Gene annotation
Transcriptome id Sobic.004G293100.1
Synonym Sb04g032700
Functional annotation phosphatase, putative, expressed
UniProt C5Y1H1
Pfam PF01569
Panther DB PTHR14969 PTHR14969:SF13
NCBI CDD KOG4268; Uncharacterized conserved protein containing PAP2 domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22550 : Phosphatidic acid phosphatase (PAP2) family protein
RAP-DB (Rice) LOC_Os02g44290.1 : phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a032227
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.004G293100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G015400 ribosomal protein S6 family protein, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
2 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
3 Sobic.009G024500 50S ribosomal protein L10, chloroplast precursor, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
4 Sobic.004G151400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.003G305100 expressed protein -
6 Sobic.008G021100 ribosomal protein, putative, expressed K02960: RP-S16e, small subunit ribosomal protein S16e
7 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
8 Sobic.007G134900 expressed protein -
9 Sobic.008G127500 expressed protein -
10 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
11 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
12 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
13 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
14 Sobic.001G058900 ribosomal protein S13p/S18e, putative, expressed K02964: RP-S18e, small subunit ribosomal protein S18e
15 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
16 Sobic.009G062000 ribosomal protein L51, putative, expressed K03946: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2
17 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
18 Sobic.004G060500 fiber protein Fb15, putative, expressed -
19 Sobic.009G001900 expressed protein -
20 Sobic.002G308300 expressed protein -


Gene co-expression network
sample Sobic004G293100 Sobic004G293100 Sobic003G015400 Sobic003G015400 Sobic004G293100--Sobic003G015400 Sobic002G263100 Sobic002G263100 Sobic004G293100--Sobic002G263100 Sobic009G024500 Sobic009G024500 Sobic004G293100--Sobic009G024500 Sobic004G151400 Sobic004G151400 Sobic004G293100--Sobic004G151400 Sobic003G305100 Sobic003G305100 Sobic004G293100--Sobic003G305100 Sobic008G021100 Sobic008G021100 Sobic004G293100--Sobic008G021100 Sobic007G177200 Sobic007G177200 Sobic004G293100--Sobic007G177200 Sobic007G134900 Sobic007G134900 Sobic004G293100--Sobic007G134900 Sobic008G127500 Sobic008G127500 Sobic004G293100--Sobic008G127500 Sobic007G034400 Sobic007G034400 Sobic003G015400--Sobic007G034400 Sobic003G015400--Sobic008G021100 Sobic010G005300 Sobic010G005300 Sobic003G015400--Sobic010G005300 Sobic001G202400 Sobic001G202400 Sobic003G015400--Sobic001G202400 Sobic003G015400--Sobic004G293100 Sobic001G510800 Sobic001G510800 Sobic003G015400--Sobic001G510800 Sobic006G281200 Sobic006G281200 Sobic003G015400--Sobic006G281200 Sobic001G058900 Sobic001G058900 Sobic003G015400--Sobic001G058900 Sobic009G062000 Sobic009G062000 Sobic003G015400--Sobic009G062000 Sobic002G263100--Sobic007G134900 Sobic001G047800 Sobic001G047800 Sobic002G263100--Sobic001G047800 Sobic002G309700 Sobic002G309700 Sobic002G263100--Sobic002G309700 Sobic001G519000 Sobic001G519000 Sobic002G263100--Sobic001G519000 Sobic004G260200 Sobic004G260200 Sobic002G263100--Sobic004G260200 Sobic003G296800 Sobic003G296800 Sobic002G263100--Sobic003G296800 