Gene annotation
Transcriptome id Sobic.009G181900.4,Sobic.009G181900.1,Sobic.009G181900.2,Sobic.009G181900.3
Synonym NF-YC11, Nuclear Factor Y, SbNF-YC14, Sb09g024220
Functional annotation tentative name (PubMedID : 31536532)
histone-like transcription factor and archaeal histone, putative, expressed
UniProt C5Z0A2 , A0A1Z5R463
Pfam PF00808
Panther DB PTHR10252 PTHR10252:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12480 : nuclear factor Y, subunit C11
RAP-DB (Rice) LOC_Os05g41450.1 : histone-like transcription factor and archaeal histone, putative, expressed
MaizeGDB (Corn) Zm00025a044085
Brachypodium KQK05632
Barley HORVU1Hr1G067880.1 , HORVU1Hr1G067990.2 , HORVU1Hr1G067990.1
Wheat TraesCS1B02G322000 , TraesCS1A02G310700 , TraesCS1D02G310200
Populus -


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cDNA sequences
Sobic.009G181900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G399000 expressed protein -
2 Sobic.007G114650 - -
3 Sobic.009G112500 lipase, putative, expressed -
4 Sobic.003G440500 YGGT family protein, putative, expressed K02221: YggT family protein
5 Sobic.003G262500 OsPOP3 - Putative Prolyl Oligopeptidase homologue, expressed -
6 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
7 Sobic.001G410300 - -
8 Sobic.010G278400 coiled-coil domain-containing protein 12, putative, expressed K12871: coiled-coil domain-containing protein 12
9 Sobic.001G350300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.006G170800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00025: malate dehydrogenase
11 Sobic.002G387000 expressed protein -
12 Sobic.003G017300 CTP synthase, putative, expressed K01937: pyrG, CTP synthase
13 Sobic.010G242000 phytosulfokine receptor precursor, putative, expressed -
14 Sobic.007G189900 membrane associated DUF588 domain containing protein, putative, expressed -
15 Sobic.001G087500 - -
16 Sobic.004G202750 - -
17 Sobic.009G211600 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
18 Sobic.004G305300 - -
19 Sobic.010G118401 - -
20 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic009G181900 Sobic009G181900 Sobic002G399000 Sobic002G399000 Sobic009G181900--Sobic002G399000 Sobic007G114650 Sobic007G114650 Sobic009G181900--Sobic007G114650 Sobic009G112500 Sobic009G112500 Sobic009G181900--Sobic009G112500 Sobic003G440500 Sobic003G440500 Sobic009G181900--Sobic003G440500 Sobic003G262500 Sobic003G262500 Sobic009G181900--Sobic003G262500 Sobic005G025400 Sobic005G025400 Sobic009G181900--Sobic005G025400 Sobic001G410300 Sobic001G410300 Sobic009G181900--Sobic001G410300 Sobic010G278400 Sobic010G278400 Sobic009G181900--Sobic010G278400 Sobic001G350300 Sobic001G350300 Sobic009G181900--Sobic001G350300 Sobic002G399000--Sobic001G350300 Sobic004G350600 Sobic004G350600 Sobic002G399000--Sobic004G350600 Sobic001G104100 Sobic001G104100 Sobic002G399000--Sobic001G104100 Sobic001G191300 Sobic001G191300 Sobic002G399000--Sobic001G191300 Sobic006G170800 Sobic006G170800 Sobic002G399000--Sobic006G170800 Sobic004G202750 Sobic004G202750 Sobic002G399000--Sobic004G202750 Sobic004G305300 Sobic004G305300 Sobic002G399000--Sobic004G305300 Sobic003G118500 Sobic003G118500 Sobic002G399000--Sobic003G118500 Sobic002G399000--Sobic005G025400 Sobic007G114650--Sobic010G278400 Sobic010G242000 Sobic010G242000 Sobic007G114650--Sobic010G242000 Sobic008G134500 Sobic008G134500 Sobic007G114650--Sobic008G134500 