Gene annotation
Transcriptome id Sobic.002G371400.5,Sobic.002G371400.3,Sobic.002G371400.1,Sobic.002G371400.2,Sobic.002G371400.4,Sobic.002G371400.6
Synonym Sb02g039020
Functional annotation stress responsive A/B Barrel domain containing protein, expressed
UniProt A0A1B6QFH9
Pfam PF07876
Panther DB PTHR33178 PTHR33178:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31670 : Stress responsive alpha-beta barrel domain protein
RAP-DB (Rice) LOC_Os07g41810.4,LOC_Os07g41810.1,LOC_Os07g41810.3 : stress responsive A/B Barrel domain containing protein, expressed
MaizeGDB (Corn) Zm00025a048726
Brachypodium KQK15291
Barley HORVU2Hr1G031910.4 , HORVU2Hr1G031910.5 , HORVU2Hr1G031910.2 , HORVU2Hr1G031910.3
Wheat -
Populus -


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cDNA sequences
Sobic.002G371400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G024500 50S ribosomal protein L10, chloroplast precursor, putative, expressed K02864: RP-L10, MRPL10, large subunit ribosomal protein L10
2 Sobic.003G305100 expressed protein -
3 Sobic.004G293100 phosphatase, putative, expressed -
4 Sobic.004G184700 expressed protein -
5 Sobic.010G175900 peptide transporter PTR2, putative, expressed -
6 Sobic.009G181400 expressed protein -
7 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
8 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
9 Sobic.003G296800 expressed protein -
10 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.004G060500 fiber protein Fb15, putative, expressed -
12 Sobic.001G536500 expressed protein -
13 Sobic.009G234000 expressed protein -
14 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
15 Sobic.004G183200 expressed protein -
16 Sobic.009G232900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
17 Sobic.004G233400 - -
18 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
19 Sobic.001G134200 expressed protein -
20 Sobic.001G131400 thioesterase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G371400 Sobic002G371400 Sobic009G024500 Sobic009G024500 Sobic002G371400--Sobic009G024500 Sobic003G305100 Sobic003G305100 Sobic002G371400--Sobic003G305100 Sobic004G293100 Sobic004G293100 Sobic002G371400--Sobic004G293100 Sobic004G184700 Sobic004G184700 Sobic002G371400--Sobic004G184700 Sobic010G175900 Sobic010G175900 Sobic002G371400--Sobic010G175900 Sobic009G181400 Sobic009G181400 Sobic002G371400--Sobic009G181400 Sobic002G263100 Sobic002G263100 Sobic002G371400--Sobic002G263100 Sobic003G110200 Sobic003G110200 Sobic002G371400--Sobic003G110200 Sobic003G296800 Sobic003G296800 Sobic002G371400--Sobic003G296800 Sobic009G024500--Sobic002G263100 Sobic001G031800 Sobic001G031800 Sobic009G024500--Sobic001G031800 Sobic009G024500--Sobic003G296800 Sobic009G024500--Sobic003G305100 Sobic004G260200 Sobic004G260200 Sobic009G024500--Sobic004G260200 Sobic009G077100 Sobic009G077100 Sobic009G024500--Sobic009G077100 Sobic002G309700 Sobic002G309700 Sobic009G024500--Sobic002G309700 Sobic001G047800 Sobic001G047800 Sobic009G024500--Sobic001G047800 Sobic004G060500 Sobic004G060500 Sobic009G024500--Sobic004G060500 Sobic003G277000 Sobic003G277000 Sobic003G305100--Sobic003G277000 Sobic006G231500 Sobic006G231500 Sobic003G305100--Sobic006G231500 Sobic007G091000 Sobic007G091000 Sobic003G305100--Sobic007G091000 Sobic009G062000 Sobic009G062000 Sobic003G305100--Sobic009G062000 Sobic002G296200 Sobic002G296200 Sobic003G305100--Sobic002G296200 Sobic001G095632 Sobic001G095632 Sobic003G305100--Sobic001G095632 Sobic002G260200 Sobic002G260200 