Gene annotation
Transcriptome id Sobic.001G193400.1
Synonym Sb01g017040
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5WVD2
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24130 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os10g37400.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a006287
Brachypodium KQJ97469
Barley HORVU1Hr1G047930.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
2 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
3 Sobic.004G265400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
4 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
5 Sobic.003G200501 - K11252: histone H2B
6 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
7 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
8 Sobic.002G387100 X8 domain containing protein, expressed -
9 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
10 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
11 Sobic.003G120400 expressed protein -
12 Sobic.002G059200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
13 Sobic.001G525000 polygalacturonase, putative, expressed -
14 Sobic.002G284901 - -
15 Sobic.007G122300 - -
16 Sobic.003G367401 - -
17 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
18 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.002G403400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
20 Sobic.003G099500 invertase/pectin methylesterase inhibitor family protein, putative, expressed -


Gene co-expression network
sample Sobic001G193400 Sobic001G193400 Sobic003G350100 Sobic003G350100 Sobic001G193400--Sobic003G350100 Sobic003G067300 Sobic003G067300 Sobic001G193400--Sobic003G067300 Sobic004G265400 Sobic004G265400 Sobic001G193400--Sobic004G265400 Sobic007G149600 Sobic007G149600 Sobic001G193400--Sobic007G149600 Sobic003G200501 Sobic003G200501 Sobic001G193400--Sobic003G200501 Sobic003G067500 Sobic003G067500 Sobic001G193400--Sobic003G067500 Sobic002G210200 Sobic002G210200 Sobic001G193400--Sobic002G210200 Sobic002G387100 Sobic002G387100 Sobic001G193400--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G193400--Sobic002G430200 Sobic003G350100--Sobic003G067300 Sobic003G350100--Sobic004G265400 Sobic003G350100--Sobic007G149600 Sobic003G350100--Sobic001G193400 Sobic003G350100--Sobic003G067500 Sobic003G350100--Sobic003G200501 Sobic003G350100--Sobic002G210200 Sobic003G350100--Sobic002G387100 Sobic008G133100 Sobic008G133100 Sobic003G350100--Sobic008G133100 Sobic003G067300--Sobic003G350100 Sobic003G067300--Sobic003G200501 Sobic003G067300--Sobic003G067500 Sobic003G067300--Sobic002G210200 Sobic003G067300--Sobic007G149600 Sobic003G067300--Sobic002G387100 Sobic003G067300--Sobic002G430200 Sobic003G367401 Sobic003G367401 Sobic003G067300--Sobic003G367401 Sobic003G067300--Sobic004G265400 Sobic004G265400--Sobic007G149600 Sobic007G221800 Sobic007G221800 Sobic004G265400--Sobic007G221800 Sobic004G265400--Sobic003G350100 Sobic004G265400--Sobic003G067300 Sobic004G265400--Sobic003G067500 Sobic004G265400--Sobic003G200501 Sobic004G265400--Sobic002G210200 Sobic004G265400--Sobic001G193400 Sobic002G059200 Sobic002G059200 Sobic004G265400--Sobic002G059200 Sobic007G149600--Sobic004G265400 Sobic007G149600--Sobic007G221800 Sobic007G149600--Sobic003G067300 Sobic007G149600--Sobic003G200501 Sobic007G149600--Sobic002G210200 Sobic007G149600--Sobic003G350100 Sobic007G149600--Sobic003G067500 Sobic002G284901 Sobic002G284901 Sobic007G149600--Sobic002G284901 Sobic007G149600--Sobic001G193400 Sobic003G200501--Sobic002G210200 Sobic003G200501--Sobic003G067500 Sobic003G200501--Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic003G200501--Sobic002G320900 Sobic003G120400 Sobic003G120400 Sobic003G200501--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic003G200501--Sobic001G525000 Sobic003G200501--Sobic003G067300 Sobic003G200501--Sobic007G221800 Sobic007G093400 Sobic007G093400 Sobic003G200501--Sobic007G093400 Sobic003G067500--Sobic003G200501 Sobic003G067500--Sobic002G210200 Sobic003G067500--Sobic003G067300 Sobic003G067500--Sobic002G284901 Sobic003G067500--Sobic007G221800 Sobic003G067500--Sobic002G320900 Sobic003G067500--Sobic004G265400 Sobic003G067500--Sobic001G525000 Sobic003G067500--Sobic003G120400 Sobic002G210200--Sobic003G200501 Sobic002G210200--Sobic003G067500 Sobic002G210200--Sobic002G320900 Sobic002G210200--Sobic002G284901 Sobic002G210200--Sobic001G525000 Sobic002G210200--Sobic003G120400 Sobic002G210200--Sobic007G093400 Sobic002G210200--Sobic003G067300 Sobic002G210200--Sobic007G221800 Sobic002G387100--Sobic002G430200 Sobic007G122300 Sobic007G122300 Sobic002G387100--Sobic007G122300 Sobic003G099500 Sobic003G099500 Sobic002G387100--Sobic003G099500 Sobic004G239000 Sobic004G239000 Sobic002G387100--Sobic004G239000 Sobic002G387100--Sobic001G525000 Sobic002G387100--Sobic003G367401 Sobic002G284800 Sobic002G284800 Sobic002G387100--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic002G387100--Sobic003G368150 Sobic002G387100--Sobic003G120400 Sobic002G430200--Sobic002G387100 Sobic002G430200--Sobic007G122300 Sobic002G430200--Sobic003G099500 Sobic002G430200--Sobic003G367401 Sobic002G430200--Sobic001G525000 Sobic002G430200--Sobic004G239000 Sobic002G430200--Sobic003G120400 Sobic010G201000 Sobic010G201000 Sobic002G430200--Sobic010G201000 Sobic002G430200--Sobic002G284800
Octagon: transcription factors


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