3 Sobic.009G180900 disease resistance RPP13-like protein 1, putative, expressed -
4 Sobic.001G228500 - -
5 Sobic.002G215600 BRCA1 C Terminus domain containing protein, expressed -
6 Sobic.007G173400 - -
7 Sobic.009G181000 - -
8 Sobic.008G064200 - -
9 Sobic.010G210400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
10 Sobic.004G089801 - -
11 Sobic.002G099932 - -
12 Sobic.007G210200 Highest expression level in seeds(PubMedID : 27501690)@OsSPL14 - SBP-box gene family member, expressed -
13 Sobic.002G321700 - -
14 Sobic.009G079700 C2 domain containing protein, putative, expressed -
15 Sobic.008G153300 RING-H2 finger protein ATL3J, putative, expressed K10663: E3 ubiquitin-protein ligase ATL4
16 Sobic.006G139900 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.005G110553 - -
18 Sobic.004G074400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
19 Sobic.010G000401 - -
20 Sobic.004G045000 phytosulfokine receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic007G187500 Sobic007G187500 Sobic002G160300 Sobic002G160300 Sobic007G187500--Sobic002G160300 Sobic004G347833 Sobic004G347833 Sobic007G187500--Sobic004G347833 Sobic009G180900 Sobic009G180900 Sobic007G187500--Sobic009G180900 Sobic001G228500 Sobic001G228500 Sobic007G187500--Sobic001G228500 Sobic002G215600 Sobic002G215600 Sobic007G187500--Sobic002G215600 Sobic007G173400 Sobic007G173400 Sobic007G187500--Sobic007G173400 Sobic009G181000 Sobic009G181000 Sobic007G187500--Sobic009G181000 Sobic008G064200 Sobic008G064200 Sobic007G187500--Sobic008G064200 Sobic010G210400 Sobic010G210400 Sobic007G187500--Sobic010G210400 Sobic002G160300--Sobic001G228500 Sobic002G160300--Sobic007G187500 Sobic002G099932 Sobic002G099932 Sobic002G160300--Sobic002G099932 Sobic004G074400 Sobic004G074400 Sobic002G160300--Sobic004G074400 Sobic004G068600 Sobic004G068600 Sobic002G160300--Sobic004G068600 Sobic002G160300--Sobic009G181000 Sobic002G160300--Sobic009G180900 Sobic002G321700 Sobic002G321700 Sobic002G160300--Sobic002G321700 Sobic008G147600 Sobic008G147600 Sobic002G160300--Sobic008G147600 Sobic004G347833--Sobic007G173400 Sobic004G347833--Sobic009G180900 Sobic004G347833--Sobic007G187500 Sobic004G347833--Sobic008G064200 Sobic004G272000 Sobic004G272000 Sobic004G347833--Sobic004G272000 Sobic004G347833--Sobic004G074400 Sobic002G219100 Sobic002G219100 Sobic004G347833--Sobic002G219100 Sobic004G347833--Sobic001G228500 Sobic001G234766 Sobic001G234766 Sobic004G347833--Sobic001G234766 Sobic009G180900--Sobic004G074400 Sobic006G027800 Sobic006G027800 Sobic009G180900--Sobic006G027800 Sobic009G180900--Sobic004G347833 Sobic009G180900--Sobic008G147600 Sobic004G279400 Sobic004G279400 Sobic009G180900--Sobic004G279400 Sobic009G180900--Sobic002G219100 Sobic005G150700 Sobic005G150700 Sobic009G180900--Sobic005G150700 Sobic009G218450 Sobic009G218450 Sobic009G180900--Sobic009G218450 Sobic010G175100 Sobic010G175100 Sobic009G180900--Sobic010G175100 Sobic001G228500--Sobic002G160300 Sobic010G187950 Sobic010G187950 Sobic001G228500--Sobic010G187950 Sobic001G228500--Sobic004G068600 Sobic009G183650 Sobic009G183650 Sobic001G228500--Sobic009G183650 Sobic002G043201 Sobic002G043201 Sobic001G228500--Sobic002G043201 Sobic010G019500 Sobic010G019500 Sobic001G228500--Sobic010G019500 Sobic010G042300 Sobic010G042300 Sobic001G228500--Sobic010G042300 Sobic006G268100 Sobic006G268100 Sobic001G228500--Sobic006G268100 Sobic001G228500--Sobic007G173400 Sobic006G049000 Sobic006G049000 Sobic002G215600--Sobic006G049000 Sobic008G153300 Sobic008G153300 Sobic002G215600--Sobic008G153300 Sobic003G059500 Sobic003G059500 Sobic002G215600--Sobic003G059500 Sobic004G167500 Sobic004G167500 Sobic002G215600--Sobic004G167500 Sobic004G045000 Sobic004G045000 Sobic002G215600--Sobic004G045000 Sobic003G356500 Sobic003G356500 Sobic002G215600--Sobic003G356500 Sobic003G438100 Sobic003G438100 Sobic002G215600--Sobic003G438100 Sobic001G468900 Sobic001G468900 Sobic002G215600--Sobic001G468900 Sobic001G367900 Sobic001G367900 Sobic002G215600--Sobic001G367900 Sobic007G173400--Sobic004G347833 Sobic007G173400--Sobic001G234766 Sobic007G173400--Sobic004G272000 Sobic010G160850 Sobic010G160850 Sobic007G173400--Sobic010G160850 Sobic007G173400--Sobic001G228500 Sobic001G208166 Sobic001G208166 Sobic007G173400--Sobic001G208166 Sobic007G173400--Sobic008G064200 Sobic007G173400--Sobic007G187500 Sobic004G089801 Sobic004G089801 Sobic007G173400--Sobic004G089801 Sobic009G181000--Sobic002G321700 Sobic009G181000--Sobic002G099932 Sobic009G181000--Sobic009G180900 Sobic009G181000--Sobic010G042300 Sobic009G181000--Sobic007G187500 Sobic002G086900 Sobic002G086900 Sobic009G181000--Sobic002G086900 Sobic009G181000--Sobic002G160300 Sobic004G091300 Sobic004G091300 Sobic009G181000--Sobic004G091300 Sobic009G181000--Sobic004G279400 Sobic008G064200--Sobic009G218450 Sobic008G064200--Sobic004G347833 Sobic005G083400 Sobic005G083400 Sobic008G064200--Sobic005G083400 Sobic008G064200--Sobic006G027800 Sobic006G075200 Sobic006G075200 Sobic008G064200--Sobic006G075200 Sobic008G064200--Sobic009G180900 Sobic001G074601 Sobic001G074601 Sobic008G064200--Sobic001G074601 Sobic007G149950 Sobic007G149950 Sobic008G064200--Sobic007G149950 Sobic001G195866 Sobic001G195866 Sobic008G064200--Sobic001G195866 Sobic009G079700 Sobic009G079700 Sobic010G210400--Sobic009G079700 Sobic001G070900 Sobic001G070900 Sobic010G210400--Sobic001G070900 Sobic010G210400--Sobic004G272000 Sobic010G210400--Sobic004G089801 Sobic004G007200 Sobic004G007200 Sobic010G210400--Sobic004G007200 Sobic002G365300 Sobic002G365300 Sobic010G210400--Sobic002G365300 Sobic004G343733 Sobic004G343733 Sobic010G210400--Sobic004G343733 Sobic010G210400--Sobic010G187950 Sobic010G210400--Sobic002G215600
Octagon: transcription factors


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