Sobic003G305100--Sobic002G260200 Sobic003G305100--Sobic009G024500 Sobic001G538600 Sobic001G538600 Sobic003G305100--Sobic001G538600 Sobic003G015400 Sobic003G015400 Sobic004G293100--Sobic003G015400 Sobic004G293100--Sobic002G263100 Sobic004G293100--Sobic009G024500 Sobic004G151400 Sobic004G151400 Sobic004G293100--Sobic004G151400 Sobic004G293100--Sobic003G305100 Sobic008G021100 Sobic008G021100 Sobic004G293100--Sobic008G021100 Sobic007G177200 Sobic007G177200 Sobic004G293100--Sobic007G177200 Sobic007G134900 Sobic007G134900 Sobic004G293100--Sobic007G134900 Sobic008G127500 Sobic008G127500 Sobic004G293100--Sobic008G127500 Sobic004G184700--Sobic002G371400 Sobic004G184700--Sobic009G181400 Sobic002G369500 Sobic002G369500 Sobic004G184700--Sobic002G369500 Sobic003G265400 Sobic003G265400 Sobic004G184700--Sobic003G265400 Sobic008G181300 Sobic008G181300 Sobic004G184700--Sobic008G181300 Sobic002G070200 Sobic002G070200 Sobic004G184700--Sobic002G070200 Sobic002G138700 Sobic002G138700 Sobic004G184700--Sobic002G138700 Sobic001G088300 Sobic001G088300 Sobic004G184700--Sobic001G088300 Sobic004G186500 Sobic004G186500 Sobic004G184700--Sobic004G186500 Sobic009G234000 Sobic009G234000 Sobic010G175900--Sobic009G234000 Sobic010G267600 Sobic010G267600 Sobic010G175900--Sobic010G267600 Sobic003G063200 Sobic003G063200 Sobic010G175900--Sobic003G063200 Sobic001G536500 Sobic001G536500 Sobic010G175900--Sobic001G536500 Sobic001G449700 Sobic001G449700 Sobic010G175900--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic010G175900--Sobic003G202200 Sobic010G175900--Sobic003G110200 Sobic004G247200 Sobic004G247200 Sobic010G175900--Sobic004G247200 Sobic007G149300 Sobic007G149300 Sobic010G175900--Sobic007G149300 Sobic009G181400--Sobic001G088300 Sobic001G510600 Sobic001G510600 Sobic009G181400--Sobic001G510600 Sobic003G102200 Sobic003G102200 Sobic009G181400--Sobic003G102200 Sobic002G405600 Sobic002G405600 Sobic009G181400--Sobic002G405600 Sobic009G181400--Sobic003G202200 Sobic009G181400--Sobic003G110200 Sobic002G092801 Sobic002G092801 Sobic009G181400--Sobic002G092801 Sobic001G295700 Sobic001G295700 Sobic009G181400--Sobic001G295700 Sobic001G204900 Sobic001G204900 Sobic009G181400--Sobic001G204900 Sobic002G263100--Sobic007G134900 Sobic002G263100--Sobic001G047800 Sobic002G263100--Sobic002G309700 Sobic001G519000 Sobic001G519000 Sobic002G263100--Sobic001G519000 Sobic002G263100--Sobic004G260200 Sobic002G263100--Sobic003G296800 Sobic003G215700 Sobic003G215700 Sobic002G263100--Sobic003G215700 Sobic001G286200 Sobic001G286200 Sobic002G263100--Sobic001G286200 Sobic001G404800 Sobic001G404800 Sobic002G263100--Sobic001G404800 Sobic003G110200--Sobic001G449700 Sobic003G110200--Sobic003G202200 Sobic003G110200--Sobic007G149300 Sobic003G110200--Sobic002G092801 Sobic003G110200--Sobic003G102200 Sobic001G383700 Sobic001G383700 Sobic003G110200--Sobic001G383700 Sobic001G481100 Sobic001G481100 Sobic003G110200--Sobic001G481100 Sobic003G021500 Sobic003G021500 Sobic003G110200--Sobic003G021500 Sobic005G186100 Sobic005G186100 Sobic003G110200--Sobic005G186100 Sobic003G296800--Sobic001G047800 Sobic003G296800--Sobic003G215700 Sobic003G296800--Sobic002G263100 Sobic003G296800--Sobic002G296200 Sobic004G183200 Sobic004G183200 Sobic003G296800--Sobic004G183200 Sobic003G296800--Sobic001G404800 Sobic006G262300 Sobic006G262300 Sobic003G296800--Sobic006G262300 Sobic003G296800--Sobic002G309700 Sobic003G296800--Sobic004G060500
Octagon: transcription factors


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