Sobic007G114650--Sobic009G181900 Sobic007G114650--Sobic005G025400 Sobic003G250340 Sobic003G250340 Sobic007G114650--Sobic003G250340 Sobic007G114650--Sobic003G440500 Sobic003G130650 Sobic003G130650 Sobic007G114650--Sobic003G130650 Sobic001G087500 Sobic001G087500 Sobic007G114650--Sobic001G087500 Sobic010G118401 Sobic010G118401 Sobic009G112500--Sobic010G118401 Sobic004G327200 Sobic004G327200 Sobic009G112500--Sobic004G327200 Sobic009G112500--Sobic002G399000 Sobic009G112500--Sobic009G181900 Sobic002G387000 Sobic002G387000 Sobic009G112500--Sobic002G387000 Sobic006G249600 Sobic006G249600 Sobic009G112500--Sobic006G249600 Sobic005G014400 Sobic005G014400 Sobic009G112500--Sobic005G014400 Sobic003G251900 Sobic003G251900 Sobic009G112500--Sobic003G251900 Sobic009G112500--Sobic005G025400 Sobic010G249600 Sobic010G249600 Sobic003G440500--Sobic010G249600 Sobic002G377400 Sobic002G377400 Sobic003G440500--Sobic002G377400 Sobic009G223900 Sobic009G223900 Sobic003G440500--Sobic009G223900 Sobic003G440500--Sobic005G025400 Sobic007G185000 Sobic007G185000 Sobic003G440500--Sobic007G185000 Sobic003G440500--Sobic010G242000 Sobic003G308900 Sobic003G308900 Sobic003G440500--Sobic003G308900 Sobic003G440500--Sobic002G399000 Sobic003G440500--Sobic009G181900 Sobic006G082100 Sobic006G082100 Sobic003G262500--Sobic006G082100 Sobic003G262500--Sobic009G181900 Sobic003G262500--Sobic009G112500 Sobic003G262500--Sobic002G377400 Sobic003G262500--Sobic010G249600 Sobic010G105900 Sobic010G105900 Sobic003G262500--Sobic010G105900 Sobic003G262500--Sobic006G249600 Sobic003G262500--Sobic002G387000 Sobic002G398600 Sobic002G398600 Sobic003G262500--Sobic002G398600 Sobic005G025400--Sobic010G242000 Sobic005G025400--Sobic003G440500 Sobic005G025400--Sobic002G399000 Sobic005G025400--Sobic006G170800 Sobic005G025400--Sobic001G350300 Sobic005G025400--Sobic009G223900 Sobic002G085600 Sobic002G085600 Sobic005G025400--Sobic002G085600 Sobic005G025400--Sobic004G202750 Sobic001G350800 Sobic001G350800 Sobic005G025400--Sobic001G350800 Sobic010G043700 Sobic010G043700 Sobic001G410300--Sobic010G043700 Sobic001G410300--Sobic009G181900 Sobic003G139100 Sobic003G139100 Sobic001G410300--Sobic003G139100 Sobic003G017300 Sobic003G017300 Sobic001G410300--Sobic003G017300 Sobic001G341900 Sobic001G341900 Sobic001G410300--Sobic001G341900 Sobic009G149600 Sobic009G149600 Sobic001G410300--Sobic009G149600 Sobic004G224100 Sobic004G224100 Sobic001G410300--Sobic004G224100 Sobic004G337700 Sobic004G337700 Sobic001G410300--Sobic004G337700 Sobic007G189900 Sobic007G189900 Sobic001G410300--Sobic007G189900 Sobic006G260101 Sobic006G260101 Sobic010G278400--Sobic006G260101 Sobic010G278400--Sobic007G114650 Sobic010G278400--Sobic001G087500 Sobic010G278400--Sobic004G202750 Sobic005G145700 Sobic005G145700 Sobic010G278400--Sobic005G145700 Sobic010G278400--Sobic006G170800 Sobic010G278400--Sobic009G181900 Sobic010G278400--Sobic010G118401 Sobic009G187900 Sobic009G187900 Sobic010G278400--Sobic009G187900 Sobic001G350300--Sobic006G170800 Sobic001G350300--Sobic004G305300 Sobic001G350300--Sobic002G399000 Sobic001G350300--Sobic004G350600 Sobic001G350300--Sobic001G191300 Sobic001G350300--Sobic001G104100 Sobic002G320700 Sobic002G320700 Sobic001G350300--Sobic002G320700 Sobic001G350300--Sobic003G118500 Sobic001G113400 Sobic001G113400 Sobic001G350300--Sobic001G113400
Octagon: transcription factors


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