Gene annotation
Transcriptome id Sobic.004G074400.1
Synonym Sb04g006150, RPS3, RPM1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
disease resistance protein RPM1, putative, expressed
UniProt A0A1Z5RM58
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF522
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os02g09790.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G180900 disease resistance RPP13-like protein 1, putative, expressed -
2 Sobic.004G279400 ZR1 protein, putative, expressed -
3 Sobic.003G068150 - -
4 Sobic.002G208700 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
5 Sobic.002G099932 - -
6 Sobic.008G147600 - -
7 Sobic.009G037500 expressed protein -
8 Sobic.007G149500 expressed protein -
9 Sobic.002G219100 - -
10 Sobic.004G221100 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
11 Sobic.009G020600 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.005G150700 resistance protein, putative, expressed -
13 Sobic.004G347833 - -
14 Sobic.007G175000 carrier, putative, expressed -
15 Sobic.001G145550 - -
16 Sobic.002G160300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
17 Sobic.006G165200 amino acid permease family protein, putative, expressed -
18 Sobic.001G228500 - -
19 Sobic.010G175100 S-locus-like receptor protein kinase, putative, expressed -
20 Sobic.002G321700 - -


Gene co-expression network
sample Sobic004G074400 Sobic004G074400 Sobic009G180900 Sobic009G180900 Sobic004G074400--Sobic009G180900 Sobic004G279400 Sobic004G279400 Sobic004G074400--Sobic004G279400 Sobic003G068150 Sobic003G068150 Sobic004G074400--Sobic003G068150 Sobic002G208700 Sobic002G208700 Sobic004G074400--Sobic002G208700 Sobic002G099932 Sobic002G099932 Sobic004G074400--Sobic002G099932 Sobic008G147600 Sobic008G147600 Sobic004G074400--Sobic008G147600 Sobic009G037500 Sobic009G037500 Sobic004G074400--Sobic009G037500 Sobic007G149500 Sobic007G149500 Sobic004G074400--Sobic007G149500 Sobic002G219100 Sobic002G219100 Sobic004G074400--Sobic002G219100 Sobic009G180900--Sobic004G074400 Sobic006G027800 Sobic006G027800 Sobic009G180900--Sobic006G027800 Sobic004G347833 Sobic004G347833 Sobic009G180900--Sobic004G347833 Sobic009G180900--Sobic008G147600 Sobic009G180900--Sobic004G279400 Sobic009G180900--Sobic002G219100 Sobic005G150700 Sobic005G150700 Sobic009G180900--Sobic005G150700 Sobic009G218450 Sobic009G218450 Sobic009G180900--Sobic009G218450 Sobic010G175100 Sobic010G175100 Sobic009G180900--Sobic010G175100 Sobic004G279400--Sobic004G074400 Sobic004G279400--Sobic002G208700 Sobic006G279100 Sobic006G279100 Sobic004G279400--Sobic006G279100 Sobic004G279400--Sobic007G149500 Sobic001G150100 Sobic001G150100 Sobic004G279400--Sobic001G150100 Sobic004G279400--Sobic003G068150 Sobic004G279400--Sobic009G180900 Sobic009G020600 Sobic009G020600 Sobic004G279400--Sobic009G020600 Sobic006G165200 Sobic006G165200 Sobic004G279400--Sobic006G165200 Sobic003G068150--Sobic004G074400 Sobic005G116700 Sobic005G116700 Sobic003G068150--Sobic005G116700 Sobic001G279800 Sobic001G279800 Sobic003G068150--Sobic001G279800 Sobic003G068200 Sobic003G068200 Sobic003G068150--Sobic003G068200 Sobic003G068150--Sobic004G279400 Sobic003G068150--Sobic009G037500 Sobic005G187700 Sobic005G187700 Sobic003G068150--Sobic005G187700 Sobic003G068150--Sobic005G150700 Sobic010G055900 Sobic010G055900 Sobic003G068150--Sobic010G055900 Sobic006G215650 Sobic006G215650 Sobic002G208700--Sobic006G215650 Sobic010G042300 Sobic010G042300 Sobic002G208700--Sobic010G042300 Sobic002G208700--Sobic006G279100 Sobic003G329300 Sobic003G329300 Sobic002G208700--Sobic003G329300 Sobic002G208700--Sobic007G149500 Sobic001G090700 Sobic001G090700 Sobic002G208700--Sobic001G090700 Sobic002G302800 Sobic002G302800 Sobic002G208700--Sobic002G302800 Sobic007G137100 Sobic007G137100 Sobic002G208700--Sobic007G137100 Sobic001G187900 Sobic001G187900 Sobic002G208700--Sobic001G187900 Sobic002G099932--Sobic004G074400 Sobic009G181000 Sobic009G181000 Sobic002G099932--Sobic009G181000 Sobic002G160300 Sobic002G160300 Sobic002G099932--Sobic002G160300 Sobic002G321700 Sobic002G321700 Sobic002G099932--Sobic002G321700 Sobic002G099932--Sobic009G037500 Sobic001G182100 Sobic001G182100 Sobic002G099932--Sobic001G182100 Sobic002G099932--Sobic004G347833 Sobic001G496000 Sobic001G496000 Sobic002G099932--Sobic001G496000 Sobic002G099932--Sobic009G180900 Sobic008G147600--Sobic002G219100 Sobic008G147600--Sobic004G074400 Sobic008G147600--Sobic009G180900 Sobic008G147600--Sobic005G150700 Sobic008G147600--Sobic006G165200 Sobic008G147600--Sobic009G037500 Sobic010G025600 Sobic010G025600 Sobic008G147600--Sobic010G025600 Sobic008G147600--Sobic009G020600 Sobic008G147600--Sobic002G099932 Sobic001G145550 Sobic001G145550 Sobic009G037500--Sobic001G145550 Sobic001G422001 Sobic001G422001 Sobic009G037500--Sobic001G422001 Sobic009G037500--Sobic005G150700 Sobic009G037500--Sobic009G020600 Sobic009G037500--Sobic007G149500 Sobic009G037500--Sobic001G279800 Sobic009G037500--Sobic002G219100 Sobic006G094900 Sobic006G094900 Sobic009G037500--Sobic006G094900 Sobic007G175000 Sobic007G175000 Sobic009G037500--Sobic007G175000 Sobic002G046150 Sobic002G046150 Sobic007G149500--Sobic002G046150 Sobic007G149500--Sobic001G145550 Sobic007G149500--Sobic005G187700 Sobic007G149500--Sobic002G208700 Sobic001G100300 Sobic001G100300 Sobic007G149500--Sobic001G100300 Sobic007G149500--Sobic001G187900 Sobic007G149500--Sobic009G037500 Sobic003G341900 Sobic003G341900 Sobic007G149500--Sobic003G341900 Sobic009G173700 Sobic009G173700 Sobic007G149500--Sobic009G173700 Sobic002G219100--Sobic005G150700 Sobic002G219100--Sobic001G279800 Sobic002G219100--Sobic009G037500 Sobic002G219100--Sobic010G025600 Sobic002G219100--Sobic008G147600 Sobic003G210500 Sobic003G210500 Sobic002G219100--Sobic003G210500 Sobic003G012750 Sobic003G012750 Sobic002G219100--Sobic003G012750 Sobic001G144100 Sobic001G144100 Sobic002G219100--Sobic001G144100 Sobic002G219100--Sobic009G180900
Octagon: transcription factors


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