Gene annotation
Transcriptome id Sobic.007G162300.1
Synonym Sb07g023540
Functional annotation OsGrx_S12 - glutaredoxin subgroup I, expressed
UniProt A0A1Z5RAS2
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF14
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology K03676; grxC, GLRX, glutaredoxin 3
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT4G28730 : Glutaredoxin family protein
RAP-DB (Rice) LOC_Os08g45140.1 : OsGrx_S12 - glutaredoxin subgroup I, expressed
MaizeGDB (Corn) Zm00025a030487
Brachypodium KQJ94708
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G162300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G527100 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
2 Sobic.002G198000 CRR6, putative, expressed -
3 Sobic.004G164100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.002G251400 expressed protein -
5 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
6 Sobic.002G288300 Chorophyll a/b binding protein 1(PubMedID : 26186930)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
7 Sobic.001G240000 ribosomal protein L28 protein, putative, expressed K02902: RP-L28, MRPL28, large subunit ribosomal protein L28
8 Sobic.010G095200 glutathione S-transferase, N-terminal domain containing protein, expressed -
9 Sobic.001G531200 methylthioribose kinase, putative, expressed -
10 Sobic.003G150600 pectinacetylesterase domain containing protein, expressed -
11 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
12 Sobic.001G040000 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
13 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
14 Sobic.001G065500 ZOS3-19 - C2H2 zinc finger protein, expressed -
15 Sobic.003G386300 expressed protein -
16 Sobic.009G130800 tat pathway signal sequence family protein, expressed -
17 Sobic.001G104800 expressed protein -
18 Sobic.001G122400 ribosomal protein S13p/S18e, putative, expressed K02952: RP-S13, small subunit ribosomal protein S13
19 Sobic.003G261200 formyl transferase, putative, expressed K00604: MTFMT, methionyl-tRNA formyltransferase
20 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase


Gene co-expression network
sample Sobic007G162300 Sobic007G162300 Sobic001G527100 Sobic001G527100 Sobic007G162300--Sobic001G527100 Sobic002G198000 Sobic002G198000 Sobic007G162300--Sobic002G198000 Sobic004G164100 Sobic004G164100 Sobic007G162300--Sobic004G164100 Sobic002G251400 Sobic002G251400 Sobic007G162300--Sobic002G251400 Sobic003G328200 Sobic003G328200 Sobic007G162300--Sobic003G328200 Sobic002G288300 Sobic002G288300 Sobic007G162300--Sobic002G288300 Sobic001G240000 Sobic001G240000 Sobic007G162300--Sobic001G240000 Sobic010G095200 Sobic010G095200 Sobic007G162300--Sobic010G095200 Sobic001G531200 Sobic001G531200 Sobic007G162300--Sobic001G531200 Sobic001G527100--Sobic001G240000 Sobic001G122400 Sobic001G122400 Sobic001G527100--Sobic001G122400 Sobic001G527100--Sobic002G198000 Sobic004G335800 Sobic004G335800 Sobic001G527100--Sobic004G335800 Sobic003G386300 Sobic003G386300 Sobic001G527100--Sobic003G386300 Sobic001G527100--Sobic004G164100 Sobic001G391400 Sobic001G391400 Sobic001G527100--Sobic001G391400 Sobic001G040000 Sobic001G040000 Sobic001G527100--Sobic001G040000 Sobic001G527100--Sobic003G328200 Sobic002G198000--Sobic004G164100 Sobic002G198000--Sobic001G527100 Sobic002G198000--Sobic001G122400 Sobic002G198000--Sobic003G386300 Sobic002G198000--Sobic001G240000 Sobic002G198000--Sobic004G335800 Sobic001G469933 Sobic001G469933 Sobic002G198000--Sobic001G469933 Sobic002G198000--Sobic002G251400 Sobic002G198000--Sobic010G095200 Sobic004G164100--Sobic002G198000 Sobic004G164100--Sobic001G527100 Sobic004G164100--Sobic003G386300 Sobic004G164100--Sobic002G251400 Sobic004G164100--Sobic001G240000 Sobic004G164100--Sobic001G122400 Sobic004G164100--Sobic010G095200 Sobic004G164100--Sobic004G335800 Sobic004G326500 Sobic004G326500 Sobic004G164100--Sobic004G326500 Sobic002G251400--Sobic001G040000 Sobic002G251400--Sobic004G164100 Sobic002G251400--Sobic001G240000 Sobic002G251400--Sobic003G386300 Sobic002G251400--Sobic001G122400 Sobic002G251400--Sobic004G335800 Sobic002G251400--Sobic001G527100 Sobic007G013400 Sobic007G013400 Sobic002G251400--Sobic007G013400 Sobic003G295800 Sobic003G295800 Sobic002G251400--Sobic003G295800 Sobic003G328200--Sobic001G527100 Sobic003G328200--Sobic001G040000 Sobic004G317900 Sobic004G317900 Sobic003G328200--Sobic004G317900 Sobic003G246400 Sobic003G246400 Sobic003G328200--Sobic003G246400 Sobic003G328200--Sobic001G240000 Sobic003G328200--Sobic003G295800 Sobic004G116100 Sobic004G116100 Sobic003G328200--Sobic004G116100 Sobic004G311100 Sobic004G311100 Sobic003G328200--Sobic004G311100 Sobic003G328200--Sobic003G386300 Sobic009G091800 Sobic009G091800 Sobic002G288300--Sobic009G091800 Sobic010G022100 Sobic010G022100 Sobic002G288300--Sobic010G022100 Sobic010G000500 Sobic010G000500 Sobic002G288300--Sobic010G000500 Sobic004G234200 Sobic004G234200 Sobic002G288300--Sobic004G234200 Sobic002G338000 Sobic002G338000 Sobic002G288300--Sobic002G338000 Sobic002G414400 Sobic002G414400 Sobic002G288300--Sobic002G414400 Sobic010G011800 Sobic010G011800 Sobic002G288300--Sobic010G011800 Sobic004G193400 Sobic004G193400 Sobic002G288300--Sobic004G193400 Sobic006G264900 Sobic006G264900 Sobic002G288300--Sobic006G264900 Sobic001G240000--Sobic001G527100 Sobic001G240000--Sobic001G040000 Sobic001G240000--Sobic001G122400 Sobic001G240000--Sobic003G386300 Sobic001G240000--Sobic001G391400 Sobic001G240000--Sobic002G251400 Sobic001G240000--Sobic004G335800 Sobic001G240000--Sobic003G328200 Sobic001G240000--Sobic002G198000 Sobic010G095200--Sobic003G386300 Sobic010G095200--Sobic001G122400 Sobic010G095200--Sobic001G240000 Sobic007G090537 Sobic007G090537 Sobic010G095200--Sobic007G090537 Sobic010G095200--Sobic004G164100 Sobic010G095200--Sobic001G527100 Sobic010G095200--Sobic002G251400 Sobic010G095200--Sobic002G198000 Sobic009G130800 Sobic009G130800 Sobic010G095200--Sobic009G130800 Sobic006G248200 Sobic006G248200 Sobic001G531200--Sobic006G248200 Sobic001G531200--Sobic003G386300 Sobic001G531200--Sobic001G240000 Sobic001G531200--Sobic001G527100 Sobic001G475600 Sobic001G475600 Sobic001G531200--Sobic001G475600 Sobic001G333000 Sobic001G333000 Sobic001G531200--Sobic001G333000 Sobic001G531200--Sobic001G040000 Sobic002G198600 Sobic002G198600 Sobic001G531200--Sobic002G198600 Sobic001G531200--Sobic001G122400
Octagon: transcription factors


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