Gene annotation
Transcriptome id Sobic.001G131400.2
Synonym Sb01g011520
Functional annotation thioesterase family protein, putative, expressed
UniProt A0A1Z5S5G9
Pfam PF03061
Panther DB PTHR12418 PTHR12418:SF33
NCBI CDD KOG3328; HGG motif-containing thioesterase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G48320 : Thioesterase superfamily protein
RAP-DB (Rice) LOC_Os03g48480.1 : thioesterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a017087
Brachypodium -
Barley HORVU3Hr1G013400.1 , HORVU3Hr1G013400.3 , HORVU3Hr1G013400.2 , HORVU7Hr1G051410.1 , HORVU3Hr1G108410.1 , HORVU3Hr1G108410.2 , HORVU6Hr1G076630.2 , HORVU6Hr1G076630.3 , HORVU6Hr1G076630.1 , HORVU7Hr1G098340.2 , HORVU7Hr1G098340.1 , HORVU4Hr1G004990.4 , HORVU4Hr1G004990.5 , HORVU4Hr1G004990.6 , HORVU4Hr1G004990.7 , HORVU4Hr1G004990.1 , HORVU4Hr1G004990.2 , HORVU4Hr1G004990.3 , HORVU4Hr1G004990.8
Wheat TraesCS4A02G282100 , TraesCS4A02G281800 , TraesCS4B02G031200 , TraesCS3D02G072800 , TraesCS5A02G003900 , TraesCS5A02G003900 , TraesCS3A02G073000 , TraesCS3B02G087000 , TraesCS4A02G282200
Populus -


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cDNA sequences
Sobic.001G131400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
2 Sobic.001G353600 expressed protein -
3 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
4 Sobic.009G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G074300 40S ribosomal protein S29, putative, expressed K02980: RP-S29e, small subunit ribosomal protein S29e
6 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
7 Sobic.004G151400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
9 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
10 Sobic.001G339801 - -
11 Sobic.001G034700 actin-depolymerizing factor, putative, expressed K05765: cofilin
12 Sobic.001G087900 expressed protein -
13 Sobic.010G041600 profilin domain containing protein, expressed K05759: profilin
14 Sobic.008G113000 Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.003G144900 expressed protein -
16 Sobic.004G026400 expressed protein -
17 Sobic.002G386500 expressed protein -
18 Sobic.010G009300 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
19 Sobic.001G086300 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
20 Sobic.003G341600 prenylated rab acceptor, putative, expressed -


