Gene annotation
Transcriptome id Sobic.009G080000.1,Sobic.009G080000.3,Sobic.009G080000.2,Sobic.009G080000.4,Sobic.009G080000.5
Synonym Sb09g006690
Functional annotation OsSPL15 - SBP-box gene family member, expressed
UniProt A0A1B6P7F6
Pfam -
Panther DB PTHR31251 PTHR31251:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G76580 : Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
RAP-DB (Rice) LOC_Os08g40260.1 : OsSPL15 - SBP-box gene family member, expressed
MaizeGDB (Corn) Zm00025a005131 , Zm00025a033821
Brachypodium KQJ98959
Barley HORVU7Hr1G051400.7 , HORVU7Hr1G051400.3 , HORVU7Hr1G051400.2 , HORVU7Hr1G051400.8
Wheat TraesCS7A02G249100 , TraesCS7A02G249100 , TraesCS7A02G249100 , TraesCS7A02G249100 , TraesCS7D02G248000 , TraesCS7D02G248000 , TraesCS7D02G248000 , TraesCS7B02G142200 , TraesCS7B02G142200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G327200 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
2 Sobic.003G253700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
4 Sobic.003G155000 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
5 Sobic.002G187900 expressed protein -
6 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
7 Sobic.003G262600 OsWAK10d - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
8 Sobic.006G134300 - -
9 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
10 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
11 Sobic.003G139100 - -
12 Sobic.002G209450 - -
13 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
14 Sobic.004G082600 OsFBX126 - F-box domain containing protein, expressed -
15 Sobic.009G223900 protein binding protein, putative, expressed -
16 Sobic.009G094200 - -
17 Sobic.009G112500 lipase, putative, expressed -
18 Sobic.003G298000 - -
19 Sobic.009G215350 - -
20 Sobic.003G365200 expressed protein -


Gene co-expression network
sample Sobic009G080000 Sobic009G080000 Sobic004G327200 Sobic004G327200 Sobic009G080000--Sobic004G327200 Sobic003G253700 Sobic003G253700 Sobic009G080000--Sobic003G253700 Sobic006G249600 Sobic006G249600 Sobic009G080000--Sobic006G249600 Sobic003G155000 Sobic003G155000 Sobic009G080000--Sobic003G155000 Sobic002G187900 Sobic002G187900 Sobic009G080000--Sobic002G187900 Sobic008G142200 Sobic008G142200 Sobic009G080000--Sobic008G142200 Sobic003G262600 Sobic003G262600 Sobic009G080000--Sobic003G262600 Sobic006G134300 Sobic006G134300 Sobic009G080000--Sobic006G134300 Sobic003G263900 Sobic003G263900 Sobic009G080000--Sobic003G263900 Sobic004G327200--Sobic009G080000 Sobic004G327200--Sobic003G253700 Sobic004G327200--Sobic006G249600 Sobic004G327200--Sobic003G155000 Sobic002G209450 Sobic002G209450 Sobic004G327200--Sobic002G209450 Sobic009G223900 Sobic009G223900 Sobic004G327200--Sobic009G223900 Sobic002G413800 Sobic002G413800 Sobic004G327200--Sobic002G413800 Sobic002G398600 Sobic002G398600 Sobic004G327200--Sobic002G398600 Sobic009G112500 Sobic009G112500 Sobic004G327200--Sobic009G112500 Sobic003G253700--Sobic003G155000 Sobic001G520000 Sobic001G520000 Sobic003G253700--Sobic001G520000 Sobic003G365200 Sobic003G365200 Sobic003G253700--Sobic003G365200 Sobic010G012200 Sobic010G012200 Sobic003G253700--Sobic010G012200 Sobic003G253700--Sobic006G249600 Sobic006G157450 Sobic006G157450 Sobic003G253700--Sobic006G157450 Sobic003G155800 Sobic003G155800 Sobic003G253700--Sobic003G155800 Sobic008G170800 Sobic008G170800 Sobic003G253700--Sobic008G170800 Sobic003G253700--Sobic003G262600 Sobic001G212900 Sobic001G212900 Sobic006G249600--Sobic001G212900 Sobic006G249600--Sobic002G398600 Sobic006G249600--Sobic002G187900 Sobic006G249600--Sobic003G253700 Sobic006G249600--Sobic003G155000 Sobic006G249600--Sobic003G263900 Sobic001G109400 Sobic001G109400 Sobic006G249600--Sobic001G109400 Sobic004G173200 Sobic004G173200 Sobic006G249600--Sobic004G173200 Sobic006G249600--Sobic006G157450 Sobic003G155000--Sobic003G253700 Sobic003G155000--Sobic001G520000 Sobic003G155000--Sobic010G012200 Sobic003G155000--Sobic003G365200 Sobic003G155000--Sobic003G262600 Sobic005G048800 Sobic005G048800 Sobic003G155000--Sobic005G048800 Sobic003G155000--Sobic006G249600 Sobic003G155000--Sobic008G170800 Sobic003G155000--Sobic006G157450 Sobic002G187900--Sobic003G263900 Sobic006G255200 Sobic006G255200 Sobic002G187900--Sobic006G255200 Sobic004G127600 Sobic004G127600 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic004G227700 Sobic004G227700 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic008G142200--Sobic004G227700 Sobic001G191500 Sobic001G191500 Sobic008G142200--Sobic001G191500 Sobic009G094200 Sobic009G094200 Sobic008G142200--Sobic009G094200 Sobic008G190600 Sobic008G190600 Sobic008G142200--Sobic008G190600 Sobic008G142200--Sobic003G263900 Sobic004G033650 Sobic004G033650 Sobic008G142200--Sobic004G033650 Sobic009G026700 Sobic009G026700 Sobic008G142200--Sobic009G026700 Sobic001G038700 Sobic001G038700 Sobic008G142200--Sobic001G038700 Sobic008G072800 Sobic008G072800 Sobic008G142200--Sobic008G072800 Sobic003G262600--Sobic003G155000 Sobic003G262600--Sobic004G173200 Sobic003G262600--Sobic003G253700 Sobic003G262600--Sobic006G249600 Sobic010G000200 Sobic010G000200 Sobic003G262600--Sobic010G000200 Sobic003G262600--Sobic002G187900 Sobic003G262600--Sobic003G365200 Sobic003G262600--Sobic009G223900 Sobic003G362800 Sobic003G362800 Sobic003G262600--Sobic003G362800 Sobic006G134300--Sobic002G187900 Sobic006G134300--Sobic006G249600 Sobic006G134300--Sobic004G227700 Sobic006G134300--Sobic003G155000 Sobic006G134300--Sobic003G253700 Sobic006G134300--Sobic003G263900 Sobic006G134300--Sobic003G365200 Sobic006G134300--Sobic004G127600 Sobic006G134300--Sobic001G212900 Sobic003G263900--Sobic002G187900 Sobic003G263900--Sobic001G038700 Sobic003G263900--Sobic006G255200 Sobic003G263900--Sobic008G142200 Sobic003G263900--Sobic004G127600 Sobic003G263900--Sobic002G398600 Sobic003G263900--Sobic006G249600 Sobic003G263900--Sobic004G227700 Sobic004G072201 Sobic004G072201 Sobic003G263900--Sobic004G072201
Octagon: transcription factors


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