Gene annotation
Transcriptome id Sobic.004G279400.1,Sobic.004G279400.2
Synonym Sb04g031600
Functional annotation ZR1 protein, putative, expressed
UniProt C5Y0W3 , A0A1Z5RPD2
Pfam PF13713 PF16457 PF01363 PF08381 PF00415
Panther DB PTHR22870 PTHR22870:SF177
NCBI CDD KOG1427; Uncharacterized conserved protein, contains RCC1 domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65920 : Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
RAP-DB (Rice) LOC_Os02g45980.1 : ZR1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a021562 , Zm00025a051992 , Zm00025a023697 , Zm00025a032343
Brachypodium KQJ84204 , KQJ84205 , KQJ84206 , KQK00808
Barley HORVU6Hr1G066460.21 , HORVU6Hr1G066460.20 , HORVU6Hr1G066460.23 , HORVU6Hr1G066460.22 , HORVU6Hr1G066460.25 , HORVU6Hr1G066460.24 , HORVU6Hr1G066460.27 , HORVU6Hr1G066460.26 , HORVU6Hr1G066460.29 , HORVU6Hr1G066460.28 , HORVU6Hr1G066460.36 , HORVU6Hr1G066460.37 , HORVU6Hr1G066460.34 , HORVU6Hr1G066460.35 , HORVU6Hr1G066460.32 , HORVU6Hr1G066460.33 , HORVU6Hr1G066460.30 , HORVU6Hr1G066460.31 , HORVU6Hr1G066460.38 , HORVU6Hr1G066460.39 , HORVU6Hr1G066460.18 , HORVU6Hr1G066460.19 , HORVU6Hr1G066460.14 , HORVU6Hr1G066460.16 , HORVU6Hr1G066460.17 , HORVU6Hr1G066460.10 , HORVU6Hr1G066460.11 , HORVU6Hr1G066460.12 , HORVU6Hr1G066460.13 , HORVU6Hr1G066460.6 , HORVU6Hr1G066460.7 , HORVU6Hr1G066460.4 , HORVU6Hr1G066460.5 , HORVU6Hr1G066460.2 , HORVU6Hr1G066460.3 , HORVU6Hr1G066460.1 , HORVU6Hr1G066460.8 , HORVU6Hr1G066460.9
Wheat TraesCS6D02G241800 , TraesCS6B02G288400 , TraesCS6A02G261000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G074400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
2 Sobic.002G208700 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
3 Sobic.006G279100 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.28 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
4 Sobic.007G149500 expressed protein -
5 Sobic.001G150100 - -
6 Sobic.003G068150 - -
7 Sobic.009G180900 disease resistance RPP13-like protein 1, putative, expressed -
8 Sobic.009G020600 NBS-LRR disease resistance protein, putative, expressed -
9 Sobic.006G165200 amino acid permease family protein, putative, expressed -
10 Sobic.010G042300 DTA2, putative, expressed -
11 Sobic.001G187900 disease resistance protein, putative, expressed -
12 Sobic.006G215650 - -
13 Sobic.004G091300 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.005G070951 - -
15 Sobic.002G086900 receptor kinase, putative, expressed -
16 Sobic.002G208900 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
17 Sobic.002G046150 - -
18 Sobic.007G137100 - -
19 Sobic.002G202350 - -
20 Sobic.005G187700 receptor kinase, putative, expressed -


Gene co-expression network
sample Sobic004G279400 Sobic004G279400 Sobic004G074400 Sobic004G074400 Sobic004G279400--Sobic004G074400 Sobic002G208700 Sobic002G208700 Sobic004G279400--Sobic002G208700 Sobic006G279100 Sobic006G279100 Sobic004G279400--Sobic006G279100 Sobic007G149500 Sobic007G149500 Sobic004G279400--Sobic007G149500 Sobic001G150100 Sobic001G150100 Sobic004G279400--Sobic001G150100 Sobic003G068150 Sobic003G068150 Sobic004G279400--Sobic003G068150 Sobic009G180900 Sobic009G180900 Sobic004G279400--Sobic009G180900 Sobic009G020600 Sobic009G020600 Sobic004G279400--Sobic009G020600 Sobic006G165200 Sobic006G165200 Sobic004G279400--Sobic006G165200 Sobic004G074400--Sobic009G180900 Sobic004G074400--Sobic004G279400 Sobic004G074400--Sobic003G068150 Sobic004G074400--Sobic002G208700 Sobic002G099932 Sobic002G099932 Sobic004G074400--Sobic002G099932 Sobic008G147600 Sobic008G147600 Sobic004G074400--Sobic008G147600 Sobic009G037500 Sobic009G037500 Sobic004G074400--Sobic009G037500 Sobic004G074400--Sobic007G149500 Sobic002G219100 Sobic002G219100 