Gene annotation
Transcriptome id Sobic.002G218200.1
Synonym Sb02g025985
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1W0W5G0
Pfam PF00069
Panther DB PTHR23257 PTHR23257:SF504
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G31170 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g27150.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ90439
Barley HORVU5Hr1G061460.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G139600 - -
2 Sobic.001G410800 OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed K10878: meiotic recombination protein SPO11
3 Sobic.001G535601 - -
4 Sobic.002G140100 expressed protein -
5 Sobic.005G232200 expressed protein -
6 Sobic.010G158100 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G096801 - -
8 Sobic.004G357033 - -
9 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
10 Sobic.001G220200 exo70 exocyst complex subunit domain containing protein, expressed -
11 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
12 Sobic.001G223400 glucosyltransferase, putative, expressed -
13 Sobic.002G326050 - -
14 Sobic.010G136601 - -
15 Sobic.004G357066 - -
16 Sobic.003G309600 wax synthase, putative, expressed -
17 Sobic.010G158766 - -
18 Sobic.007G224600 - -
19 Sobic.010G206700 expressed protein -
20 Sobic.001G261553 - -


Gene co-expression network
sample Sobic002G218200 Sobic002G218200 Sobic001G139600 Sobic001G139600 Sobic002G218200--Sobic001G139600 Sobic001G410800 Sobic001G410800 Sobic002G218200--Sobic001G410800 Sobic001G535601 Sobic001G535601 Sobic002G218200--Sobic001G535601 Sobic002G140100 Sobic002G140100 Sobic002G218200--Sobic002G140100 Sobic005G232200 Sobic005G232200 Sobic002G218200--Sobic005G232200 Sobic010G158100 Sobic010G158100 Sobic002G218200--Sobic010G158100 Sobic010G096801 Sobic010G096801 Sobic002G218200--Sobic010G096801 Sobic004G357033 Sobic004G357033 Sobic002G218200--Sobic004G357033 Sobic006G227800 Sobic006G227800 Sobic002G218200--Sobic006G227800 Sobic001G139600--Sobic005G232200 Sobic001G139600--Sobic002G140100 Sobic001G139600--Sobic002G218200 Sobic010G206700 Sobic010G206700 Sobic001G139600--Sobic010G206700 Sobic001G139600--Sobic010G158100 Sobic001G139600--Sobic001G410800 Sobic002G326050 Sobic002G326050 Sobic001G139600--Sobic002G326050 Sobic001G261553 Sobic001G261553 Sobic001G139600--Sobic001G261553 Sobic001G139600--Sobic006G227800 Sobic001G220200 Sobic001G220200 Sobic001G410800--Sobic001G220200 Sobic001G410800--Sobic004G357033 Sobic001G410800--Sobic002G218200 Sobic001G410800--Sobic010G096801 Sobic001G410800--Sobic001G535601 Sobic001G410800--Sobic001G139600 Sobic010G158766 Sobic010G158766 Sobic001G410800--Sobic010G158766 Sobic010G136601 Sobic010G136601 Sobic001G410800--Sobic010G136601 Sobic001G223400 Sobic001G223400 Sobic001G410800--Sobic001G223400 Sobic001G535601--Sobic001G410800 Sobic001G535601--Sobic002G218200 Sobic001G535601--Sobic001G139600 Sobic003G224000 Sobic003G224000 Sobic001G535601--Sobic003G224000 Sobic001G535601--Sobic010G158100 Sobic001G535601--Sobic001G220200 Sobic001G535601--Sobic010G136601 Sobic001G535601--Sobic001G223400 Sobic001G535601--Sobic002G140100 Sobic002G140100--Sobic001G139600 Sobic002G140100--Sobic002G326050 Sobic002G140100--Sobic005G232200 Sobic002G140100--Sobic006G227800 Sobic002G140100--Sobic010G206700 Sobic002G140100--Sobic010G158100 Sobic002G140100--Sobic002G218200 Sobic002G140100--Sobic001G410800 Sobic002G140100--Sobic001G261553 Sobic005G232200--Sobic001G139600 Sobic005G232200--Sobic002G140100 Sobic005G232200--Sobic010G206700 Sobic005G232200--Sobic002G218200 Sobic004G357066 Sobic004G357066 Sobic005G232200--Sobic004G357066 Sobic005G232200--Sobic006G227800 Sobic005G232200--Sobic001G410800 Sobic005G232200--Sobic010G158100 Sobic005G232200--Sobic001G261553 Sobic010G158100--Sobic001G139600 Sobic010G158100--Sobic002G326050 Sobic010G158100--Sobic002G140100 Sobic010G158100--Sobic002G218200 Sobic010G158100--Sobic001G410800 Sobic010G158100--Sobic001G220200 Sobic010G158100--Sobic005G232200 Sobic010G158100--Sobic010G158766 Sobic010G158100--Sobic001G535601 Sobic010G096801--Sobic004G357066 Sobic010G096801--Sobic001G220200 Sobic001G206800 Sobic001G206800 Sobic010G096801--Sobic001G206800 Sobic010G096801--Sobic001G410800 Sobic010G096801--Sobic001G261553 Sobic010G096801--Sobic004G357033 Sobic010G096801--Sobic010G158766 Sobic010G096801--Sobic001G139600 Sobic010G096801--Sobic002G218200 Sobic004G344301 Sobic004G344301 Sobic004G357033--Sobic004G344301 Sobic004G357033--Sobic001G220200 Sobic004G225450 Sobic004G225450 Sobic004G357033--Sobic004G225450 Sobic004G357033--Sobic004G357066 Sobic004G357033--Sobic001G410800 Sobic004G357033--Sobic010G136601 Sobic004G357033--Sobic001G223400 Sobic004G357033--Sobic010G158766 Sobic002G285800 Sobic002G285800 Sobic004G357033--Sobic002G285800 Sobic006G227800--Sobic002G140100 Sobic006G227800--Sobic001G139600 Sobic006G227800--Sobic002G326050 Sobic001G519300 Sobic001G519300 Sobic006G227800--Sobic001G519300 Sobic006G227800--Sobic002G218200 Sobic006G227800--Sobic005G232200 Sobic006G227800--Sobic001G410800 Sobic006G227800--Sobic001G220200 Sobic006G227800--Sobic010G158100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.