Gene annotation
Transcriptome id Sobic.005G228100.1,Sobic.005G228100.2
Synonym Sb05g027610
Functional annotation expressed protein
UniProt C5Y8K0
Pfam -
Panther DB PTHR34054 PTHR34054:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59350 : -
RAP-DB (Rice) LOC_Os11g47730.2 : expressed protein
MaizeGDB (Corn) Zm00025a029095 , Zm00025a043054
Brachypodium -
Barley HORVU4Hr1G028050.2 , HORVU4Hr1G028050.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G370000 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.004G253800 - -
3 Sobic.008G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.006G204100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
5 Sobic.006G114300 pentatricopeptide, putative, expressed -
6 Sobic.002G242600 expressed protein -
7 Sobic.002G190800 expressed protein -
8 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
9 Sobic.001G172300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed -
10 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
11 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
12 Sobic.009G161100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
14 Sobic.003G261200 formyl transferase, putative, expressed K00604: MTFMT, methionyl-tRNA formyltransferase
15 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
16 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.007G034500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DAG protein, chloroplast precursor, putative, expressed -
18 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
19 Sobic.004G191200 PsbQ-like protein 1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3, identical, putative, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
20 Sobic.003G383500 rhodanese-like, putative, expressed -


Gene co-expression network
sample Sobic005G228100 Sobic005G228100 Sobic002G370000 Sobic002G370000 Sobic005G228100--Sobic002G370000 Sobic004G253800 Sobic004G253800 Sobic005G228100--Sobic004G253800 Sobic008G072300 Sobic008G072300 Sobic005G228100--Sobic008G072300 Sobic006G204100 Sobic006G204100 Sobic005G228100--Sobic006G204100 Sobic006G114300 Sobic006G114300 Sobic005G228100--Sobic006G114300 Sobic002G242600 Sobic002G242600 Sobic005G228100--Sobic002G242600 Sobic002G190800 Sobic002G190800 Sobic005G228100--Sobic002G190800 Sobic004G044000 Sobic004G044000 Sobic005G228100--Sobic004G044000 Sobic001G172300 Sobic001G172300 Sobic005G228100--Sobic001G172300 Sobic002G370000--Sobic002G242600 Sobic002G370000--Sobic004G044000 Sobic002G370000--Sobic002G190800 Sobic004G314800 Sobic004G314800 Sobic002G370000--Sobic004G314800 Sobic001G065500 Sobic001G065500 Sobic002G370000--Sobic001G065500 Sobic007G034500 Sobic007G034500 Sobic002G370000--Sobic007G034500 Sobic006G280050 Sobic006G280050 Sobic002G370000--Sobic006G280050 Sobic008G123600 Sobic008G123600 Sobic002G370000--Sobic008G123600 Sobic001G120000 Sobic001G120000 Sobic002G370000--Sobic001G120000 Sobic005G200600 Sobic005G200600 Sobic004G253800--Sobic005G200600 Sobic003G157500 Sobic003G157500 Sobic004G253800--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic004G253800--Sobic005G020200 Sobic001G188600 Sobic001G188600 Sobic004G253800--Sobic001G188600 Sobic006G025700 Sobic006G025700 Sobic004G253800--Sobic006G025700 Sobic009G059100 Sobic009G059100 Sobic004G253800--Sobic009G059100 Sobic009G001500 Sobic009G001500 Sobic004G253800--Sobic009G001500 Sobic001G357200 Sobic001G357200 Sobic004G253800--Sobic001G357200 Sobic004G253800--Sobic006G114300 Sobic008G072300--Sobic006G204100 Sobic003G330100 Sobic003G330100 Sobic008G072300--Sobic003G330100 Sobic003G221700 Sobic003G221700 Sobic008G072300--Sobic003G221700 Sobic009G234200 Sobic009G234200 Sobic008G072300--Sobic009G234200 Sobic006G111600 Sobic006G111600 Sobic008G072300--Sobic006G111600 Sobic002G345200 Sobic002G345200 Sobic008G072300--Sobic002G345200 Sobic008G072300--Sobic007G034500 Sobic010G074200 Sobic010G074200 Sobic008G072300--Sobic010G074200 Sobic004G250200 Sobic004G250200 Sobic008G072300--Sobic004G250200 Sobic006G204100--Sobic010G074200 Sobic006G204100--Sobic008G072300 Sobic001G388400 Sobic001G388400 Sobic006G204100--Sobic001G388400 Sobic006G204100--Sobic009G234200 Sobic006G204100--Sobic003G330100 Sobic009G233800 Sobic009G233800 Sobic006G204100--Sobic009G233800 Sobic010G028000 Sobic010G028000 Sobic006G204100--Sobic010G028000 Sobic007G227600 Sobic007G227600 Sobic006G204100--Sobic007G227600 Sobic006G204100--Sobic004G250200 Sobic006G114300--Sobic001G188600 Sobic006G114300--Sobic001G357200 Sobic004G109000 Sobic004G109000 Sobic006G114300--Sobic004G109000 Sobic001G069500 Sobic001G069500 Sobic006G114300--Sobic001G069500 Sobic010G012900 Sobic010G012900 Sobic006G114300--Sobic010G012900 Sobic003G383500 Sobic003G383500 Sobic006G114300--Sobic003G383500 Sobic006G114300--Sobic004G253800 Sobic007G211100 Sobic007G211100 Sobic006G114300--Sobic007G211100 Sobic007G013400 Sobic007G013400 Sobic006G114300--Sobic007G013400 Sobic002G242600--Sobic004G044000 Sobic002G242600--Sobic007G013400 Sobic003G030900 Sobic003G030900 Sobic002G242600--Sobic003G030900 Sobic002G242600--Sobic003G383500 Sobic002G242600--Sobic009G001500 Sobic002G190100 Sobic002G190100 Sobic002G242600--Sobic002G190100 Sobic001G027600 Sobic001G027600 Sobic002G242600--Sobic001G027600 Sobic001G475600 Sobic001G475600 Sobic002G242600--Sobic001G475600 Sobic006G248200 Sobic006G248200 Sobic002G242600--Sobic006G248200 Sobic002G190800--Sobic004G044000 Sobic002G190800--Sobic010G012900 Sobic002G190800--Sobic001G172300 Sobic002G190800--Sobic007G034500 Sobic001G383900 Sobic001G383900 Sobic002G190800--Sobic001G383900 Sobic003G392000 Sobic003G392000 Sobic002G190800--Sobic003G392000 Sobic002G190800--Sobic001G120000 Sobic002G190800--Sobic001G357200 Sobic002G190800--Sobic001G188600 Sobic004G044000--Sobic001G027600 Sobic004G044000--Sobic001G383900 Sobic004G044000--Sobic006G280050 Sobic004G044000--Sobic009G001500 Sobic004G044000--Sobic003G030900 Sobic004G044000--Sobic007G013400 Sobic004G044000--Sobic002G242600 Sobic001G076500 Sobic001G076500 Sobic004G044000--Sobic001G076500 Sobic004G044000--Sobic007G034500 Sobic001G172300--Sobic010G012900 Sobic001G347800 Sobic001G347800 Sobic001G172300--Sobic001G347800 Sobic001G172300--Sobic003G392000 Sobic001G172300--Sobic001G188600 Sobic001G172300--Sobic002G190800 Sobic001G172300--Sobic006G114300 Sobic002G360200 Sobic002G360200 Sobic001G172300--Sobic002G360200 Sobic001G172300--Sobic001G357200 Sobic001G172300--Sobic004G253800
Octagon: transcription factors


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