Sobic004G074400--Sobic002G219100 Sobic006G215650 Sobic006G215650 Sobic002G208700--Sobic006G215650 Sobic010G042300 Sobic010G042300 Sobic002G208700--Sobic010G042300 Sobic002G208700--Sobic006G279100 Sobic003G329300 Sobic003G329300 Sobic002G208700--Sobic003G329300 Sobic002G208700--Sobic007G149500 Sobic001G090700 Sobic001G090700 Sobic002G208700--Sobic001G090700 Sobic002G302800 Sobic002G302800 Sobic002G208700--Sobic002G302800 Sobic007G137100 Sobic007G137100 Sobic002G208700--Sobic007G137100 Sobic001G187900 Sobic001G187900 Sobic002G208700--Sobic001G187900 Sobic006G279100--Sobic010G042300 Sobic005G070951 Sobic005G070951 Sobic006G279100--Sobic005G070951 Sobic001G483001 Sobic001G483001 Sobic006G279100--Sobic001G483001 Sobic006G279100--Sobic001G090700 Sobic008G170800 Sobic008G170800 Sobic006G279100--Sobic008G170800 Sobic006G279100--Sobic002G208700 Sobic001G460900 Sobic001G460900 Sobic006G279100--Sobic001G460900 Sobic005G228650 Sobic005G228650 Sobic006G279100--Sobic005G228650 Sobic006G279100--Sobic001G150100 Sobic002G046150 Sobic002G046150 Sobic007G149500--Sobic002G046150 Sobic001G145550 Sobic001G145550 Sobic007G149500--Sobic001G145550 Sobic005G187700 Sobic005G187700 Sobic007G149500--Sobic005G187700 Sobic007G149500--Sobic002G208700 Sobic001G100300 Sobic001G100300 Sobic007G149500--Sobic001G100300 Sobic007G149500--Sobic001G187900 Sobic007G149500--Sobic009G037500 Sobic003G341900 Sobic003G341900 Sobic007G149500--Sobic003G341900 Sobic009G173700 Sobic009G173700 Sobic007G149500--Sobic009G173700 Sobic002G380150 Sobic002G380150 Sobic001G150100--Sobic002G380150 Sobic001G150100--Sobic006G279100 Sobic003G162600 Sobic003G162600 Sobic001G150100--Sobic003G162600 Sobic007G206400 Sobic007G206400 Sobic001G150100--Sobic007G206400 Sobic009G144400 Sobic009G144400 Sobic001G150100--Sobic009G144400 Sobic001G150100--Sobic006G215650 Sobic001G150100--Sobic001G483001 Sobic002G208900 Sobic002G208900 Sobic001G150100--Sobic002G208900 Sobic009G199750 Sobic009G199750 Sobic001G150100--Sobic009G199750 Sobic003G068150--Sobic004G074400 Sobic005G116700 Sobic005G116700 Sobic003G068150--Sobic005G116700 Sobic001G279800 Sobic001G279800 Sobic003G068150--Sobic001G279800 Sobic003G068200 Sobic003G068200 Sobic003G068150--Sobic003G068200 Sobic003G068150--Sobic004G279400 Sobic003G068150--Sobic009G037500 Sobic003G068150--Sobic005G187700 Sobic005G150700 Sobic005G150700 Sobic003G068150--Sobic005G150700 Sobic010G055900 Sobic010G055900 Sobic003G068150--Sobic010G055900 Sobic009G180900--Sobic004G074400 Sobic006G027800 Sobic006G027800 Sobic009G180900--Sobic006G027800 Sobic004G347833 Sobic004G347833 Sobic009G180900--Sobic004G347833 Sobic009G180900--Sobic008G147600 Sobic009G180900--Sobic004G279400 Sobic009G180900--Sobic002G219100 Sobic009G180900--Sobic005G150700 Sobic009G218450 Sobic009G218450 Sobic009G180900--Sobic009G218450 Sobic010G175100 Sobic010G175100 Sobic009G180900--Sobic010G175100 Sobic004G305733 Sobic004G305733 Sobic009G020600--Sobic004G305733 Sobic001G455466 Sobic001G455466 Sobic009G020600--Sobic001G455466 Sobic009G020600--Sobic009G037500 Sobic009G020600--Sobic001G145550 Sobic009G030501 Sobic009G030501 Sobic009G020600--Sobic009G030501 Sobic009G020600--Sobic007G149500 Sobic009G020600--Sobic004G279400 Sobic009G020600--Sobic005G187700 Sobic008G165500 Sobic008G165500 Sobic009G020600--Sobic008G165500 Sobic006G165200--Sobic005G187700 Sobic003G301050 Sobic003G301050 Sobic006G165200--Sobic003G301050 Sobic006G165200--Sobic007G149500 Sobic006G165200--Sobic009G173700 Sobic006G165200--Sobic003G341900 Sobic006G165200--Sobic004G279400 Sobic003G072000 Sobic003G072000 Sobic006G165200--Sobic003G072000 Sobic006G165200--Sobic008G147600 Sobic006G165200--Sobic003G068150
Octagon: transcription factors


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