Gene annotation
Transcriptome id Sobic.004G093700.1
Synonym TET2, Sb04g007710
Functional annotation tetraspanin family protein, putative, expressed
UniProt C5XY38
Pfam PF00335
Panther DB PTHR32191 PTHR32191:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G19580 : tetraspanin2
RAP-DB (Rice) LOC_Os02g12750.1 : tetraspanin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a020187
Brachypodium KQJ94050
Barley HORVU7Hr1G086670.4 , HORVU7Hr1G086670.7 , HORVU7Hr1G086670.2 , HORVU7Hr1G086670.3 , HORVU6Hr1G039610.1 , HORVU6Hr1G039610.3 , HORVU6Hr1G039610.2 , HORVU6Hr1G039610.4
Wheat TraesCS6D02G172600 , TraesCS6B02G214400 , TraesCS6A02G185600 , TraesCS6B02G214300 , TraesCS6B02G214500
Populus -


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cDNA sequences
Sobic.004G093700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G100700 HEAT repeat family protein, putative, expressed -
2 Sobic.003G063400 glycosyltransferase family 43 protein, putative, expressed -
3 Sobic.009G026600 - -
4 Sobic.008G072800 OsMADS33 - MADS-box family gene with MIKCc type-box, expressed -
5 Sobic.007G183600 expressed protein -
6 Sobic.004G250400 aluminum-activated malate transporter, putative, expressed -
7 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
8 Sobic.007G141900 resistance protein SlVe1 precursor, putative, expressed -
9 Sobic.002G324801 - -
10 Sobic.009G094200 - -
11 Sobic.009G074800 - -
12 Sobic.004G227700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase, putative, expressed -
13 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
14 Sobic.008G190600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, putative, expressed K07007: 3-dehydro-bile acid Delta4,6-reductase
15 Sobic.005G027350 - -
16 Sobic.004G033650 - -
17 Sobic.006G045601 - -
18 Sobic.008G132500 pleiotropic drug resistance protein 15, putative, expressed -
19 Sobic.001G001800 expressed protein -
20 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G093700 Sobic004G093700 Sobic010G100700 Sobic010G100700 Sobic004G093700--Sobic010G100700 Sobic003G063400 Sobic003G063400 Sobic004G093700--Sobic003G063400 Sobic009G026600 Sobic009G026600 Sobic004G093700--Sobic009G026600 Sobic008G072800 Sobic008G072800 Sobic004G093700--Sobic008G072800 Sobic007G183600 Sobic007G183600 Sobic004G093700--Sobic007G183600 Sobic004G250400 Sobic004G250400 Sobic004G093700--Sobic004G250400 Sobic008G142200 Sobic008G142200 Sobic004G093700--Sobic008G142200 Sobic007G141900 Sobic007G141900 Sobic004G093700--Sobic007G141900 Sobic002G324801 Sobic002G324801 Sobic004G093700--Sobic002G324801 Sobic010G100700--Sobic004G093700 Sobic010G100700--Sobic008G072800 Sobic003G023450 Sobic003G023450 Sobic010G100700--Sobic003G023450 Sobic010G100700--Sobic007G141900 Sobic010G100700--Sobic008G142200 Sobic010G100700--Sobic003G063400 Sobic010G100700--Sobic002G324801 Sobic002G012100 Sobic002G012100 Sobic010G100700--Sobic002G012100 Sobic008G132500 Sobic008G132500 Sobic010G100700--Sobic008G132500 Sobic003G063400--Sobic004G250400 Sobic003G063400--Sobic009G026600 Sobic003G063400--Sobic004G093700 Sobic010G012200 Sobic010G012200 Sobic003G063400--Sobic010G012200 Sobic004G227700 Sobic004G227700 Sobic003G063400--Sobic004G227700 