Gene annotation
Transcriptome id Sobic.010G158766.1
Synonym -
Functional annotation -
UniProt A0A1W0VTB9
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF171
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT5G57750 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os06g34650.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK06449
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G220200 exo70 exocyst complex subunit domain containing protein, expressed -
2 Sobic.004G357033 - -
3 Sobic.001G410800 OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed K10878: meiotic recombination protein SPO11
4 Sobic.010G096801 - -
5 Sobic.004G344301 - -
6 Sobic.009G225300 - -
7 Sobic.006G259201 - -
8 Sobic.010G158100 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.007G224600 - -
10 Sobic.004G357066 - -
11 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
12 Sobic.004G225450 - -
13 Sobic.001G206800 - -
14 Sobic.003G065001 - -
15 Sobic.001G223400 glucosyltransferase, putative, expressed -
16 Sobic.002G218200 protein kinase domain containing protein, expressed -
17 Sobic.003G427500 cytochrome P450, putative, expressed -
18 Sobic.002G326050 - -
19 Sobic.003G126400 expressed protein -
20 Sobic.006G069050 - -


Gene co-expression network
sample Sobic010G158766 Sobic010G158766 Sobic001G220200 Sobic001G220200 Sobic010G158766--Sobic001G220200 Sobic004G357033 Sobic004G357033 Sobic010G158766--Sobic004G357033 Sobic001G410800 Sobic001G410800 Sobic010G158766--Sobic001G410800 Sobic010G096801 Sobic010G096801 Sobic010G158766--Sobic010G096801 Sobic004G344301 Sobic004G344301 Sobic010G158766--Sobic004G344301 Sobic009G225300 Sobic009G225300 Sobic010G158766--Sobic009G225300 Sobic006G259201 Sobic006G259201 Sobic010G158766--Sobic006G259201 Sobic010G158100 Sobic010G158100 Sobic010G158766--Sobic010G158100 Sobic007G224600 Sobic007G224600 Sobic010G158766--Sobic007G224600 Sobic001G220200--Sobic010G158766 Sobic001G220200--Sobic001G410800 Sobic001G220200--Sobic004G357033 Sobic001G220200--Sobic004G344301 Sobic001G220200--Sobic010G096801 Sobic001G220200--Sobic007G224600 Sobic001G519300 Sobic001G519300 Sobic001G220200--Sobic001G519300 Sobic001G220200--Sobic009G225300 Sobic004G357066 Sobic004G357066 Sobic001G220200--Sobic004G357066 Sobic004G357033--Sobic004G344301 Sobic004G357033--Sobic001G220200 Sobic004G225450 Sobic004G225450 Sobic004G357033--Sobic004G225450 Sobic004G357033--Sobic004G357066 Sobic004G357033--Sobic001G410800 Sobic010G136601 Sobic010G136601 Sobic004G357033--Sobic010G136601 Sobic001G223400 Sobic001G223400 Sobic004G357033--Sobic001G223400 Sobic004G357033--Sobic010G158766 Sobic002G285800 Sobic002G285800 Sobic004G357033--Sobic002G285800 Sobic001G410800--Sobic001G220200 Sobic001G410800--Sobic004G357033 Sobic002G218200 Sobic002G218200 Sobic001G410800--Sobic002G218200 Sobic001G410800--Sobic010G096801 Sobic001G535601 Sobic001G535601 Sobic001G410800--Sobic001G535601 Sobic001G139600 Sobic001G139600 Sobic001G410800--Sobic001G139600 Sobic001G410800--Sobic010G158766 Sobic001G410800--Sobic010G136601 Sobic001G410800--Sobic001G223400 Sobic010G096801--Sobic004G357066 Sobic010G096801--Sobic001G220200 Sobic001G206800 Sobic001G206800 Sobic010G096801--Sobic001G206800 Sobic010G096801--Sobic001G410800 Sobic001G261553 Sobic001G261553 Sobic010G096801--Sobic001G261553 Sobic010G096801--Sobic004G357033 Sobic010G096801--Sobic010G158766 Sobic010G096801--Sobic001G139600 Sobic010G096801--Sobic002G218200 Sobic004G344301--Sobic004G357033 Sobic004G344301--Sobic001G220200 Sobic004G344301--Sobic004G357066 Sobic004G344301--Sobic004G225450 Sobic004G344301--Sobic010G158766 Sobic004G344301--Sobic001G223400 Sobic003G427500 Sobic003G427500 Sobic004G344301--Sobic003G427500 Sobic004G344301--Sobic001G519300 Sobic010G074980 Sobic010G074980 Sobic004G344301--Sobic010G074980 Sobic009G225300--Sobic001G220200 Sobic009G225300--Sobic007G224600 Sobic009G225300--Sobic010G158766 Sobic001G115900 Sobic001G115900 Sobic009G225300--Sobic001G115900 Sobic009G198400 Sobic009G198400 Sobic009G225300--Sobic009G198400 Sobic003G126400 Sobic003G126400 Sobic009G225300--Sobic003G126400 Sobic003G065001 Sobic003G065001 Sobic009G225300--Sobic003G065001 Sobic009G225300--Sobic004G225450 Sobic009G225300--Sobic004G357033 Sobic006G259201--Sobic001G220200 Sobic006G259201--Sobic007G224600 Sobic006G259201--Sobic010G158766 Sobic006G259201--Sobic001G410800 Sobic007G221800 Sobic007G221800 Sobic006G259201--Sobic007G221800 Sobic002G320900 Sobic002G320900 Sobic006G259201--Sobic002G320900 Sobic006G259201--Sobic001G519300 Sobic006G259201--Sobic003G065001 Sobic002G210200 Sobic002G210200 Sobic006G259201--Sobic002G210200 Sobic010G158100--Sobic001G139600 Sobic002G326050 Sobic002G326050 Sobic010G158100--Sobic002G326050 Sobic002G140100 Sobic002G140100 Sobic010G158100--Sobic002G140100 Sobic010G158100--Sobic002G218200 Sobic010G158100--Sobic001G410800 Sobic010G158100--Sobic001G220200 Sobic005G232200 Sobic005G232200 Sobic010G158100--Sobic005G232200 Sobic010G158100--Sobic010G158766 Sobic010G158100--Sobic001G535601 Sobic007G224600--Sobic001G519300 Sobic007G224600--Sobic002G320900 Sobic002G284901 Sobic002G284901 Sobic007G224600--Sobic002G284901 Sobic007G224600--Sobic007G221800 Sobic007G224600--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic007G224600--Sobic001G130900 Sobic003G200501 Sobic003G200501 Sobic007G224600--Sobic003G200501 Sobic007G093400 Sobic007G093400 Sobic007G224600--Sobic007G093400 Sobic006G065700 Sobic006G065700 Sobic007G224600--Sobic006G065700
Octagon: transcription factors


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