Gene co-expression network
sample Sobic001G131400 Sobic001G131400 Sobic006G180200 Sobic006G180200 Sobic001G131400--Sobic006G180200 Sobic001G353600 Sobic001G353600 Sobic001G131400--Sobic001G353600 Sobic010G178200 Sobic010G178200 Sobic001G131400--Sobic010G178200 Sobic009G038100 Sobic009G038100 Sobic001G131400--Sobic009G038100 Sobic001G074300 Sobic001G074300 Sobic001G131400--Sobic001G074300 Sobic009G176000 Sobic009G176000 Sobic001G131400--Sobic009G176000 Sobic004G151400 Sobic004G151400 Sobic001G131400--Sobic004G151400 Sobic008G189300 Sobic008G189300 Sobic001G131400--Sobic008G189300 Sobic010G135000 Sobic010G135000 Sobic001G131400--Sobic010G135000 Sobic003G130800 Sobic003G130800 Sobic006G180200--Sobic003G130800 Sobic006G180200--Sobic010G135000 Sobic009G185800 Sobic009G185800 Sobic006G180200--Sobic009G185800 Sobic004G055200 Sobic004G055200 Sobic006G180200--Sobic004G055200 Sobic006G180200--Sobic001G131400 Sobic008G033600 Sobic008G033600 Sobic006G180200--Sobic008G033600 Sobic004G187900 Sobic004G187900 Sobic006G180200--Sobic004G187900 Sobic003G181500 Sobic003G181500 Sobic006G180200--Sobic003G181500 Sobic006G180200--Sobic008G189300 Sobic010G041600 Sobic010G041600 Sobic001G353600--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic001G353600--Sobic001G034700 Sobic001G087900 Sobic001G087900 Sobic001G353600--Sobic001G087900 Sobic004G225500 Sobic004G225500 Sobic001G353600--Sobic004G225500 Sobic010G121300 Sobic010G121300 Sobic001G353600--Sobic010G121300 Sobic004G351500 Sobic004G351500 Sobic001G353600--Sobic004G351500 Sobic001G353600--Sobic001G131400 Sobic004G308400 Sobic004G308400 Sobic001G353600--Sobic004G308400 Sobic001G536500 Sobic001G536500 Sobic001G353600--Sobic001G536500 Sobic002G345300 Sobic002G345300 Sobic010G178200--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic010G178200--Sobic003G285800 Sobic003G350300 Sobic003G350300 Sobic010G178200--Sobic003G350300 Sobic010G178200--Sobic010G041600 Sobic010G178200--Sobic001G034700 Sobic001G281400 Sobic001G281400 Sobic010G178200--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic009G038100--Sobic010G274900 Sobic003G041600 Sobic003G041600 Sobic009G038100--Sobic003G041600 Sobic003G144900 Sobic003G144900 Sobic009G038100--Sobic003G144900 Sobic002G224500 Sobic002G224500 Sobic009G038100--Sobic002G224500 Sobic010G213700 Sobic010G213700 Sobic009G038100--Sobic010G213700 Sobic009G198000 Sobic009G198000 Sobic009G038100--Sobic009G198000 Sobic007G025500 Sobic007G025500 Sobic009G038100--Sobic007G025500 Sobic004G075000 Sobic004G075000 Sobic009G038100--Sobic004G075000 Sobic009G038100--Sobic001G131400 Sobic006G047400 Sobic006G047400 Sobic001G074300--Sobic006G047400 Sobic001G374700 Sobic001G374700 Sobic001G074300--Sobic001G374700 Sobic009G163800 Sobic009G163800 Sobic001G074300--Sobic009G163800 Sobic006G106100 Sobic006G106100 Sobic001G074300--Sobic006G106100 Sobic001G091801 Sobic001G091801 Sobic001G074300--Sobic001G091801 Sobic002G175100 Sobic002G175100 Sobic001G074300--Sobic002G175100 Sobic007G212600 Sobic007G212600 Sobic001G074300--Sobic007G212600 Sobic009G166500 Sobic009G166500 Sobic001G074300--Sobic009G166500 Sobic001G340500 Sobic001G340500 Sobic001G074300--Sobic001G340500 Sobic002G398901 Sobic002G398901 Sobic009G176000--Sobic002G398901 Sobic007G051000 Sobic007G051000 Sobic009G176000--Sobic007G051000 Sobic006G083500 Sobic006G083500 Sobic009G176000--Sobic006G083500 Sobic010G012500 Sobic010G012500 Sobic009G176000--Sobic010G012500 Sobic004G211833 Sobic004G211833 Sobic009G176000--Sobic004G211833 Sobic002G190900 Sobic002G190900 Sobic009G176000--Sobic002G190900 Sobic004G060500 Sobic004G060500 Sobic009G176000--Sobic004G060500 Sobic002G418400 Sobic002G418400 Sobic009G176000--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic009G176000--Sobic003G215700 Sobic004G151400--Sobic001G131400 Sobic009G131100 Sobic009G131100 Sobic004G151400--Sobic009G131100 Sobic008G127500 Sobic008G127500 Sobic004G151400--Sobic008G127500 Sobic009G114500 Sobic009G114500 Sobic004G151400--Sobic009G114500 Sobic004G151400--Sobic010G135000 Sobic004G293100 Sobic004G293100 Sobic004G151400--Sobic004G293100 Sobic001G339801 Sobic001G339801 Sobic004G151400--Sobic001G339801 Sobic005G011400 Sobic005G011400 Sobic004G151400--Sobic005G011400 Sobic004G265700 Sobic004G265700 Sobic004G151400--Sobic004G265700 Sobic008G189300--Sobic004G225500 Sobic004G272800 Sobic004G272800 Sobic008G189300--Sobic004G272800 Sobic001G224400 Sobic001G224400 Sobic008G189300--Sobic001G224400 Sobic002G153500 Sobic002G153500 Sobic008G189300--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic008G189300--Sobic010G154700 Sobic001G132100 Sobic001G132100 Sobic008G189300--Sobic001G132100 Sobic002G187500 Sobic002G187500 Sobic008G189300--Sobic002G187500 Sobic001G048832 Sobic001G048832 Sobic008G189300--Sobic001G048832 Sobic008G189300--Sobic001G340500 Sobic010G135000--Sobic003G130800 Sobic010G135000--Sobic006G180200 Sobic010G135000--Sobic002G345300 Sobic010G135000--Sobic003G181500 Sobic001G459200 Sobic001G459200 Sobic010G135000--Sobic001G459200 Sobic009G023200 Sobic009G023200 Sobic010G135000--Sobic009G023200 Sobic010G135000--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic010G135000--Sobic004G330700 Sobic010G135000--Sobic009G185800
Octagon: transcription factors


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