Sobic003G215700 Sobic003G215700 Sobic002G263100--Sobic003G215700 Sobic001G286200 Sobic001G286200 Sobic002G263100--Sobic001G286200 Sobic001G404800 Sobic001G404800 Sobic002G263100--Sobic001G404800 Sobic009G024500--Sobic002G263100 Sobic001G031800 Sobic001G031800 Sobic009G024500--Sobic001G031800 Sobic009G024500--Sobic003G296800 Sobic009G024500--Sobic003G305100 Sobic009G024500--Sobic004G260200 Sobic009G077100 Sobic009G077100 Sobic009G024500--Sobic009G077100 Sobic009G024500--Sobic002G309700 Sobic009G024500--Sobic001G047800 Sobic004G060500 Sobic004G060500 Sobic009G024500--Sobic004G060500 Sobic001G131400 Sobic001G131400 Sobic004G151400--Sobic001G131400 Sobic009G131100 Sobic009G131100 Sobic004G151400--Sobic009G131100 Sobic004G151400--Sobic008G127500 Sobic009G114500 Sobic009G114500 Sobic004G151400--Sobic009G114500 Sobic010G135000 Sobic010G135000 Sobic004G151400--Sobic010G135000 Sobic004G151400--Sobic004G293100 Sobic001G339801 Sobic001G339801 Sobic004G151400--Sobic001G339801 Sobic005G011400 Sobic005G011400 Sobic004G151400--Sobic005G011400 Sobic004G265700 Sobic004G265700 Sobic004G151400--Sobic004G265700 Sobic003G277000 Sobic003G277000 Sobic003G305100--Sobic003G277000 Sobic006G231500 Sobic006G231500 Sobic003G305100--Sobic006G231500 Sobic007G091000 Sobic007G091000 Sobic003G305100--Sobic007G091000 Sobic003G305100--Sobic009G062000 Sobic002G296200 Sobic002G296200 Sobic003G305100--Sobic002G296200 Sobic001G095632 Sobic001G095632 Sobic003G305100--Sobic001G095632 Sobic002G260200 Sobic002G260200 Sobic003G305100--Sobic002G260200 Sobic003G305100--Sobic009G024500 Sobic001G538600 Sobic001G538600 Sobic003G305100--Sobic001G538600 Sobic008G021100--Sobic001G058900 Sobic002G115000 Sobic002G115000 Sobic008G021100--Sobic002G115000 Sobic006G221200 Sobic006G221200 Sobic008G021100--Sobic006G221200 Sobic002G049300 Sobic002G049300 Sobic008G021100--Sobic002G049300 Sobic008G135000 Sobic008G135000 Sobic008G021100--Sobic008G135000 Sobic009G233400 Sobic009G233400 Sobic008G021100--Sobic009G233400 Sobic001G085400 Sobic001G085400 Sobic008G021100--Sobic001G085400 Sobic008G021100--Sobic001G510800 Sobic001G334300 Sobic001G334300 Sobic008G021100--Sobic001G334300 Sobic007G177200--Sobic002G296200 Sobic007G177200--Sobic008G127500 Sobic007G177200--Sobic003G215700 Sobic001G342200 Sobic001G342200 Sobic007G177200--Sobic001G342200 Sobic003G129800 Sobic003G129800 Sobic007G177200--Sobic003G129800 Sobic007G177200--Sobic001G058900 Sobic004G066800 Sobic004G066800 Sobic007G177200--Sobic004G066800 Sobic001G057300 Sobic001G057300 Sobic007G177200--Sobic001G057300 Sobic007G177200--Sobic001G286200 Sobic007G134900--Sobic002G296200 Sobic007G134900--Sobic002G263100 Sobic007G134900--Sobic001G519000 Sobic007G134900--Sobic001G047800 Sobic007G134900--Sobic003G215700 Sobic009G223300 Sobic009G223300 Sobic007G134900--Sobic009G223300 Sobic007G134900--Sobic001G286200 Sobic007G134900--Sobic002G309700 Sobic009G173500 Sobic009G173500 Sobic007G134900--Sobic009G173500 Sobic010G018400 Sobic010G018400 Sobic008G127500--Sobic010G018400 Sobic010G054200 Sobic010G054200 Sobic008G127500--Sobic010G054200 Sobic001G304400 Sobic001G304400 Sobic008G127500--Sobic001G304400 Sobic008G127500--Sobic007G177200 Sobic010G065400 Sobic010G065400 Sobic008G127500--Sobic010G065400 Sobic008G127500--Sobic003G129800 Sobic003G368500 Sobic003G368500 Sobic008G127500--Sobic003G368500 Sobic008G127500--Sobic001G058900 Sobic001G172000 Sobic001G172000 Sobic008G127500--Sobic001G172000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.