Gene annotation
Transcriptome id Sobic.004G045000.1
Synonym Sb04g003860
Functional annotation phytosulfokine receptor precursor, putative, expressed
UniProt A0A1Z5RKW9
Pfam PF13855 PF00560 PF08263
Panther DB PTHR27000:SF28 PTHR27000
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G72300 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os02g05980.1 : phytosulfokine receptor precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ93402 , KQJ93395 , KQJ93392 , PNT65910
Barley HORVU6Hr1G024800.8 , HORVU6Hr1G024800.9 , HORVU6Hr1G024800.2 , HORVU6Hr1G024800.3 , HORVU6Hr1G024800.7 , HORVU6Hr1G024800.4 , HORVU6Hr1G024800.5 , HORVU6Hr1G023770.5 , HORVU6Hr1G023770.3 , HORVU6Hr1G023770.2 , HORVU6Hr1G024660.6 , HORVU6Hr1G024660.7 , HORVU6Hr1G024660.4 , HORVU6Hr1G024660.5 , HORVU6Hr1G024660.2 , HORVU6Hr1G024660.3 , HORVU6Hr1G024660.1 , HORVU6Hr1G031910.1 , HORVU6Hr1G024800.10 , HORVU6Hr1G024800.11 , HORVU6Hr1G023770.4 , HORVU6Hr1G024800.6 , HORVU6Hr1G024800.12
Wheat TraesCS6B02G158000 , TraesCS6B02G158000 , TraesCS6A02G125600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G059500 verticillium wilt disease resistance protein, putative, expressed -
2 Sobic.010G000401 - -
3 Sobic.001G005100 lipid binding protein, putative, expressed -
4 Sobic.003G391800 expressed protein -
5 Sobic.003G278800 lipase, putative, expressed -
6 Sobic.002G268250 - -
7 Sobic.002G215600 BRCA1 C Terminus domain containing protein, expressed -
8 Sobic.002G162900 - -
9 Sobic.003G356500 "uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL101 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.002G033100 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.004G089801 - -
12 Sobic.001G468900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@DUF623 domain containing protein, expressed -
13 Sobic.002G365300 NBS-LRR type disease resistance protein, putative, expressed -
14 Sobic.004G167500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G255700 - -
16 Sobic.006G155400 expressed protein -
17 Sobic.005G150250 - -
18 Sobic.001G112300 OsCam3 - Calmodulin, expressed K02183: calmodulin
19 Sobic.002G240300 expressed protein K19307: 25S rRNA (uracil2634-N3)-methyltransferase
20 Sobic.006G222200 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic004G045000 Sobic004G045000 Sobic003G059500 Sobic003G059500 Sobic004G045000--Sobic003G059500 Sobic010G000401 Sobic010G000401 Sobic004G045000--Sobic010G000401 Sobic001G005100 Sobic001G005100 Sobic004G045000--Sobic001G005100 Sobic003G391800 Sobic003G391800 Sobic004G045000--Sobic003G391800 Sobic003G278800 Sobic003G278800 Sobic004G045000--Sobic003G278800 Sobic002G268250 Sobic002G268250 Sobic004G045000--Sobic002G268250 Sobic002G215600 Sobic002G215600 Sobic004G045000--Sobic002G215600 Sobic002G162900 Sobic002G162900 Sobic004G045000--Sobic002G162900 Sobic003G356500 Sobic003G356500 Sobic004G045000--Sobic003G356500 Sobic003G059500--Sobic004G045000 Sobic003G059500--Sobic003G356500 Sobic003G059500--Sobic010G000401 Sobic001G468900 Sobic001G468900 Sobic003G059500--Sobic001G468900 Sobic004G089801 Sobic004G089801 Sobic003G059500--Sobic004G089801 Sobic003G059500--Sobic001G005100 Sobic004G167500 Sobic004G167500 Sobic003G059500--Sobic004G167500 