Gene annotation
Transcriptome id Sobic.009G211600.2,Sobic.009G211600.5,Sobic.009G211600.4,Sobic.009G211600.3,Sobic.009G211600.1
Synonym Sb09g026720
Functional annotation endonuclease/exonuclease/phosphatase family domain containing protein, expressed
UniProt A0A1B6P9S6 , A0A1B6P9P6 , A0A1Z5R3J3 , A0A1Z5R4J7 , A0A1Z5R4Q4
Pfam PF03372
Panther DB PTHR11200 PTHR11200:SF139
NCBI CDD KOG0565; Inositol polyphosphate 5-phosphatase and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71710 : DNAse I-like superfamily protein
RAP-DB (Rice) LOC_Os01g51890.1 : endonuclease/exonuclease/phosphatase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044359
Brachypodium PNT70818 , PNT70819 , KQK05200 , KQK05201 , KQK05202 , KQK05203
Barley -
Wheat -
Populus PNT24868


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cDNA sequences
Sobic.009G211600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G096200 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
2 Sobic.001G213300 cytochrome P450, putative, expressed K15402: fatty acid omega-hydroxylase
3 Sobic.002G399000 expressed protein -
4 Sobic.004G231501 - -
5 Sobic.006G243000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCB4, putative, expressed -
6 Sobic.009G181900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
7 Sobic.001G341900 domain of unknown function domain containing protein, expressed -
8 Sobic.001G140101 - -
9 Sobic.001G028500 expressed protein -
10 Sobic.007G061500 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
11 Sobic.001G071700 protein kinase family protein, putative, expressed -
12 Sobic.004G310400 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
13 Sobic.001G507700 - -
14 Sobic.004G202750 - -
15 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
16 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.009G223900 protein binding protein, putative, expressed -
18 Sobic.004G026000 ankyrin repeat domain-containing protein, chloroplast precursor, putative, expressed -
19 Sobic.004G350600 AMP-binding domain containing protein, expressed -
20 Sobic.005G025400 CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic009G211600 Sobic009G211600 Sobic001G096200 Sobic001G096200 Sobic009G211600--Sobic001G096200 Sobic001G213300 Sobic001G213300 Sobic009G211600--Sobic001G213300 Sobic002G399000 Sobic002G399000 Sobic009G211600--Sobic002G399000 Sobic004G231501 Sobic004G231501 Sobic009G211600--Sobic004G231501 Sobic006G243000 Sobic006G243000 Sobic009G211600--Sobic006G243000 Sobic009G181900 Sobic009G181900 Sobic009G211600--Sobic009G181900 Sobic001G341900 Sobic001G341900 Sobic009G211600--Sobic001G341900 Sobic001G140101 Sobic001G140101 Sobic009G211600--Sobic001G140101 Sobic001G028500 Sobic001G028500 Sobic009G211600--Sobic001G028500 Sobic004G310400 Sobic004G310400 Sobic001G096200--Sobic004G310400 Sobic004G026000 Sobic004G026000 Sobic001G096200--Sobic004G026000 Sobic001G520000 Sobic001G520000 Sobic001G096200--Sobic001G520000 Sobic004G314100 Sobic004G314100 Sobic001G096200--Sobic004G314100 Sobic003G155800 Sobic003G155800 Sobic001G096200--Sobic003G155800 Sobic001G096200--Sobic006G243000 Sobic003G118500 Sobic003G118500 Sobic001G096200--Sobic003G118500 Sobic003G253700 Sobic003G253700 Sobic001G096200--Sobic003G253700 Sobic001G096200--Sobic004G231501 Sobic001G213300--Sobic003G253700 Sobic001G213300--Sobic001G096200 Sobic006G213350 Sobic006G213350 Sobic001G213300--Sobic006G213350 Sobic001G213300--Sobic001G520000 Sobic003G365200 Sobic003G365200 Sobic001G213300--Sobic003G365200 Sobic001G212900 Sobic001G212900 