Gene annotation
Transcriptome id Sobic.001G532300.1,Sobic.001G532300.2
Synonym Sb01g049530
Functional annotation hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5X112 , A0A1B6QQZ6
Pfam PF12695
Panther DB PTHR10992 PTHR10992:SF809
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36290 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g02514.1,LOC_Os03g02514.2 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) Zm00025a053632 , Zm00025a053525
Brachypodium KQJ97498 , KQK23994 , KQK23993
Barley HORVU4Hr1G086270.6 , HORVU4Hr1G086270.5 , HORVU4Hr1G086270.4 , HORVU4Hr1G086270.3 , HORVU4Hr1G086270.2 , HORVU4Hr1G086270.1 , HORVU1Hr1G048530.3 , HORVU1Hr1G048530.2 , HORVU1Hr1G048530.1 , HORVU1Hr1G048530.4
Wheat TraesCS1D02G187100 , TraesCS5A02G526300 , TraesCS5A02G526300 , TraesCS5A02G526300 , TraesCS4B02G356900 , TraesCS4B02G356900 , TraesCS4D02G350700 , TraesCS4D02G350700 , TraesCS4D02G350700 , TraesCS1A02G189300 , TraesCS1B02G197000
Populus -


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cDNA sequences
Sobic.001G532300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
2 Sobic.005G168700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.006G201400 seed specific protein Bn15D1B, putative, expressed -
4 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
5 Sobic.002G371400 stress responsive A/B Barrel domain containing protein, expressed -
6 Sobic.010G214900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
7 Sobic.002G244300 fasciclin domain containing protein, expressed -
8 Sobic.010G162400 reticuline oxidase-like protein precursor, putative, expressed -
9 Sobic.009G121900 Annexin arabidopsis 4(PubMedID : 26320239)@annexin, putative, expressed -
10 Sobic.008G043700 expressed protein -
11 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
12 Sobic.002G128800 fiber protein Fb34, putative, expressed -
13 Sobic.010G005300 ribosomal protein L6, putative, expressed K02940: RP-L9e, large subunit ribosomal protein L9e
14 Sobic.006G278100 expressed protein -
15 Sobic.003G050200 embryo-specific 3, putative, expressed -
16 Sobic.004G293100 phosphatase, putative, expressed -
17 Sobic.001G035600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@induced by either light or pathogen inoculation in the BTx623 seedlings(PubMedID : 20529887)@"The bmr30 mutant harbors a mutation in a phenylpropanoid biosynthetic gene that is key to the interconnection between flavonoids and monolignols, both of which are utilized for lignin synthesis in the grasses."(PubMedID : 34925394)@expressed protein K01859: chalcone isomerase
18 Sobic.001G432000 LYR motif containing protein, putative, expressed -
19 Sobic.001G510800 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
20 Sobic.002G347500 expressed protein -


