Gene annotation
Transcriptome id Sobic.003G278800.3,Sobic.003G278800.2
Synonym Sb03g033060
Functional annotation lipase, putative, expressed
UniProt C5XIC5
Pfam PF01764
Panther DB PTHR31479 PTHR31479:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G10955 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g52180.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a027758
Brachypodium -
Barley HORVU3Hr1G068280.1
Wheat TraesCS3A02G288100 , TraesCS3D02G287900 , TraesCS3B02G322700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G162900 - -
2 Sobic.001G005100 lipid binding protein, putative, expressed -
3 Sobic.004G055400 - -
4 Sobic.001G112300 OsCam3 - Calmodulin, expressed K02183: calmodulin
5 Sobic.010G129900 expressed protein -
6 Sobic.002G033100 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.004G045000 phytosulfokine receptor precursor, putative, expressed -
8 Sobic.007G069750 - -
9 Sobic.002G268250 - -
10 Sobic.006G222200 MBTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.001G221750 - -
12 Sobic.002G237400 expressed protein -
13 Sobic.001G403900 ECAGL1 - ECA1 gametogenesis related family protein precursor, expressed -
14 Sobic.003G356500 "uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in pre-flowering drought tolerance (QSTG2_4)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL101 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.006G155400 expressed protein -
16 Sobic.003G391800 expressed protein -
17 Sobic.010G083100 CXE carboxylesterase, putative, expressed -
18 Sobic.005G150250 - -
19 Sobic.002G213050 - -
20 Sobic.004G089801 - -


Gene co-expression network
sample Sobic003G278800 Sobic003G278800 Sobic002G162900 Sobic002G162900 Sobic003G278800--Sobic002G162900 Sobic001G005100 Sobic001G005100 Sobic003G278800--Sobic001G005100 Sobic004G055400 Sobic004G055400 Sobic003G278800--Sobic004G055400 Sobic001G112300 Sobic001G112300 Sobic003G278800--Sobic001G112300 Sobic010G129900 Sobic010G129900 Sobic003G278800--Sobic010G129900 Sobic002G033100 Sobic002G033100 Sobic003G278800--Sobic002G033100 Sobic004G045000 Sobic004G045000 Sobic003G278800--Sobic004G045000 Sobic007G069750 Sobic007G069750 Sobic003G278800--Sobic007G069750 Sobic002G268250 Sobic002G268250 Sobic003G278800--Sobic002G268250 Sobic002G162900--Sobic003G278800 Sobic002G162900--Sobic004G055400 Sobic002G162900--Sobic001G005100 Sobic002G162900--Sobic002G268250 Sobic002G162900--Sobic010G129900 Sobic002G162900--Sobic007G069750 Sobic001G403900 Sobic001G403900 Sobic002G162900--Sobic001G403900 Sobic002G162900--Sobic001G112300 Sobic010G083100 Sobic010G083100 Sobic002G162900--Sobic010G083100 Sobic001G005100--Sobic003G278800 Sobic001G005100--Sobic002G033100 Sobic001G005100--Sobic002G162900 Sobic001G005100--Sobic001G403900 Sobic006G222200 Sobic006G222200 Sobic001G005100--Sobic006G222200 Sobic010G000401 Sobic010G000401 Sobic001G005100--Sobic010G000401 Sobic001G221750 Sobic001G221750 Sobic001G005100--Sobic001G221750 Sobic004G089801 Sobic004G089801 Sobic001G005100--Sobic004G089801 Sobic001G005100--Sobic004G055400 Sobic004G055400--Sobic010G129900 Sobic004G055400--Sobic002G162900 Sobic004G055400--Sobic007G069750 Sobic005G199500 Sobic005G199500 Sobic004G055400--Sobic005G199500 Sobic004G055400--Sobic003G278800 Sobic004G055400--Sobic010G083100 Sobic006G018500 Sobic006G018500 Sobic004G055400--Sobic006G018500 Sobic004G055400--Sobic001G112300 Sobic002G213050 Sobic002G213050 Sobic004G055400--Sobic002G213050 Sobic001G112300--Sobic007G069750 Sobic001G112300--Sobic010G129900 Sobic001G112300--Sobic002G213050 Sobic002G237400 Sobic002G237400 Sobic001G112300--Sobic002G237400 Sobic001G112300--Sobic004G055400 Sobic009G127201 Sobic009G127201 Sobic001G112300--Sobic009G127201 Sobic001G472900 Sobic001G472900 Sobic001G112300--Sobic001G472900 Sobic002G269700 Sobic002G269700 Sobic001G112300--Sobic002G269700 Sobic001G112300--Sobic003G278800 Sobic010G129900--Sobic007G069750 Sobic010G129900--Sobic004G055400 Sobic010G129900--Sobic005G199500 Sobic010G129900--Sobic001G112300 Sobic010G129900--Sobic001G403900 Sobic010G129900--Sobic002G237400 Sobic010G129900--Sobic002G213050 Sobic010G129900--Sobic001G221750 Sobic010G129900--Sobic002G162900 Sobic002G033100--Sobic006G222200 Sobic002G033100--Sobic001G005100 Sobic002G033100--Sobic001G221750 Sobic005G150250 Sobic005G150250 Sobic002G033100--Sobic005G150250 Sobic002G033100--Sobic002G237400 Sobic006G155400 Sobic006G155400 Sobic002G033100--Sobic006G155400 Sobic002G033100--Sobic003G278800 Sobic001G084133 Sobic001G084133 Sobic002G033100--Sobic001G084133 Sobic002G033100--Sobic004G089801 Sobic003G059500 Sobic003G059500 Sobic004G045000--Sobic003G059500 Sobic004G045000--Sobic010G000401 Sobic004G045000--Sobic001G005100 Sobic003G391800 Sobic003G391800 Sobic004G045000--Sobic003G391800 Sobic004G045000--Sobic003G278800 Sobic004G045000--Sobic002G268250 Sobic002G215600 Sobic002G215600 Sobic004G045000--Sobic002G215600 Sobic004G045000--Sobic002G162900 Sobic003G356500 Sobic003G356500 Sobic004G045000--Sobic003G356500 Sobic007G069750--Sobic005G199500 Sobic007G069750--Sobic010G129900 Sobic007G069750--Sobic002G213050 Sobic007G069750--Sobic001G112300 Sobic007G069750--Sobic006G018500 Sobic007G069750--Sobic004G055400 Sobic007G069750--Sobic002G269700 Sobic007G069750--Sobic001G472900 Sobic007G069750--Sobic002G237400 Sobic002G268250--Sobic002G162900 Sobic002G268250--Sobic003G278800 Sobic002G268250--Sobic003G391800 Sobic002G268250--Sobic004G045000 Sobic002G268250--Sobic004G055400 Sobic002G235000 Sobic002G235000 Sobic002G268250--Sobic002G235000 Sobic002G268250--Sobic001G005100 Sobic002G365300 Sobic002G365300 Sobic002G268250--Sobic002G365300 Sobic002G268250--Sobic010G083100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.