Sobic003G263900 Sobic003G263900 Sobic003G063400--Sobic003G263900 Sobic003G063400--Sobic007G183600 Sobic003G063400--Sobic010G100700 Sobic003G063400--Sobic008G142200 Sobic001G370800 Sobic001G370800 Sobic009G026600--Sobic001G370800 Sobic009G026600--Sobic003G063400 Sobic005G027350 Sobic005G027350 Sobic009G026600--Sobic005G027350 Sobic001G038700 Sobic001G038700 Sobic009G026600--Sobic001G038700 Sobic009G026600--Sobic004G250400 Sobic001G001800 Sobic001G001800 Sobic009G026600--Sobic001G001800 Sobic008G037300 Sobic008G037300 Sobic009G026600--Sobic008G037300 Sobic002G309300 Sobic002G309300 Sobic009G026600--Sobic002G309300 Sobic009G026600--Sobic010G012200 Sobic008G072800--Sobic007G141900 Sobic008G072800--Sobic010G100700 Sobic008G072800--Sobic008G142200 Sobic006G072701 Sobic006G072701 Sobic008G072800--Sobic006G072701 Sobic008G072800--Sobic002G012100 Sobic008G072800--Sobic003G023450 Sobic008G072800--Sobic002G324801 Sobic008G072800--Sobic008G132500 Sobic001G191500 Sobic001G191500 Sobic008G072800--Sobic001G191500 Sobic003G069601 Sobic003G069601 Sobic007G183600--Sobic003G069601 Sobic004G072201 Sobic004G072201 Sobic007G183600--Sobic004G072201 Sobic002G374000 Sobic002G374000 Sobic007G183600--Sobic002G374000 Sobic007G183600--Sobic004G093700 Sobic004G068600 Sobic004G068600 Sobic007G183600--Sobic004G068600 Sobic001G383200 Sobic001G383200 Sobic007G183600--Sobic001G383200 Sobic007G183600--Sobic003G063400 Sobic001G442000 Sobic001G442000 Sobic007G183600--Sobic001G442000 Sobic007G183600--Sobic009G026600 Sobic004G250400--Sobic003G063400 Sobic004G250400--Sobic009G026600 Sobic004G250400--Sobic004G227700 Sobic004G250400--Sobic001G370800 Sobic004G250400--Sobic004G093700 Sobic004G058400 Sobic004G058400 Sobic004G250400--Sobic004G058400 Sobic004G082600 Sobic004G082600 Sobic004G250400--Sobic004G082600 Sobic004G250400--Sobic010G012200 Sobic006G268900 Sobic006G268900 Sobic004G250400--Sobic006G268900 Sobic008G142200--Sobic004G227700 Sobic008G142200--Sobic001G191500 Sobic009G094200 Sobic009G094200 Sobic008G142200--Sobic009G094200 Sobic008G190600 Sobic008G190600 Sobic008G142200--Sobic008G190600 Sobic008G142200--Sobic003G263900 Sobic004G033650 Sobic004G033650 Sobic008G142200--Sobic004G033650 Sobic009G026700 Sobic009G026700 Sobic008G142200--Sobic009G026700 Sobic008G142200--Sobic001G038700 Sobic008G142200--Sobic008G072800 Sobic007G141900--Sobic008G072800 Sobic007G141900--Sobic002G012100 Sobic002G009000 Sobic002G009000 Sobic007G141900--Sobic002G009000 Sobic007G141900--Sobic008G132500 Sobic010G196466 Sobic010G196466 Sobic007G141900--Sobic010G196466 Sobic007G141900--Sobic010G100700 Sobic007G141900--Sobic006G072701 Sobic007G141900--Sobic004G033650 Sobic008G083100 Sobic008G083100 Sobic007G141900--Sobic008G083100 Sobic002G324801--Sobic008G072800 Sobic003G016950 Sobic003G016950 Sobic002G324801--Sobic003G016950 Sobic002G324801--Sobic008G132500 Sobic002G324801--Sobic004G093700 Sobic003G375500 Sobic003G375500 Sobic002G324801--Sobic003G375500 Sobic002G324801--Sobic010G100700 Sobic002G324801--Sobic007G141900 Sobic001G250750 Sobic001G250750 Sobic002G324801--Sobic001G250750 Sobic002G324801--Sobic010G196466
Octagon: transcription factors


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