Gene annotation
Transcriptome id Sobic.002G140100.1
Synonym Sb02g012890
Functional annotation expressed protein
UniProt C5X6P4
Pfam PF08695
Panther DB PTHR35114 PTHR35114:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20390 : -
RAP-DB (Rice) LOC_Os02g51840.3 : expressed protein
MaizeGDB (Corn) Zm00025a046023
Brachypodium -
Barley HORVU4Hr1G000590.7
Wheat -
Populus -


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cDNA sequences
Sobic.002G140100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G139600 - -
2 Sobic.002G326050 - -
3 Sobic.005G232200 expressed protein -
4 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
5 Sobic.010G206700 expressed protein -
6 Sobic.010G158100 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.002G218200 protein kinase domain containing protein, expressed -
8 Sobic.001G410800 OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed K10878: meiotic recombination protein SPO11
9 Sobic.001G261553 - -
10 Sobic.001G220200 exo70 exocyst complex subunit domain containing protein, expressed -
11 Sobic.010G096801 - -
12 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
13 Sobic.001G535601 - -
14 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -
15 Sobic.004G199000 expressed protein -
16 Sobic.004G357033 - -
17 Sobic.004G357066 - -
18 Sobic.007G224600 - -
19 Sobic.010G158766 - -
20 Sobic.009G004000 - -


Gene co-expression network
sample Sobic002G140100 Sobic002G140100 Sobic001G139600 Sobic001G139600 Sobic002G140100--Sobic001G139600 Sobic002G326050 Sobic002G326050 Sobic002G140100--Sobic002G326050 Sobic005G232200 Sobic005G232200 Sobic002G140100--Sobic005G232200 Sobic006G227800 Sobic006G227800 Sobic002G140100--Sobic006G227800 Sobic010G206700 Sobic010G206700 Sobic002G140100--Sobic010G206700 Sobic010G158100 Sobic010G158100 Sobic002G140100--Sobic010G158100 Sobic002G218200 Sobic002G218200 Sobic002G140100--Sobic002G218200 Sobic001G410800 Sobic001G410800 Sobic002G140100--Sobic001G410800 Sobic001G261553 Sobic001G261553 Sobic002G140100--Sobic001G261553 Sobic001G139600--Sobic005G232200 Sobic001G139600--Sobic002G140100 Sobic001G139600--Sobic002G218200 Sobic001G139600--Sobic010G206700 Sobic001G139600--Sobic010G158100 Sobic001G139600--Sobic001G410800 Sobic001G139600--Sobic002G326050 Sobic001G139600--Sobic001G261553 Sobic001G139600--Sobic006G227800 Sobic002G326050--Sobic002G140100 Sobic002G326050--Sobic010G158100 Sobic002G326050--Sobic001G139600 Sobic002G326050--Sobic006G227800 Sobic001G158000 Sobic001G158000 Sobic002G326050--Sobic001G158000 Sobic001G220200 Sobic001G220200 Sobic002G326050--Sobic001G220200 Sobic001G519300 Sobic001G519300 Sobic002G326050--Sobic001G519300 Sobic002G326050--Sobic002G218200 Sobic004G357033 Sobic004G357033 Sobic002G326050--Sobic004G357033 Sobic005G232200--Sobic001G139600 Sobic005G232200--Sobic002G140100 Sobic005G232200--Sobic010G206700 Sobic005G232200--Sobic002G218200 Sobic004G357066 Sobic004G357066 Sobic005G232200--Sobic004G357066 Sobic005G232200--Sobic006G227800 Sobic005G232200--Sobic001G410800 Sobic005G232200--Sobic010G158100 Sobic005G232200--Sobic001G261553 Sobic006G227800--Sobic002G140100 Sobic006G227800--Sobic001G139600 Sobic006G227800--Sobic002G326050 Sobic006G227800--Sobic001G519300 Sobic006G227800--Sobic002G218200 Sobic006G227800--Sobic005G232200 Sobic006G227800--Sobic001G410800 Sobic006G227800--Sobic001G220200 Sobic006G227800--Sobic010G158100 Sobic010G206700--Sobic001G139600 Sobic010G206700--Sobic002G140100 Sobic006G185400 Sobic006G185400 Sobic010G206700--Sobic006G185400 Sobic004G330500 Sobic004G330500 Sobic010G206700--Sobic004G330500 Sobic005G189400 Sobic005G189400 Sobic010G206700--Sobic005G189400 Sobic010G206700--Sobic005G232200 Sobic001G361500 Sobic001G361500 Sobic010G206700--Sobic001G361500 Sobic002G205201 Sobic002G205201 Sobic010G206700--Sobic002G205201 Sobic007G152200 Sobic007G152200 Sobic010G206700--Sobic007G152200 Sobic010G158100--Sobic001G139600 Sobic010G158100--Sobic002G326050 Sobic010G158100--Sobic002G140100 Sobic010G158100--Sobic002G218200 Sobic010G158100--Sobic001G410800 Sobic010G158100--Sobic001G220200 Sobic010G158100--Sobic005G232200 Sobic010G158766 Sobic010G158766 Sobic010G158100--Sobic010G158766 Sobic001G535601 Sobic001G535601 Sobic010G158100--Sobic001G535601 Sobic002G218200--Sobic001G139600 Sobic002G218200--Sobic001G410800 Sobic002G218200--Sobic001G535601 Sobic002G218200--Sobic002G140100 Sobic002G218200--Sobic005G232200 Sobic002G218200--Sobic010G158100 Sobic010G096801 Sobic010G096801 Sobic002G218200--Sobic010G096801 Sobic002G218200--Sobic004G357033 Sobic002G218200--Sobic006G227800 Sobic001G410800--Sobic001G220200 Sobic001G410800--Sobic004G357033 Sobic001G410800--Sobic002G218200 Sobic001G410800--Sobic010G096801 Sobic001G410800--Sobic001G535601 Sobic001G410800--Sobic001G139600 Sobic001G410800--Sobic010G158766 Sobic010G136601 Sobic010G136601 Sobic001G410800--Sobic010G136601 Sobic001G223400 Sobic001G223400 Sobic001G410800--Sobic001G223400 Sobic004G199000 Sobic004G199000 Sobic001G261553--Sobic004G199000 Sobic009G004000 Sobic009G004000 Sobic001G261553--Sobic009G004000 Sobic001G261553--Sobic004G357066 Sobic001G261553--Sobic010G096801 Sobic001G261553--Sobic001G139600 Sobic001G261553--Sobic005G232200 Sobic001G261553--Sobic002G140100 Sobic004G225450 Sobic004G225450 Sobic001G261553--Sobic004G225450 Sobic001G261553--Sobic001G220200
Octagon: transcription factors


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