Gene annotation
Transcriptome id Sobic.001G158000.1
Synonym Sb01g013770
Functional annotation selT/selW/selH selenoprotein domain containing protein, expressed
UniProt C5WR92
Pfam -
Panther DB PTHR33638 PTHR33638:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31360 : selenium binding
RAP-DB (Rice) LOC_Os11g47770.1 : selT/selW/selH selenoprotein domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054153
Brachypodium -
Barley -
Wheat TraesCS4D02G140700 , TraesCS1B02G136000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
2 Sobic.002G326050 - -
3 Sobic.004G265400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
4 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
5 Sobic.007G224600 - -
6 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
7 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
8 Sobic.003G200501 - K11252: histone H2B
9 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
10 Sobic.002G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.002G140100 expressed protein -
12 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
13 Sobic.010G158100 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.002G284901 - -
15 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
16 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
17 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
18 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
19 Sobic.002G403400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
20 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B


Gene co-expression network
sample Sobic001G158000 Sobic001G158000 Sobic007G221800 Sobic007G221800 Sobic001G158000--Sobic007G221800 Sobic002G326050 Sobic002G326050 Sobic001G158000--Sobic002G326050 Sobic004G265400 Sobic004G265400 Sobic001G158000--Sobic004G265400 Sobic001G519300 Sobic001G519300 Sobic001G158000--Sobic001G519300 Sobic007G224600 Sobic007G224600 Sobic001G158000--Sobic007G224600 Sobic007G149600 Sobic007G149600 Sobic001G158000--Sobic007G149600 Sobic003G067500 Sobic003G067500 Sobic001G158000--Sobic003G067500 Sobic003G200501 Sobic003G200501 Sobic001G158000--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic001G158000--Sobic002G210200 Sobic007G221800--Sobic007G149600 Sobic007G221800--Sobic003G200501 Sobic007G221800--Sobic002G210200 Sobic007G221800--Sobic004G265400 Sobic007G221800--Sobic003G067500 Sobic002G284901 Sobic002G284901 Sobic007G221800--Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic007G221800--Sobic002G320900 Sobic003G067300 Sobic003G067300 Sobic007G221800--Sobic003G067300 Sobic007G093400 Sobic007G093400 Sobic007G221800--Sobic007G093400 Sobic002G140100 Sobic002G140100 Sobic002G326050--Sobic002G140100 Sobic010G158100 Sobic010G158100 Sobic002G326050--Sobic010G158100 Sobic001G139600 Sobic001G139600 Sobic002G326050--Sobic001G139600 Sobic006G227800 Sobic006G227800 Sobic002G326050--Sobic006G227800 Sobic002G326050--Sobic001G158000 Sobic001G220200 Sobic001G220200 Sobic002G326050--Sobic001G220200 Sobic002G326050--Sobic001G519300 Sobic002G218200 Sobic002G218200 Sobic002G326050--Sobic002G218200 Sobic004G357033 Sobic004G357033 Sobic002G326050--Sobic004G357033 Sobic004G265400--Sobic007G149600 Sobic004G265400--Sobic007G221800 Sobic003G350100 Sobic003G350100 Sobic004G265400--Sobic003G350100 Sobic004G265400--Sobic003G067300 Sobic004G265400--Sobic003G067500 Sobic004G265400--Sobic003G200501 Sobic004G265400--Sobic002G210200 Sobic001G193400 Sobic001G193400 Sobic004G265400--Sobic001G193400 Sobic002G059200 Sobic002G059200 Sobic004G265400--Sobic002G059200 Sobic001G519300--Sobic007G224600 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G223400 Sobic001G223400 Sobic001G519300--Sobic001G223400 Sobic006G065700 Sobic006G065700 Sobic001G519300--Sobic006G065700 Sobic001G519300--Sobic007G221800 Sobic001G519300--Sobic002G210200 Sobic001G519300--Sobic003G200501 Sobic003G120400 Sobic003G120400 Sobic001G519300--Sobic003G120400 Sobic007G224600--Sobic001G519300 Sobic007G224600--Sobic002G320900 Sobic007G224600--Sobic002G284901 Sobic007G224600--Sobic007G221800 Sobic007G224600--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic007G224600--Sobic001G130900 Sobic007G224600--Sobic003G200501 Sobic007G224600--Sobic007G093400 Sobic007G224600--Sobic006G065700 Sobic007G149600--Sobic004G265400 Sobic007G149600--Sobic007G221800 Sobic007G149600--Sobic003G067300 Sobic007G149600--Sobic003G200501 Sobic007G149600--Sobic002G210200 Sobic007G149600--Sobic003G350100 Sobic007G149600--Sobic003G067500 Sobic007G149600--Sobic002G284901 Sobic007G149600--Sobic001G193400 Sobic003G067500--Sobic003G200501 Sobic003G067500--Sobic002G210200 Sobic003G067500--Sobic003G067300 Sobic003G067500--Sobic002G284901 Sobic003G067500--Sobic007G221800 Sobic003G067500--Sobic002G320900 Sobic003G067500--Sobic004G265400 Sobic001G525000 Sobic001G525000 Sobic003G067500--Sobic001G525000 Sobic003G067500--Sobic003G120400 Sobic003G200501--Sobic002G210200 Sobic003G200501--Sobic003G067500 Sobic003G200501--Sobic002G284901 Sobic003G200501--Sobic002G320900 Sobic003G200501--Sobic003G120400 Sobic003G200501--Sobic001G525000 Sobic003G200501--Sobic003G067300 Sobic003G200501--Sobic007G221800 Sobic003G200501--Sobic007G093400 Sobic002G210200--Sobic003G200501 Sobic002G210200--Sobic003G067500 Sobic002G210200--Sobic002G320900 Sobic002G210200--Sobic002G284901 Sobic002G210200--Sobic001G525000 Sobic002G210200--Sobic003G120400 Sobic002G210200--Sobic007G093400 Sobic002G210200--Sobic003G067300 Sobic002G210200--Sobic007G221800
Octagon: transcription factors


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