Gene annotation
Transcriptome id Sobic.005G168700.1
Synonym KCS20
Functional annotation 3-ketoacyl-CoA synthase, putative, expressed
UniProt A0A1B6PT04
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF25
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G04220 : 3-ketoacyl-CoA synthase 2
RAP-DB (Rice) LOC_Os11g37900.1 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) Zm00025a036645 , Zm00025a020257 , Zm00025a001551 , Zm00025a042702 , Zm00025a029505 , Zm00025a044614 , Zm00025a044659 , Zm00025a028878 , Zm00025a052892 , Zm00025a001341 , Zm00025a000774 , Zm00025a028880
Brachypodium KQK04750 , KQJ96727 , KQJ88016 , KQK18680 , KQK18679 , KQK01599 , KQK23304 , KQK08195
Barley HORVU4Hr1G076940.1 , HORVU4Hr1G067340.4 , HORVU1Hr1G089710.1 , HORVU1Hr1G089710.2 , HORVU1Hr1G089710.3 , HORVU7Hr1G042070.2 , HORVU7Hr1G042070.3 , HORVU7Hr1G042070.1 , HORVU4Hr1G072960.1 , HORVU7Hr1G084610.10 , HORVU7Hr1G084610.11 , HORVU4Hr1G067340.2 , HORVU4Hr1G067340.3 , HORVU4Hr1G067340.1 , HORVU7Hr1G084610.1 , HORVU7Hr1G084610.2 , HORVU7Hr1G084610.3 , HORVU7Hr1G084610.4 , HORVU7Hr1G084610.5 , HORVU7Hr1G084610.6 , HORVU7Hr1G084610.7 , HORVU7Hr1G084610.8 , HORVU7Hr1G084610.9 , HORVU1Hr1G090730.1 , HORVU4Hr1G076940.4 , HORVU4Hr1G076940.3 , HORVU4Hr1G063420.5 , HORVU4Hr1G063420.3 , HORVU4Hr1G063420.2 , HORVU4Hr1G063420.1
Wheat TraesCS7B02G449000 , TraesCS4D02G296400 , TraesCS4A02G065300 , TraesCS6D02G071600 , TraesCS4D02G242200 , TraesCS6A02G073300 , TraesCS4A02G164400 , TraesCS6B02G473900 , TraesCS6B02G098300 , TraesCS4D02G148300 , TraesCS4B02G297500 , TraesCS6A02G415500 , TraesCS6A02G415500 , TraesCS4A02G007400
Populus -


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cDNA sequences
Sobic.005G168700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G369800 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
2 Sobic.001G042301 - -
3 Sobic.001G131400 thioesterase family protein, putative, expressed -
4 Sobic.003G265400 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
5 Sobic.009G207100 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
6 Sobic.010G074600 expressed protein -
7 Sobic.005G099500 nucleoside-triphosphatase, putative, expressed K14641: apyrase
8 Sobic.001G532300 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.009G114500 thiamin pyrophosphokinase 1, putative, expressed K00949: thiN, TPK1, thiamine pyrophosphokinase
10 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
11 Sobic.004G293100 phosphatase, putative, expressed -
12 Sobic.006G210800 coproporphyrinogen III oxidase, chloroplast precursor, putative, expressed K00228: CPOX, coproporphyrinogen III oxidase
13 Sobic.002G371400 stress responsive A/B Barrel domain containing protein, expressed -
14 Sobic.003G341600 prenylated rab acceptor, putative, expressed -
15 Sobic.008G043700 expressed protein -
16 Sobic.003G015400 ribosomal protein S6 family protein, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
17 Sobic.001G170700 OsSub30 - Putative Subtilisin homologue, expressed -
18 Sobic.001G189900 expressed protein -
19 Sobic.007G162300 OsGrx_S12 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
20 Sobic.002G370000 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic005G168700 Sobic005G168700 Sobic002G369800 Sobic002G369800 Sobic005G168700--Sobic002G369800 Sobic001G042301 Sobic001G042301 Sobic005G168700--Sobic001G042301 Sobic001G131400 Sobic001G131400 Sobic005G168700--Sobic001G131400 Sobic003G265400 Sobic003G265400 Sobic005G168700--Sobic003G265400 Sobic009G207100 Sobic009G207100 Sobic005G168700--Sobic009G207100 Sobic010G074600 Sobic010G074600 Sobic005G168700--Sobic010G074600 Sobic005G099500 Sobic005G099500 Sobic005G168700--Sobic005G099500 Sobic001G532300 Sobic001G532300 Sobic005G168700--Sobic001G532300 Sobic009G114500 Sobic009G114500 Sobic005G168700--Sobic009G114500 Sobic002G369800--Sobic001G131400 Sobic002G369800--Sobic005G168700 Sobic003G271201 Sobic003G271201 Sobic002G369800--Sobic003G271201 Sobic003G400200 Sobic003G400200 Sobic002G369800--Sobic003G400200 Sobic006G168300 Sobic006G168300 Sobic002G369800--Sobic006G168300 Sobic009G232266 Sobic009G232266 Sobic002G369800--Sobic009G232266 Sobic001G032000 Sobic001G032000 Sobic002G369800--Sobic001G032000 Sobic001G093900 Sobic001G093900 Sobic002G369800--Sobic001G093900 Sobic001G234800 Sobic001G234800 Sobic002G369800--Sobic001G234800 Sobic001G206200 Sobic001G206200 Sobic001G042301--Sobic001G206200 