Gene annotation
Transcriptome id Sobic.002G370000.1
Synonym AtCXE18, CXE18, Sb02g038880
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5XDX8
Pfam PF12695
Panther DB PTHR23024:SF155 PTHR23024
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23530 : carboxyesterase 18
RAP-DB (Rice) LOC_Os07g41590.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a048958 , Zm00025a048712
Brachypodium KQK14952 , KQK14951 , KQK15317 , KQJ98620
Barley HORVU0Hr1G022260.2 , HORVU5Hr1G069140.1 , HORVU0Hr1G013170.1 , HORVU5Hr1G069110.1 , HORVU0Hr1G013140.2 , HORVU0Hr1G013140.1 , HORVU0Hr1G022260.1 , HORVU5Hr1G017510.3 , HORVU5Hr1G017510.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G242600 expressed protein -
2 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
3 Sobic.002G190800 expressed protein -
4 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
6 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
7 Sobic.006G280050 - K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
8 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
9 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
10 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
11 Sobic.009G180800 aminotransferase, putative, expressed K01845: glutamate-1-semialdehyde 2,1-aminomutase
12 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
13 Sobic.008G107800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SWIB/MDM2 domain containing protein, expressed -
14 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
15 Sobic.003G383500 rhodanese-like, putative, expressed -
16 Sobic.004G191200 PsbQ-like protein 1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3, identical, putative, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
17 Sobic.002G297900 CDGSH iron sulfur domain-containing protein 1, putative, expressed -
18 Sobic.002G353300 Geranilgeranil pyrophosphate synthetase 1 GGPS1 (Os)(PubMedID : 27208977)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
19 Sobic.001G323801 - -
20 Sobic.005G228100 expressed protein -


Gene co-expression network
sample Sobic002G370000 Sobic002G370000 Sobic002G242600 Sobic002G242600 Sobic002G370000--Sobic002G242600 Sobic004G044000 Sobic004G044000 Sobic002G370000--Sobic004G044000 Sobic002G190800 Sobic002G190800 Sobic002G370000--Sobic002G190800 Sobic004G314800 Sobic004G314800 Sobic002G370000--Sobic004G314800 Sobic001G065500 Sobic001G065500 Sobic002G370000--Sobic001G065500 Sobic007G034500 Sobic007G034500 Sobic002G370000--Sobic007G034500 Sobic006G280050 Sobic006G280050 Sobic002G370000--Sobic006G280050 Sobic008G123600 Sobic008G123600 Sobic002G370000--Sobic008G123600 Sobic001G120000 Sobic001G120000 Sobic002G370000--Sobic001G120000 Sobic002G242600--Sobic004G044000 Sobic007G013400 Sobic007G013400 Sobic002G242600--Sobic007G013400 Sobic003G030900 Sobic003G030900 Sobic002G242600--Sobic003G030900 Sobic003G383500 Sobic003G383500 Sobic002G242600--Sobic003G383500 Sobic009G001500 Sobic009G001500 Sobic002G242600--Sobic009G001500 Sobic002G190100 Sobic002G190100 Sobic002G242600--Sobic002G190100 Sobic001G027600 Sobic001G027600 Sobic002G242600--Sobic001G027600 Sobic001G475600 Sobic001G475600 Sobic002G242600--Sobic001G475600 Sobic006G248200 Sobic006G248200 Sobic002G242600--Sobic006G248200 Sobic004G044000--Sobic001G027600 Sobic001G383900 Sobic001G383900 Sobic004G044000--Sobic001G383900 Sobic004G044000--Sobic006G280050 Sobic004G044000--Sobic009G001500 Sobic004G044000--Sobic003G030900 