Sobic003G059500--Sobic002G215600 Sobic003G149700 Sobic003G149700 Sobic003G059500--Sobic003G149700 Sobic010G000401--Sobic001G005100 Sobic010G000401--Sobic004G045000 Sobic010G000401--Sobic003G391800 Sobic010G000401--Sobic003G059500 Sobic002G365300 Sobic002G365300 Sobic010G000401--Sobic002G365300 Sobic002G033100 Sobic002G033100 Sobic010G000401--Sobic002G033100 Sobic010G000401--Sobic004G089801 Sobic001G403900 Sobic001G403900 Sobic010G000401--Sobic001G403900 Sobic010G000401--Sobic001G468900 Sobic001G005100--Sobic003G278800 Sobic001G005100--Sobic002G033100 Sobic001G005100--Sobic002G162900 Sobic001G005100--Sobic001G403900 Sobic006G222200 Sobic006G222200 Sobic001G005100--Sobic006G222200 Sobic001G005100--Sobic010G000401 Sobic001G221750 Sobic001G221750 Sobic001G005100--Sobic001G221750 Sobic001G005100--Sobic004G089801 Sobic004G055400 Sobic004G055400 Sobic001G005100--Sobic004G055400 Sobic003G391800--Sobic010G000401 Sobic003G391800--Sobic004G045000 Sobic003G391800--Sobic001G005100 Sobic003G391800--Sobic002G268250 Sobic001G112300 Sobic001G112300 Sobic003G391800--Sobic001G112300 Sobic003G391800--Sobic003G278800 Sobic003G391800--Sobic002G162900 Sobic003G391800--Sobic001G403900 Sobic007G069750 Sobic007G069750 Sobic003G391800--Sobic007G069750 Sobic003G278800--Sobic002G162900 Sobic003G278800--Sobic001G005100 Sobic003G278800--Sobic004G055400 Sobic003G278800--Sobic001G112300 Sobic010G129900 Sobic010G129900 Sobic003G278800--Sobic010G129900 Sobic003G278800--Sobic002G033100 Sobic003G278800--Sobic004G045000 Sobic003G278800--Sobic007G069750 Sobic003G278800--Sobic002G268250 Sobic002G268250--Sobic002G162900 Sobic002G268250--Sobic003G278800 Sobic002G268250--Sobic003G391800 Sobic002G268250--Sobic004G045000 Sobic002G268250--Sobic004G055400 Sobic002G235000 Sobic002G235000 Sobic002G268250--Sobic002G235000 Sobic002G268250--Sobic001G005100 Sobic002G268250--Sobic002G365300 Sobic010G083100 Sobic010G083100 Sobic002G268250--Sobic010G083100 Sobic006G049000 Sobic006G049000 Sobic002G215600--Sobic006G049000 Sobic008G153300 Sobic008G153300 Sobic002G215600--Sobic008G153300 Sobic002G215600--Sobic003G059500 Sobic002G215600--Sobic004G167500 Sobic002G215600--Sobic004G045000 Sobic002G215600--Sobic003G356500 Sobic003G438100 Sobic003G438100 Sobic002G215600--Sobic003G438100 Sobic002G215600--Sobic001G468900 Sobic001G367900 Sobic001G367900 Sobic002G215600--Sobic001G367900 Sobic002G162900--Sobic003G278800 Sobic002G162900--Sobic004G055400 Sobic002G162900--Sobic001G005100 Sobic002G162900--Sobic002G268250 Sobic002G162900--Sobic010G129900 Sobic002G162900--Sobic007G069750 Sobic002G162900--Sobic001G403900 Sobic002G162900--Sobic001G112300 Sobic002G162900--Sobic010G083100 Sobic003G356500--Sobic003G149700 Sobic005G150250 Sobic005G150250 Sobic003G356500--Sobic005G150250 Sobic006G155400 Sobic006G155400 Sobic003G356500--Sobic006G155400 Sobic002G132201 Sobic002G132201 Sobic003G356500--Sobic002G132201 Sobic009G022600 Sobic009G022600 Sobic003G356500--Sobic009G022600 Sobic003G356500--Sobic001G468900 Sobic003G193900 Sobic003G193900 Sobic003G356500--Sobic003G193900 Sobic003G356500--Sobic003G059500 Sobic003G356500--Sobic004G089801
Octagon: transcription factors


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