Sobic007G023300 Sobic007G023300 Sobic001G042301--Sobic007G023300 Sobic001G407900 Sobic001G407900 Sobic001G042301--Sobic001G407900 Sobic004G193400 Sobic004G193400 Sobic001G042301--Sobic004G193400 Sobic004G234200 Sobic004G234200 Sobic001G042301--Sobic004G234200 Sobic008G117400 Sobic008G117400 Sobic001G042301--Sobic008G117400 Sobic002G414400 Sobic002G414400 Sobic001G042301--Sobic002G414400 Sobic001G065500 Sobic001G065500 Sobic001G042301--Sobic001G065500 Sobic002G338000 Sobic002G338000 Sobic001G042301--Sobic002G338000 Sobic006G180200 Sobic006G180200 Sobic001G131400--Sobic006G180200 Sobic001G353600 Sobic001G353600 Sobic001G131400--Sobic001G353600 Sobic010G178200 Sobic010G178200 Sobic001G131400--Sobic010G178200 Sobic009G038100 Sobic009G038100 Sobic001G131400--Sobic009G038100 Sobic001G074300 Sobic001G074300 Sobic001G131400--Sobic001G074300 Sobic009G176000 Sobic009G176000 Sobic001G131400--Sobic009G176000 Sobic004G151400 Sobic004G151400 Sobic001G131400--Sobic004G151400 Sobic008G189300 Sobic008G189300 Sobic001G131400--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic001G131400--Sobic010G135000 Sobic004G217600 Sobic004G217600 Sobic003G265400--Sobic004G217600 Sobic003G369500 Sobic003G369500 Sobic003G265400--Sobic003G369500 Sobic009G131100 Sobic009G131100 Sobic003G265400--Sobic009G131100 Sobic001G193200 Sobic001G193200 Sobic003G265400--Sobic001G193200 Sobic003G265400--Sobic005G168700 Sobic003G265400--Sobic001G131400 Sobic006G281200 Sobic006G281200 Sobic003G265400--Sobic006G281200 Sobic003G291400 Sobic003G291400 Sobic003G265400--Sobic003G291400 Sobic006G206700 Sobic006G206700 Sobic003G265400--Sobic006G206700 Sobic002G133100 Sobic002G133100 Sobic009G207100--Sobic002G133100 Sobic001G215500 Sobic001G215500 Sobic009G207100--Sobic001G215500 Sobic007G171950 Sobic007G171950 Sobic009G207100--Sobic007G171950 Sobic001G202400 Sobic001G202400 Sobic009G207100--Sobic001G202400 Sobic005G055000 Sobic005G055000 Sobic009G207100--Sobic005G055000 Sobic002G333100 Sobic002G333100 Sobic009G207100--Sobic002G333100 Sobic001G263000 Sobic001G263000 Sobic009G207100--Sobic001G263000 Sobic003G071600 Sobic003G071600 Sobic009G207100--Sobic003G071600 Sobic004G224700 Sobic004G224700 Sobic009G207100--Sobic004G224700 Sobic010G074600--Sobic005G099500 Sobic001G012300 Sobic001G012300 Sobic010G074600--Sobic001G012300 Sobic001G012600 Sobic001G012600 Sobic010G074600--Sobic001G012600 Sobic006G210800 Sobic006G210800 Sobic010G074600--Sobic006G210800 Sobic001G012200 Sobic001G012200 Sobic010G074600--Sobic001G012200 Sobic006G084500 Sobic006G084500 Sobic010G074600--Sobic006G084500 Sobic010G074600--Sobic005G168700 Sobic007G181000 Sobic007G181000 Sobic010G074600--Sobic007G181000 Sobic009G180800 Sobic009G180800 Sobic010G074600--Sobic009G180800 Sobic005G099500--Sobic010G074600 Sobic009G070800 Sobic009G070800 Sobic005G099500--Sobic009G070800 Sobic001G315200 Sobic001G315200 Sobic005G099500--Sobic001G315200 Sobic006G103900 Sobic006G103900 Sobic005G099500--Sobic006G103900 Sobic009G009500 Sobic009G009500 Sobic005G099500--Sobic009G009500 Sobic005G099500--Sobic005G168700 Sobic008G076401 Sobic008G076401 Sobic005G099500--Sobic008G076401 Sobic008G049200 Sobic008G049200 Sobic005G099500--Sobic008G049200 Sobic005G099500--Sobic001G012600 Sobic002G338400 Sobic002G338400 Sobic001G532300--Sobic002G338400 Sobic001G532300--Sobic005G168700 Sobic006G201400 Sobic006G201400 Sobic001G532300--Sobic006G201400 Sobic002G396400 Sobic002G396400 Sobic001G532300--Sobic002G396400 Sobic002G371400 Sobic002G371400 Sobic001G532300--Sobic002G371400 Sobic010G214900 Sobic010G214900 Sobic001G532300--Sobic010G214900 Sobic002G244300 Sobic002G244300 Sobic001G532300--Sobic002G244300 Sobic010G162400 Sobic010G162400 Sobic001G532300--Sobic010G162400 Sobic009G121900 Sobic009G121900 Sobic001G532300--Sobic009G121900 Sobic009G114500--Sobic004G151400 Sobic009G114500--Sobic001G131400 Sobic002G073800 Sobic002G073800 Sobic009G114500--Sobic002G073800 Sobic004G196300 Sobic004G196300 Sobic009G114500--Sobic004G196300 Sobic009G062000 Sobic009G062000 Sobic009G114500--Sobic009G062000 Sobic010G237000 Sobic010G237000 Sobic009G114500--Sobic010G237000 Sobic002G335300 Sobic002G335300 Sobic009G114500--Sobic002G335300 Sobic010G018400 Sobic010G018400 Sobic009G114500--Sobic010G018400 Sobic004G293100 Sobic004G293100 Sobic009G114500--Sobic004G293100
Octagon: transcription factors


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