Gene co-expression network
sample Sobic001G532300 Sobic001G532300 Sobic002G338400 Sobic002G338400 Sobic001G532300--Sobic002G338400 Sobic005G168700 Sobic005G168700 Sobic001G532300--Sobic005G168700 Sobic006G201400 Sobic006G201400 Sobic001G532300--Sobic006G201400 Sobic002G396400 Sobic002G396400 Sobic001G532300--Sobic002G396400 Sobic002G371400 Sobic002G371400 Sobic001G532300--Sobic002G371400 Sobic010G214900 Sobic010G214900 Sobic001G532300--Sobic010G214900 Sobic002G244300 Sobic002G244300 Sobic001G532300--Sobic002G244300 Sobic010G162400 Sobic010G162400 Sobic001G532300--Sobic010G162400 Sobic009G121900 Sobic009G121900 Sobic001G532300--Sobic009G121900 Sobic002G252000 Sobic002G252000 Sobic002G338400--Sobic002G252000 Sobic009G232200 Sobic009G232200 Sobic002G338400--Sobic009G232200 Sobic002G338400--Sobic002G396400 Sobic002G128800 Sobic002G128800 Sobic002G338400--Sobic002G128800 Sobic006G075000 Sobic006G075000 Sobic002G338400--Sobic006G075000 Sobic006G278100 Sobic006G278100 Sobic002G338400--Sobic006G278100 Sobic001G418100 Sobic001G418100 Sobic002G338400--Sobic001G418100 Sobic002G347300 Sobic002G347300 Sobic002G338400--Sobic002G347300 Sobic006G038200 Sobic006G038200 Sobic002G338400--Sobic006G038200 Sobic002G369800 Sobic002G369800 Sobic005G168700--Sobic002G369800 Sobic001G042301 Sobic001G042301 Sobic005G168700--Sobic001G042301 Sobic001G131400 Sobic001G131400 Sobic005G168700--Sobic001G131400 Sobic003G265400 Sobic003G265400 Sobic005G168700--Sobic003G265400 Sobic009G207100 Sobic009G207100 Sobic005G168700--Sobic009G207100 Sobic010G074600 Sobic010G074600 Sobic005G168700--Sobic010G074600 Sobic005G099500 Sobic005G099500 Sobic005G168700--Sobic005G099500 Sobic005G168700--Sobic001G532300 Sobic009G114500 Sobic009G114500 Sobic005G168700--Sobic009G114500 Sobic003G254300 Sobic003G254300 Sobic006G201400--Sobic003G254300 Sobic004G024300 Sobic004G024300 Sobic006G201400--Sobic004G024300 Sobic004G220000 Sobic004G220000 Sobic006G201400--Sobic004G220000 Sobic001G351000 Sobic001G351000 Sobic006G201400--Sobic001G351000 Sobic002G073800 Sobic002G073800 Sobic006G201400--Sobic002G073800 Sobic009G212200 Sobic009G212200 Sobic006G201400--Sobic009G212200 Sobic003G306100 Sobic003G306100 Sobic006G201400--Sobic003G306100 Sobic001G304400 Sobic001G304400 Sobic006G201400--Sobic001G304400 Sobic001G432000 Sobic001G432000 Sobic006G201400--Sobic001G432000 Sobic002G396400--Sobic001G418100 Sobic001G038300 Sobic001G038300 Sobic002G396400--Sobic001G038300 Sobic001G475500 Sobic001G475500 Sobic002G396400--Sobic001G475500 Sobic001G409100 Sobic001G409100 Sobic002G396400--Sobic001G409100 Sobic002G396400--Sobic002G128800 Sobic009G232100 Sobic009G232100 Sobic002G396400--Sobic009G232100 Sobic002G154600 Sobic002G154600 Sobic002G396400--Sobic002G154600 Sobic009G181800 Sobic009G181800 Sobic002G396400--Sobic009G181800 Sobic009G088900 Sobic009G088900 Sobic002G396400--Sobic009G088900 Sobic009G024500 Sobic009G024500 Sobic002G371400--Sobic009G024500 Sobic003G305100 Sobic003G305100 Sobic002G371400--Sobic003G305100 Sobic004G293100 Sobic004G293100 Sobic002G371400--Sobic004G293100 Sobic004G184700 Sobic004G184700 Sobic002G371400--Sobic004G184700 Sobic010G175900 Sobic010G175900 Sobic002G371400--Sobic010G175900 Sobic009G181400 Sobic009G181400 Sobic002G371400--Sobic009G181400 Sobic002G263100 Sobic002G263100 Sobic002G371400--Sobic002G263100 Sobic003G110200 Sobic003G110200 Sobic002G371400--Sobic003G110200 Sobic003G296800 Sobic003G296800 Sobic002G371400--Sobic003G296800 Sobic001G198200 Sobic001G198200 Sobic010G214900--Sobic001G198200 Sobic007G157900 Sobic007G157900 Sobic010G214900--Sobic007G157900 Sobic006G156000 Sobic006G156000 Sobic010G214900--Sobic006G156000 Sobic010G214900--Sobic001G432000 Sobic008G127500 Sobic008G127500 Sobic010G214900--Sobic008G127500 Sobic010G214900--Sobic004G293100 Sobic006G008400 Sobic006G008400 Sobic010G214900--Sobic006G008400 Sobic005G168100 Sobic005G168100 Sobic010G214900--Sobic005G168100 Sobic009G062000 Sobic009G062000 Sobic010G214900--Sobic009G062000 Sobic003G368100 Sobic003G368100 Sobic002G244300--Sobic003G368100 Sobic003G206700 Sobic003G206700 Sobic002G244300--Sobic003G206700 Sobic009G008800 Sobic009G008800 Sobic002G244300--Sobic009G008800 Sobic002G244300--Sobic009G088900 Sobic001G046800 Sobic001G046800 Sobic002G244300--Sobic001G046800 Sobic010G083400 Sobic010G083400 Sobic002G244300--Sobic010G083400 Sobic001G261460 Sobic001G261460 Sobic002G244300--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic002G244300--Sobic010G047600 Sobic008G055100 Sobic008G055100 Sobic002G244300--Sobic008G055100 Sobic001G170700 Sobic001G170700 Sobic010G162400--Sobic001G170700 Sobic004G147400 Sobic004G147400 Sobic010G162400--Sobic004G147400 Sobic001G161601 Sobic001G161601 Sobic010G162400--Sobic001G161601 Sobic009G253300 Sobic009G253300 Sobic010G162400--Sobic009G253300 Sobic007G141200 Sobic007G141200 Sobic010G162400--Sobic007G141200 Sobic010G162400--Sobic002G244300 Sobic001G012400 Sobic001G012400 Sobic010G162400--Sobic001G012400 Sobic001G012500 Sobic001G012500 Sobic010G162400--Sobic001G012500 Sobic010G162400--Sobic002G347300 Sobic002G407100 Sobic002G407100 Sobic009G121900--Sobic002G407100 Sobic007G127100 Sobic007G127100 Sobic009G121900--Sobic007G127100 Sobic004G064400 Sobic004G064400 Sobic009G121900--Sobic004G064400 Sobic010G008400 Sobic010G008400 Sobic009G121900--Sobic010G008400 Sobic002G327300 Sobic002G327300 Sobic009G121900--Sobic002G327300 Sobic009G065300 Sobic009G065300 Sobic009G121900--Sobic009G065300 Sobic009G121900--Sobic003G110200 Sobic001G432700 Sobic001G432700 Sobic009G121900--Sobic001G432700 Sobic003G376100 Sobic003G376100 Sobic009G121900--Sobic003G376100
Octagon: transcription factors


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