Gene annotation
Transcriptome id Sobic.002G284901.1
Synonym -
Functional annotation -
UniProt C5X720
Pfam PF02519
Panther DB PTHR31175 PTHR31175:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G29500 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g37470.1 : OsSAUR52 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a047989 , Zm00025a014497 , Zm00025a014495
Brachypodium -
Barley HORVU5Hr1G017100.1 , HORVU5Hr1G086320.4 , HORVU5Hr1G086320.1 , HORVU5Hr1G086320.2 , HORVU5Hr1G086320.3 , HORVU5Hr1G086320.10 , HORVU5Hr1G017220.1
Wheat TraesCS5D02G349100 , TraesCS5B02G346100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
2 Sobic.003G200501 - K11252: histone H2B
3 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
4 Sobic.003G120400 expressed protein -
5 Sobic.001G525000 polygalacturonase, putative, expressed -
6 Sobic.007G093400 - -
7 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
8 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
9 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
10 Sobic.003G367401 - -
11 Sobic.001G130900 expressed protein -
12 Sobic.002G387100 X8 domain containing protein, expressed -
13 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
14 Sobic.010G201000 - -
15 Sobic.001G460800 nucleotidyltransferase, putative, expressed -
16 Sobic.003G065001 - -
17 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
18 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
19 Sobic.010G074980 - -
20 Sobic.007G224600 - -


Gene co-expression network
sample Sobic002G284901 Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic002G284901--Sobic002G320900 Sobic003G200501 Sobic003G200501 Sobic002G284901--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic002G284901--Sobic002G210200 Sobic003G120400 Sobic003G120400 Sobic002G284901--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic002G284901--Sobic001G525000 Sobic007G093400 Sobic007G093400 Sobic002G284901--Sobic007G093400 Sobic006G065700 Sobic006G065700 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G430200 Sobic002G430200 Sobic002G284901--Sobic002G430200 Sobic002G320900--Sobic002G284901 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic003G367401 Sobic003G367401 Sobic002G320900--Sobic003G367401 Sobic003G200501--Sobic002G210200 Sobic003G200501--Sobic003G067500 Sobic003G200501--Sobic002G284901 Sobic003G200501--Sobic002G320900 Sobic003G200501--Sobic003G120400 Sobic003G200501--Sobic001G525000 Sobic003G067300 Sobic003G067300 Sobic003G200501--Sobic003G067300 Sobic007G221800 Sobic007G221800 Sobic003G200501--Sobic007G221800 Sobic003G200501--Sobic007G093400 Sobic002G210200--Sobic003G200501 Sobic002G210200--Sobic003G067500 Sobic002G210200--Sobic002G320900 Sobic002G210200--Sobic002G284901 Sobic002G210200--Sobic001G525000 Sobic002G210200--Sobic003G120400 Sobic002G210200--Sobic007G093400 Sobic002G210200--Sobic003G067300 Sobic002G210200--Sobic007G221800 Sobic003G120400--Sobic001G525000 Sobic003G120400--Sobic002G320900 Sobic003G120400--Sobic007G093400 Sobic003G120400--Sobic002G284901 Sobic003G120400--Sobic003G200501 Sobic003G120400--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic003G120400--Sobic001G130900 Sobic003G120400--Sobic002G430200 Sobic003G120400--Sobic003G367401 Sobic001G525000--Sobic003G120400 Sobic001G525000--Sobic002G320900 Sobic001G525000--Sobic002G430200 Sobic001G525000--Sobic002G284901 Sobic001G525000--Sobic003G367401 Sobic002G387100 Sobic002G387100 Sobic001G525000--Sobic002G387100 Sobic001G525000--Sobic002G210200 Sobic001G525000--Sobic003G200501 Sobic001G525000--Sobic007G093400 Sobic007G093400--Sobic003G120400 Sobic007G093400--Sobic002G320900 Sobic007G093400--Sobic001G525000 Sobic010G201000 Sobic010G201000 Sobic007G093400--Sobic010G201000 Sobic007G093400--Sobic003G367401 Sobic003G065001 Sobic003G065001 Sobic007G093400--Sobic003G065001 Sobic007G093400--Sobic002G210200 Sobic007G093400--Sobic003G200501 Sobic010G074980 Sobic010G074980 Sobic007G093400--Sobic010G074980 Sobic006G065700--Sobic002G320900 Sobic006G065700--Sobic002G284901 Sobic006G065700--Sobic007G093400 Sobic006G065700--Sobic002G210200 Sobic006G065700--Sobic003G200501 Sobic006G065700--Sobic003G120400 Sobic006G065700--Sobic001G525000 Sobic006G065700--Sobic010G074980 Sobic003G427500 Sobic003G427500 Sobic006G065700--Sobic003G427500 Sobic003G067500--Sobic003G200501 Sobic003G067500--Sobic002G210200 Sobic003G067500--Sobic003G067300 Sobic003G067500--Sobic002G284901 Sobic003G067500--Sobic007G221800 Sobic003G067500--Sobic002G320900 Sobic004G265400 Sobic004G265400 Sobic003G067500--Sobic004G265400 Sobic003G067500--Sobic001G525000 Sobic003G067500--Sobic003G120400 Sobic002G430200--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic002G430200--Sobic007G122300 Sobic003G099500 Sobic003G099500 Sobic002G430200--Sobic003G099500 Sobic002G430200--Sobic003G367401 Sobic002G430200--Sobic001G525000 Sobic004G239000 Sobic004G239000 Sobic002G430200--Sobic004G239000 Sobic002G430200--Sobic003G120400 Sobic002G430200--Sobic010G201000 Sobic002G284800 Sobic002G284800 Sobic002G430200--Sobic002G284800
Octagon: transcription factors


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