Sobic004G044000--Sobic007G013400 Sobic004G044000--Sobic002G242600 Sobic001G076500 Sobic001G076500 Sobic004G044000--Sobic001G076500 Sobic004G044000--Sobic007G034500 Sobic002G190800--Sobic004G044000 Sobic010G012900 Sobic010G012900 Sobic002G190800--Sobic010G012900 Sobic001G172300 Sobic001G172300 Sobic002G190800--Sobic001G172300 Sobic002G190800--Sobic007G034500 Sobic002G190800--Sobic001G383900 Sobic003G392000 Sobic003G392000 Sobic002G190800--Sobic003G392000 Sobic002G190800--Sobic001G120000 Sobic001G357200 Sobic001G357200 Sobic002G190800--Sobic001G357200 Sobic001G188600 Sobic001G188600 Sobic002G190800--Sobic001G188600 Sobic002G305700 Sobic002G305700 Sobic004G314800--Sobic002G305700 Sobic004G314800--Sobic006G248200 Sobic004G314800--Sobic006G280050 Sobic006G111600 Sobic006G111600 Sobic004G314800--Sobic006G111600 Sobic003G328200 Sobic003G328200 Sobic004G314800--Sobic003G328200 Sobic007G171800 Sobic007G171800 Sobic004G314800--Sobic007G171800 Sobic002G131700 Sobic002G131700 Sobic004G314800--Sobic002G131700 Sobic004G314800--Sobic007G034500 Sobic003G330100 Sobic003G330100 Sobic004G314800--Sobic003G330100 Sobic001G065500--Sobic003G328200 Sobic001G065500--Sobic006G280050 Sobic001G065500--Sobic004G314800 Sobic001G191000 Sobic001G191000 Sobic001G065500--Sobic001G191000 Sobic009G028400 Sobic009G028400 Sobic001G065500--Sobic009G028400 Sobic010G265500 Sobic010G265500 Sobic001G065500--Sobic010G265500 Sobic006G107600 Sobic006G107600 Sobic001G065500--Sobic006G107600 Sobic003G187000 Sobic003G187000 Sobic001G065500--Sobic003G187000 Sobic001G240000 Sobic001G240000 Sobic001G065500--Sobic001G240000 Sobic007G034500--Sobic007G171800 Sobic007G034500--Sobic004G044000 Sobic007G034500--Sobic006G280050 Sobic004G191200 Sobic004G191200 Sobic007G034500--Sobic004G191200 Sobic007G034500--Sobic001G357200 Sobic007G034500--Sobic009G001500 Sobic007G034500--Sobic001G383900 Sobic007G034500--Sobic001G191000 Sobic007G034500--Sobic001G027600 Sobic006G280050--Sobic001G191000 Sobic006G280050--Sobic001G027600 Sobic003G246400 Sobic003G246400 Sobic006G280050--Sobic003G246400 Sobic006G280050--Sobic004G044000 Sobic006G280050--Sobic004G191200 Sobic004G317900 Sobic004G317900 Sobic006G280050--Sobic004G317900 Sobic001G017000 Sobic001G017000 Sobic006G280050--Sobic001G017000 Sobic006G280050--Sobic001G076500 Sobic001G453300 Sobic001G453300 Sobic006G280050--Sobic001G453300 Sobic004G076000 Sobic004G076000 Sobic008G123600--Sobic004G076000 Sobic003G383600 Sobic003G383600 Sobic008G123600--Sobic003G383600 Sobic001G003600 Sobic001G003600 Sobic008G123600--Sobic001G003600 Sobic001G323801 Sobic001G323801 Sobic008G123600--Sobic001G323801 Sobic001G069500 Sobic001G069500 Sobic008G123600--Sobic001G069500 Sobic001G435600 Sobic001G435600 Sobic008G123600--Sobic001G435600 Sobic009G115050 Sobic009G115050 Sobic008G123600--Sobic009G115050 Sobic003G295800 Sobic003G295800 Sobic008G123600--Sobic003G295800 Sobic006G172700 Sobic006G172700 Sobic008G123600--Sobic006G172700 Sobic001G120000--Sobic004G044000 Sobic001G120000--Sobic004G191200 Sobic001G120000--Sobic002G190800 Sobic006G263800 Sobic006G263800 Sobic001G120000--Sobic006G263800 Sobic001G120000--Sobic002G190100 Sobic004G017200 Sobic004G017200 Sobic001G120000--Sobic004G017200 Sobic001G120000--Sobic002G305700 Sobic001G120000--Sobic001G027600 Sobic001G255400 Sobic001G255400 Sobic001G120000--Sobic001G255400
Octagon: transcription factors


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