Gene annotation
Transcriptome id Sobic.006G259201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFK3
Pfam -
Panther DB PTHR31903 PTHR31903:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62422 : -
RAP-DB (Rice) LOC_Os04g57360.1 : expressed protein
MaizeGDB (Corn) Zm00025a009379 , Zm00025a057334
Brachypodium PNT62100
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G220200 exo70 exocyst complex subunit domain containing protein, expressed -
2 Sobic.007G224600 - -
3 Sobic.010G158766 - -
4 Sobic.001G410800 OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed K10878: meiotic recombination protein SPO11
5 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
6 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
7 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
8 Sobic.003G065001 - -
9 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
10 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
11 Sobic.002G284901 - -
12 Sobic.004G357033 - -
13 Sobic.003G200501 - K11252: histone H2B
14 Sobic.001G223400 glucosyltransferase, putative, expressed -
15 Sobic.010G136601 - -
16 Sobic.009G225300 - -
17 Sobic.003G126400 expressed protein -
18 Sobic.007G093400 - -
19 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
20 Sobic.006G069050 - -


Gene co-expression network
sample Sobic006G259201 Sobic006G259201 Sobic001G220200 Sobic001G220200 Sobic006G259201--Sobic001G220200 Sobic007G224600 Sobic007G224600 Sobic006G259201--Sobic007G224600 Sobic010G158766 Sobic010G158766 Sobic006G259201--Sobic010G158766 Sobic001G410800 Sobic001G410800 Sobic006G259201--Sobic001G410800 Sobic007G221800 Sobic007G221800 Sobic006G259201--Sobic007G221800 Sobic002G320900 Sobic002G320900 Sobic006G259201--Sobic002G320900 Sobic001G519300 Sobic001G519300 Sobic006G259201--Sobic001G519300 Sobic003G065001 Sobic003G065001 Sobic006G259201--Sobic003G065001 Sobic002G210200 Sobic002G210200 Sobic006G259201--Sobic002G210200 Sobic001G220200--Sobic010G158766 Sobic001G220200--Sobic001G410800 Sobic004G357033 Sobic004G357033 Sobic001G220200--Sobic004G357033 Sobic004G344301 Sobic004G344301 Sobic001G220200--Sobic004G344301 Sobic010G096801 Sobic010G096801 Sobic001G220200--Sobic010G096801 Sobic001G220200--Sobic007G224600 Sobic001G220200--Sobic001G519300 Sobic009G225300 Sobic009G225300 Sobic001G220200--Sobic009G225300 Sobic004G357066 Sobic004G357066 Sobic001G220200--Sobic004G357066 Sobic007G224600--Sobic001G519300 Sobic007G224600--Sobic002G320900 Sobic002G284901 Sobic002G284901 Sobic007G224600--Sobic002G284901 Sobic007G224600--Sobic007G221800 Sobic007G224600--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic007G224600--Sobic001G130900 Sobic003G200501 Sobic003G200501 Sobic007G224600--Sobic003G200501 Sobic007G093400 Sobic007G093400 Sobic007G224600--Sobic007G093400 Sobic006G065700 Sobic006G065700 Sobic007G224600--Sobic006G065700 Sobic010G158766--Sobic001G220200 Sobic010G158766--Sobic004G357033 Sobic010G158766--Sobic001G410800 Sobic010G158766--Sobic010G096801 Sobic010G158766--Sobic004G344301 Sobic010G158766--Sobic009G225300 Sobic010G158766--Sobic006G259201 Sobic010G158100 Sobic010G158100 Sobic010G158766--Sobic010G158100 Sobic010G158766--Sobic007G224600 Sobic001G410800--Sobic001G220200 Sobic001G410800--Sobic004G357033 Sobic002G218200 Sobic002G218200 Sobic001G410800--Sobic002G218200 Sobic001G410800--Sobic010G096801 Sobic001G535601 Sobic001G535601 Sobic001G410800--Sobic001G535601 Sobic001G139600 Sobic001G139600 Sobic001G410800--Sobic001G139600 Sobic001G410800--Sobic010G158766 Sobic010G136601 Sobic010G136601 Sobic001G410800--Sobic010G136601 Sobic001G223400 Sobic001G223400 Sobic001G410800--Sobic001G223400 Sobic007G149600 Sobic007G149600 Sobic007G221800--Sobic007G149600 Sobic007G221800--Sobic003G200501 Sobic007G221800--Sobic002G210200 Sobic004G265400 Sobic004G265400 Sobic007G221800--Sobic004G265400 Sobic003G067500 Sobic003G067500 Sobic007G221800--Sobic003G067500 Sobic007G221800--Sobic002G284901 Sobic007G221800--Sobic002G320900 Sobic003G067300 Sobic003G067300 Sobic007G221800--Sobic003G067300 Sobic007G221800--Sobic007G093400 Sobic002G320900--Sobic002G284901 Sobic001G525000 Sobic001G525000 Sobic002G320900--Sobic001G525000 Sobic003G120400 Sobic003G120400 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic003G367401 Sobic003G367401 Sobic002G320900--Sobic003G367401 Sobic001G519300--Sobic007G224600 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G519300--Sobic001G223400 Sobic001G519300--Sobic006G065700 Sobic001G519300--Sobic007G221800 Sobic001G519300--Sobic002G210200 Sobic001G519300--Sobic003G200501 Sobic001G519300--Sobic003G120400 Sobic003G065001--Sobic007G093400 Sobic003G065001--Sobic003G367401 Sobic010G201000 Sobic010G201000 Sobic003G065001--Sobic010G201000 Sobic003G065001--Sobic002G320900 Sobic003G065001--Sobic002G210200 Sobic003G065001--Sobic001G525000 Sobic003G065001--Sobic003G200501 Sobic003G065001--Sobic003G120400 Sobic010G074980 Sobic010G074980 Sobic003G065001--Sobic010G074980 Sobic002G210200--Sobic003G200501 Sobic002G210200--Sobic003G067500 Sobic002G210200--Sobic002G320900 Sobic002G210200--Sobic002G284901 Sobic002G210200--Sobic001G525000 Sobic002G210200--Sobic003G120400 Sobic002G210200--Sobic007G093400 Sobic002G210200--Sobic003G067300 Sobic002G210200--Sobic007G221800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.