Sobic001G213300--Sobic001G212900 Sobic004G315400 Sobic004G315400 Sobic001G213300--Sobic004G315400 Sobic006G134300 Sobic006G134300 Sobic001G213300--Sobic006G134300 Sobic003G155000 Sobic003G155000 Sobic001G213300--Sobic003G155000 Sobic001G350300 Sobic001G350300 Sobic002G399000--Sobic001G350300 Sobic004G350600 Sobic004G350600 Sobic002G399000--Sobic004G350600 Sobic001G104100 Sobic001G104100 Sobic002G399000--Sobic001G104100 Sobic001G191300 Sobic001G191300 Sobic002G399000--Sobic001G191300 Sobic006G170800 Sobic006G170800 Sobic002G399000--Sobic006G170800 Sobic004G202750 Sobic004G202750 Sobic002G399000--Sobic004G202750 Sobic004G305300 Sobic004G305300 Sobic002G399000--Sobic004G305300 Sobic002G399000--Sobic003G118500 Sobic005G025400 Sobic005G025400 Sobic002G399000--Sobic005G025400 Sobic004G231501--Sobic001G028500 Sobic007G061500 Sobic007G061500 Sobic004G231501--Sobic007G061500 Sobic004G231501--Sobic004G314100 Sobic003G106100 Sobic003G106100 Sobic004G231501--Sobic003G106100 Sobic009G004500 Sobic009G004500 Sobic004G231501--Sobic009G004500 Sobic007G017300 Sobic007G017300 Sobic004G231501--Sobic007G017300 Sobic004G231501--Sobic004G202750 Sobic001G483200 Sobic001G483200 Sobic004G231501--Sobic001G483200 Sobic001G368000 Sobic001G368000 Sobic004G231501--Sobic001G368000 Sobic008G143901 Sobic008G143901 Sobic006G243000--Sobic008G143901 Sobic006G243000--Sobic001G096200 Sobic006G243000--Sobic006G213350 Sobic002G395900 Sobic002G395900 Sobic006G243000--Sobic002G395900 Sobic001G483001 Sobic001G483001 Sobic006G243000--Sobic001G483001 Sobic006G243000--Sobic001G520000 Sobic006G243000--Sobic004G026000 Sobic009G045100 Sobic009G045100 Sobic006G243000--Sobic009G045100 Sobic001G018550 Sobic001G018550 Sobic006G243000--Sobic001G018550 Sobic009G181900--Sobic002G399000 Sobic007G114650 Sobic007G114650 Sobic009G181900--Sobic007G114650 Sobic009G112500 Sobic009G112500 Sobic009G181900--Sobic009G112500 Sobic003G440500 Sobic003G440500 Sobic009G181900--Sobic003G440500 Sobic003G262500 Sobic003G262500 Sobic009G181900--Sobic003G262500 Sobic009G181900--Sobic005G025400 Sobic001G410300 Sobic001G410300 Sobic009G181900--Sobic001G410300 Sobic010G278400 Sobic010G278400 Sobic009G181900--Sobic010G278400 Sobic009G181900--Sobic001G350300 Sobic003G093500 Sobic003G093500 Sobic001G341900--Sobic003G093500 Sobic001G341900--Sobic007G061500 Sobic001G341900--Sobic009G004500 Sobic004G224100 Sobic004G224100 Sobic001G341900--Sobic004G224100 Sobic004G337700 Sobic004G337700 Sobic001G341900--Sobic004G337700 Sobic008G192800 Sobic008G192800 Sobic001G341900--Sobic008G192800 Sobic001G341900--Sobic009G045100 Sobic001G341900--Sobic001G368000 Sobic009G114900 Sobic009G114900 Sobic001G341900--Sobic009G114900 Sobic001G140101--Sobic004G350600 Sobic005G063600 Sobic005G063600 Sobic001G140101--Sobic005G063600 Sobic001G140101--Sobic002G399000 Sobic009G223900 Sobic009G223900 Sobic001G140101--Sobic009G223900 Sobic008G151900 Sobic008G151900 Sobic001G140101--Sobic008G151900 Sobic001G140101--Sobic003G155800 Sobic009G149600 Sobic009G149600 Sobic001G140101--Sobic009G149600 Sobic006G169600 Sobic006G169600 Sobic001G140101--Sobic006G169600 Sobic001G140101--Sobic001G028500 Sobic001G028500--Sobic004G231501 Sobic001G028500--Sobic007G061500 Sobic001G028500--Sobic009G004500 Sobic001G028500--Sobic003G106100 Sobic001G028500--Sobic004G202750 Sobic001G028500--Sobic004G314100 Sobic001G028500--Sobic007G017300 Sobic001G028500--Sobic001G483200 Sobic001G060200 Sobic001G060200 Sobic001G028500--Sobic001G060200
Octagon: transcription factors


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